Oreochromis aureus (blue tilapia): 116319610
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Entry
116319610 CDS
T07295
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X2
KO
K10841
DNA excision repair protein ERCC-6
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116319610 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116319610 (ercc6)
03400 DNA repair and recombination proteins [BR:
oau03400
]
116319610 (ercc6)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116319610 (ercc6)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
116319610 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
DegQ
DEAD
Motif
Other DBs
NCBI-GeneID:
116319610
NCBI-ProteinID:
XP_031594852
Ensembl:
ENSOABG00000010128
LinkDB
All DBs
Position
LG13
Genome browser
AA seq
1437 aa
AA seq
DB search
MPVDGTEDQVPSSLSSPASAALTPGGTEEDGATGGSAVCTFPENSQAPEAAAAYPANTGP
GEGNSAGKRSGALLQIDRQRIQAASASSGADELQGLGVAVYDQHILEQGVLQQVDEAIQE
ASQAAVKAEAEKEYQSVLDDVRSVTASLKHINKIIEQLSPYAASSKDISRKIESVKRQKE
NKEKQLKKVRAKQKRLQAILGGEDTQRVEFEFLAEDDGEEEAGPSTLGSMLMPSQETEWE
ELIRKGHMTPFGTRIQQKEVKKEPRKLMLAENSAFDQYLADQAKLATERKRVPLLKKKKS
SGVGDSREKTKRTVSSSKDKKLRKRMRKLQITALKAHPKARPKAEPQLQKQRRKRHTEGE
ETDSEGSEYLPSDEGIDPDQEEREAMEEGFGYDDDEEYELKPYKRKTEGKGRKKVKKSDS
EEEYHPESTDEEDDDKGKPKKYKDDGDVEYYRQRIRRWKRQRLREREEKRERGEELTDDS
DAEFDEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVISFLAGL
SYSKLRTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPLFRVAVLHETGSFTSNKEK
LIPEIAACHGILITSYSAVRNMQETLQLYDWHYIILDEGHKIRNPNAGVTVACKQFRTPH
RFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAFK
CACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSKEVYQIL
NGDMQVFSGLIALRKICNHPDLFSGGPRILRGIPEDQLTEEEHFGFWKRSGKLIVVESLL
RLWFRQSHRVLLFTQSRQMLDILEVFVRENNYSYLKMDGTTTISSRQPLIARYNEDKSIF
IFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYRLLTAGTI
EEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLADPDGGQGTETSAIFAGTGSD
VKAPKKPEKPKPSHKENHSSHAPKHSSASCINTVTDSTHTPALRAGSTSPCSKNSQGKQN
VPIDSPSTNQVAVDIAPAGQNNNSDCDAAKPDTNTSNSASFHQHRGKNSARTSPQKHREK
RKHCDSDDLDKRKHKKHKRSRDARFEGHRISHLVKKRTYKKSESEDNAAEDQKKSDDYVL
AKLFKKSGIHSVMQHDTIIESSNPDYVLVEAEANRVAQDALKALKISRQQCRLRFNRTPP
PAKKRFGQKKNSLLATPSVQSVPTSTKCKDAAIIKKSVSKKPGSGAHFSGEGAESDSNST
PLSSSSLLARMKARNHLSMPSRGEEPEEEEEDASGAAGSLPAAPPTEHDELLVDLRNFVA
FQASVDGQATTQEVLEYFKPRLTQEQAPVFRELLRSICDFHRTSGQEGIWRLKESFR
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagacggtacagaggaccaggtgccctcctctctctctagcccggctagtgcg
gccctcaccccgggagggacggaggaggatggagctacaggcggctcagcagtctgtact
ttccctgaaaacagtcaggccccggaggctgctgcagcctatcctgccaacactggacct
ggggagggcaacagcgctgggaaaaggtctggagccttgctgcagattgaccgacagcgc
atccaagcagcttctgccagttcgggagctgatgagctccaaggtcttggtgtggctgtg
tatgaccagcacatacttgaacaaggtgttttgcagcaagtggacgaggcgatccaggag
gccagtcaggctgctgttaaagctgaagccgagaaggagtaccagtctgtgttggatgat
gtcaggtctgttacagcatctttaaaacatatcaacaagattattgagcagctttctcct
tacgcagcctccagtaaagacatcagtaggaagattgagtctgtcaaaagacagaaagaa
aataaggagaaacagttgaagaaagtcagagccaaacagaagcgacttcaagccattctg
ggaggagaggacactcaaagggtggaatttgagtttttggcagaagatgatggagaggaa
gaagcgggaccatccacgttgggcagcatgctcatgccatctcaggagaccgaatgggaa
gagcttatccggaaaggtcacatgactccttttggaacccgaatccaacagaaggaggta
aagaaggagcctcgaaaactgatgcttgcggagaactctgcttttgaccagtacctggca
gaccaggccaagttggctactgagaggaagagagtccctctccttaagaagaagaaaagc
tctggggttggagattcaagagagaaaaccaaaagaacggtttcatcttccaaggataaa
aaactgcgtaagcgtatgcgaaagctccagataactgctttaaaggctcatcctaaggcc
cggcccaaggctgagccacagctccaaaagcaacggagaaaacgtcacactgaaggagag
gagacagacagcgaggggtcagagtacctccccagtgacgaaggaatagatcctgaccaa
gaggagagagaagccatggaggagggctttggatacgatgatgatgaggagtatgagttg
aaaccatacaagagaaaaaccgaagggaaagggaggaaaaaagtaaaaaaaagtgacagt
gaggaagaataccaccctgaaagtacagatgaagaggatgatgacaagggaaaaccgaaa
aaatacaaagatgatggagatgtggagtattataggcagcgaataaggagatggaagcgt
cagcgtcttcgagaaagggaggagaagagagaaaggggtgaggagctaaccgatgacagc
gatgcagaatttgacgaaggcttcaaagttcctggtttcctctggaaaaagctttacaag
taccagcagacgggtgtgcggtggatgtgggaactccactgtcagcaggcagggggcatc
ttgggggatgagatgggattgggtaaaaccatccaggtcatcagctttctggctggactg
agctacagcaaactgagaaccagagggtccaactacaggtatgctggtctgggtccaaca
gtcattgtgtgcccagctacagtcatgcaccagtgggtgaaggagtttcatacctggtgg
cctcttttccgagtggcagtcctacatgaaactgggtccttcactagcaacaaggaaaag
ctcattccagaaatagcagcatgtcatggtatccttatcacttcatattcagctgtgagg
aatatgcaggaaaccctacagctctacgactggcactacattatattggatgagggccat
aagatcaggaatccaaatgctggagttactgttgcttgcaaacagtttcgcactcctcac
aggttcattctgtcaggctcaccaatgcagaacaatttgaaggagctgtggtctctgttt
gactttgtgttccctggcaaactggggacgttgcctgtttttatggagcagttctccgtg
ccaattactatgggtggatatagtaatgcgtctcctgtacaggtccagacagcatttaaa
tgcgcatgtgtgctgagggacaccataaatccttacctgctcagaagaatgaaggcagac
gtcaaggctaacctctccttacctgacaaaaatgaacaggttctgttttgcagattgaca
gaagagcagcgtcaagtgtatcagagcttcttagattccaaagaggtctaccaaatacta
aatggggacatgcaggtgttctcaggtttgatagctctgcgtaagatctgtaaccacccg
gaccttttctcaggcggaccccggatactgagaggaatccctgaggaccagctaactgaa
gaggaacactttggcttttggaagcgctcaggcaagctgattgttgtggagtcgctgcta
cgtctctggttcagacagagccacagagtcctgctcttcactcagtccagacagatgctg
gacatcttggaggtgtttgtaagggagaataactactcgtacctgaaaatggacggcacg
actacaatatcttcccgacagcctctcatcgctcgctacaatgaggacaaatccattttt
atcttcttgttgaccactaaagtcggaggtctgggagtcaatctgactggagccaataga
gtcatcatttatgacccagactggaaccccagtactgacacacaggctcgtgaacgggct
tggaggatcggtcaaaagcagcaagtaacaatctatagactgctgactgctgggaccatt
gaagagaaaatctaccacaggcaaatcttcaaacagttcctaaccaatcgagtactgaag
gatcccaaacagcgacggttcttcaagtcaaatgacatctatgagctgtttactctagct
gatccagatggaggtcagggaacagagacaagtgctatttttgcaggcacaggctctgac
gtcaaagcacccaagaaacccgaaaagccaaagccatcacacaaagaaaatcacagcagc
cacgcacctaaacactcctcagcatcctgcattaatacagttacagacagcacgcacact
cctgcattaagggccggaagcacctctccatgcagtaaaaactctcagggtaaacaaaat
gtcccgatagacagtccaagcaccaaccaggttgctgtagatatagcgcctgcgggacaa
aataataacagtgactgtgatgcagccaaaccagacacaaatacctcaaactcagccagt
tttcaccagcacagaggcaaaaactctgcccggaccagcccacagaaacacagggagaag
aggaaacactgtgactcggacgacttggacaaacgcaaacataagaaacacaagcgctcc
cgggatgctcgattcgaaggccaccgcatctctcatttggtgaagaaaagaacatataag
aaatccgagagcgaagacaacgcagcagaggaccagaagaaatcagacgattatgtcttg
gcaaagctgttcaagaaatctggtattcatagtgtgatgcaacatgacaccatcatagag
tcttccaatcctgactatgttcttgtggaagcagaagccaacagggtggctcaagatgct
cttaaagctcttaaaatttcccggcagcagtgcagactgcgcttcaacagaactcctccc
cctgcaaagaaacgctttggacaaaagaagaattctctcttagctacaccttctgttcag
tctgttcccacttcaaccaaatgcaaggatgctgctattataaagaagtctgtgtcaaag
aaaccaggttcaggagctcatttcagcggggagggcgcagaaagtgactcgaattccacc
ccgctgtcatcctcctctctgctggcccggatgaaggcccgtaatcacctcagcatgccc
tccaggggagaagaaccagaagaggaggaggaggatgcctcgggagctgcagggagtctt
cctgctgctccgcccactgagcacgatgagctgttggtggatctgcgcaactttgtagcc
ttccaggcgagtgtggacggacaggccaccacccaggaagtgctcgagtatttcaaaccg
agactgacccaggaacaggctcctgtcttcagagagctactcaggagcatctgtgacttt
cataggacctctggtcaggagggcatctggagactcaaagagagctttcgctga
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