Oreochromis aureus (blue tilapia): 116319435
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Entry
116319435 CDS
T07295
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116319435 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oau04990
]
116319435 (snx27a)
Membrane trafficking [BR:
oau04131
]
Protein recycling
Others
Others
116319435 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
oau04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116319435 (snx27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
VirE3
SNX17_FERM_C
SNX17-31_F2_FERM
PDZ_2
USP7_C2
DarA_N
Motif
Other DBs
NCBI-GeneID:
116319435
NCBI-ProteinID:
XP_031594620
Ensembl:
ENSOABG00000007489
UniProt:
A0A668SNN7
LinkDB
All DBs
Position
LG22:23568380..23583126
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AA seq
563 aa
AA seq
DB search
MADVGGDETRPVLPSASRNGPVVGSSAGTAGHGAAMVTSGPRMVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGIVKGDRILEVNGVNVEGATHKQVVDL
IRAGEKELVLAVLSVPPQEADGLEGGEEVQPNYDYSDKQAVPISIPTYKHVEQHSERFVV
YNVYMSGRQLCSKRYREFAILHQNLKREFSNFNFPKLPGKWPFSLSEQQLDARRRGLEEY
LERVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNSTTDQVYQ
ALVLKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLF
SFQEEELLRDNPLALHYCFHQALDDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLRTCE
GYNEVVFPHCSCDSRRKGHVITAISINHFKLHACTEDGTLENQVIAFEWGEMQRWDTDEE
GMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERIFCELKWRKQVEEEASDKDNKNCSNN
EFLPPLETQQKGWRHLGGEIATS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtaggaggcgatgaaactcggcccgttctcccttcggcatcccgtaacggt
ccggttgtcggttcgtcggctggcaccgcgggccacggcgcagcaatggtcacatcggga
ccgcggatggtcaggatcgtcaagtcggagtccggctacgggttcaatgtccgcggtcaa
gtgagcgaaggaggacagcttcggagcatcaacggggagctgtacgcccctcttcagcat
gtcagcgctgttttacccggaggtgctgcggaccgagccgggatagtgaagggtgacagg
atcctggaggttaatggcgtgaacgtggaaggtgcaactcataagcaggtggtggacctg
atccgtgctggggagaaggagctggttctggctgtgctgtctgttccacctcaggaggct
gacggtttggaaggaggagaggaagtccagcccaactacgactacagtgacaagcaggcc
gtgcccatttctattcccacatacaagcacgtagaacagcactccgagaggtttgtggta
tacaatgtgtatatgtcagggaggcagctgtgttcaaaacgctatcgtgagtttgccatc
ctgcaccagaacctgaaaagggaattctccaacttcaacttcccaaagcttcctggtaaa
tggcccttctccctctcggaacagcagctggatgcacgacgtagaggcttggaggaatat
ctcgagcgagtgtgctctgtgcgggtgattggggagagtgacatcatgcaggagtttctc
tcggaatcagatgagaactacaacggagtgacagatgtagaactgcggatagccctacca
gacaagaccaccatctccgtcagagtccgtaagaacagtaccacagaccaggtgtatcag
gcattagtgttgaaggttgggatggacagtattatggcgagctactttgctctgtttgaa
gttatcaaccactcctttgtgcggaagctggcgcccaatgagtttccccacaagctatat
gtgcagaactacacgtcggccgtcccggggacctgcttagcactccgcaaatggttgttc
agcttccaggaggaggagttgctcagagacaatccgctggcactgcactactgctttcac
caggcactggatgatgtgaagaagggattcataaaaacagaggacaaatcctaccagctg
cagaaactggcagagcagcgcaagatggccacgtacctgagcctattgcggacatgcgag
ggctacaacgaggtggtcttcccccactgctcttgtgactccagaaggaagggccacgtc
atcacagcgatcagcatcaatcacttcaagttgcatgcttgcactgaggacggcacgctg
gagaaccaggtaatagcttttgagtggggggagatgcagcgctgggacacggacgaggag
gggatggctttctgctttgagtatgccagaggagagaagaaacctcgctgggtcaagatc
ttcactccgtatttcaactacatgcacgagtgctttgagcggatcttttgtgagctgaag
tggaggaaacaggttgaggaagaagcgtccgataaagacaacaaaaactgcagcaacaac
gagtttctgcctcctctggagacacagcaaaagggatggcgccacctagggggggagatt
gcaacttcctaa
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