KEGG   Oreochromis aureus (blue tilapia): 116319471
Entry
116319471         CDS       T07295                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03050  Proteasome
oau03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    116319471 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    116319471 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oau03019]
    116319471 (sem1)
   04131 Membrane trafficking [BR:oau04131]
    116319471 (sem1)
   03051 Proteasome [BR:oau03051]
    116319471 (sem1)
   03400 DNA repair and recombination proteins [BR:oau03400]
    116319471 (sem1)
Messenger RNA biogenesis [BR:oau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     116319471 (sem1)
Membrane trafficking [BR:oau04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    116319471 (sem1)
Proteasome [BR:oau03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     116319471 (sem1)
DNA repair and recombination proteins [BR:oau03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     116319471 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 116319471
NCBI-ProteinID: XP_031594674
Ensembl: ENSOABG00000014510
UniProt: A0AAZ1WWV0
LinkDB
Position
LG22:15983408..15986401
AA seq 70 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagacaagaagcagaccgtagatctgggcttgctggaggaagatgatgagtttgaa
gaattcccagctgaggactggacagggctggatgaagacgaagacgctcatgtttgggaa
gataactgggacgatgacaacgtagaagatgatttctcaaatcagctgagagcggagctt
gaaaaacatggttacaagatggagacatcatag

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