Oreochromis aureus (blue tilapia): 116319610
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Entry
116319610 CDS
T07295
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X2
KO
K10841
DNA excision repair protein ERCC-6
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116319610 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116319610 (ercc6)
03400 DNA repair and recombination proteins [BR:
oau03400
]
116319610 (ercc6)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116319610 (ercc6)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
116319610 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DegQ
DEAD
Motif
Other DBs
NCBI-GeneID:
116319610
NCBI-ProteinID:
XP_031594852
Ensembl:
ENSOABG00000010128
LinkDB
All DBs
Position
LG13:16346415..16360633
Genome browser
AA seq
1437 aa
AA seq
DB search
MPVDGTEDQVPSSLSSPASAALTPGGTEEDGATGGSAVCTFPENSQAPEAAAAYPANTGP
GEGNSAGKRSGALLQIDRQRIQAASASSGADELQGLGVAVYDQHILEQGVLQQVDEAIQE
ASQAAVKAEAEKEYQSVLDDVRSVTASLKHINKIIEQLSPYAASSKDISRKIESVKRQKE
NKEKQLKKVRAKQKRLQAILGGEDTQRVEFEFLAEDDGEEEAGPSTLGSMLMPSQETEWE
ELIRKGHMTPFGTRIQQKEVKKEPRKLMLAENSAFDQYLADQAKLATERKRVPLLKKKKS
SGVGDSREKTKRTVSSSKDKKLRKRMRKLQITALKAHPKARPKAEPQLQKQRRKRHTEGE
ETDSEGSEYLPSDEGIDPDQEEREAMEEGFGYDDDEEYELKPYKRKTEGKGRKKVKKSDS
EEEYHPESTDEEDDDKGKPKKYKDDGDVEYYRQRIRRWKRQRLREREEKRERGEELTDDS
DAEFDEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVISFLAGL
SYSKLRTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPLFRVAVLHETGSFTSNKEK
LIPEIAACHGILITSYSAVRNMQETLQLYDWHYIILDEGHKIRNPNAGVTVACKQFRTPH
RFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAFK
CACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSKEVYQIL
NGDMQVFSGLIALRKICNHPDLFSGGPRILRGIPEDQLTEEEHFGFWKRSGKLIVVESLL
RLWFRQSHRVLLFTQSRQMLDILEVFVRENNYSYLKMDGTTTISSRQPLIARYNEDKSIF
IFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYRLLTAGTI
EEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLADPDGGQGTETSAIFAGTGSD
VKAPKKPEKPKPSHKENHSSHAPKHSSASCINTVTDSTHTPALRAGSTSPCSKNSQGKQN
VPIDSPSTNQVAVDIAPAGQNNNSDCDAAKPDTNTSNSASFHQHRGKNSARTSPQKHREK
RKHCDSDDLDKRKHKKHKRSRDARFEGHRISHLVKKRTYKKSESEDNAAEDQKKSDDYVL
AKLFKKSGIHSVMQHDTIIESSNPDYVLVEAEANRVAQDALKALKISRQQCRLRFNRTPP
PAKKRFGQKKNSLLATPSVQSVPTSTKCKDAAIIKKSVSKKPGSGAHFSGEGAESDSNST
PLSSSSLLARMKARNHLSMPSRGEEPEEEEEDASGAAGSLPAAPPTEHDELLVDLRNFVA
FQASVDGQATTQEVLEYFKPRLTQEQAPVFRELLRSICDFHRTSGQEGIWRLKESFR
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagacggtacagaggaccaggtgccctcctctctctctagcccggctagtgcg
gccctcaccccgggagggacggaggaggatggagctacaggcggctcagcagtctgtact
ttccctgaaaacagtcaggccccggaggctgctgcagcctatcctgccaacactggacct
ggggagggcaacagcgctgggaaaaggtctggagccttgctgcagattgaccgacagcgc
atccaagcagcttctgccagttcgggagctgatgagctccaaggtcttggtgtggctgtg
tatgaccagcacatacttgaacaaggtgttttgcagcaagtggacgaggcgatccaggag
gccagtcaggctgctgttaaagctgaagccgagaaggagtaccagtctgtgttggatgat
gtcaggtctgttacagcatctttaaaacatatcaacaagattattgagcagctttctcct
tacgcagcctccagtaaagacatcagtaggaagattgagtctgtcaaaagacagaaagaa
aataaggagaaacagttgaagaaagtcagagccaaacagaagcgacttcaagccattctg
ggaggagaggacactcaaagggtggaatttgagtttttggcagaagatgatggagaggaa
gaagcgggaccatccacgttgggcagcatgctcatgccatctcaggagaccgaatgggaa
gagcttatccggaaaggtcacatgactccttttggaacccgaatccaacagaaggaggta
aagaaggagcctcgaaaactgatgcttgcggagaactctgcttttgaccagtacctggca
gaccaggccaagttggctactgagaggaagagagtccctctccttaagaagaagaaaagc
tctggggttggagattcaagagagaaaaccaaaagaacggtttcatcttccaaggataaa
aaactgcgtaagcgtatgcgaaagctccagataactgctttaaaggctcatcctaaggcc
cggcccaaggctgagccacagctccaaaagcaacggagaaaacgtcacactgaaggagag
gagacagacagcgaggggtcagagtacctccccagtgacgaaggaatagatcctgaccaa
gaggagagagaagccatggaggagggctttggatacgatgatgatgaggagtatgagttg
aaaccatacaagagaaaaaccgaagggaaagggaggaaaaaagtaaaaaaaagtgacagt
gaggaagaataccaccctgaaagtacagatgaagaggatgatgacaagggaaaaccgaaa
aaatacaaagatgatggagatgtggagtattataggcagcgaataaggagatggaagcgt
cagcgtcttcgagaaagggaggagaagagagaaaggggtgaggagctaaccgatgacagc
gatgcagaatttgacgaaggcttcaaagttcctggtttcctctggaaaaagctttacaag
taccagcagacgggtgtgcggtggatgtgggaactccactgtcagcaggcagggggcatc
ttgggggatgagatgggattgggtaaaaccatccaggtcatcagctttctggctggactg
agctacagcaaactgagaaccagagggtccaactacaggtatgctggtctgggtccaaca
gtcattgtgtgcccagctacagtcatgcaccagtgggtgaaggagtttcatacctggtgg
cctcttttccgagtggcagtcctacatgaaactgggtccttcactagcaacaaggaaaag
ctcattccagaaatagcagcatgtcatggtatccttatcacttcatattcagctgtgagg
aatatgcaggaaaccctacagctctacgactggcactacattatattggatgagggccat
aagatcaggaatccaaatgctggagttactgttgcttgcaaacagtttcgcactcctcac
aggttcattctgtcaggctcaccaatgcagaacaatttgaaggagctgtggtctctgttt
gactttgtgttccctggcaaactggggacgttgcctgtttttatggagcagttctccgtg
ccaattactatgggtggatatagtaatgcgtctcctgtacaggtccagacagcatttaaa
tgcgcatgtgtgctgagggacaccataaatccttacctgctcagaagaatgaaggcagac
gtcaaggctaacctctccttacctgacaaaaatgaacaggttctgttttgcagattgaca
gaagagcagcgtcaagtgtatcagagcttcttagattccaaagaggtctaccaaatacta
aatggggacatgcaggtgttctcaggtttgatagctctgcgtaagatctgtaaccacccg
gaccttttctcaggcggaccccggatactgagaggaatccctgaggaccagctaactgaa
gaggaacactttggcttttggaagcgctcaggcaagctgattgttgtggagtcgctgcta
cgtctctggttcagacagagccacagagtcctgctcttcactcagtccagacagatgctg
gacatcttggaggtgtttgtaagggagaataactactcgtacctgaaaatggacggcacg
actacaatatcttcccgacagcctctcatcgctcgctacaatgaggacaaatccattttt
atcttcttgttgaccactaaagtcggaggtctgggagtcaatctgactggagccaataga
gtcatcatttatgacccagactggaaccccagtactgacacacaggctcgtgaacgggct
tggaggatcggtcaaaagcagcaagtaacaatctatagactgctgactgctgggaccatt
gaagagaaaatctaccacaggcaaatcttcaaacagttcctaaccaatcgagtactgaag
gatcccaaacagcgacggttcttcaagtcaaatgacatctatgagctgtttactctagct
gatccagatggaggtcagggaacagagacaagtgctatttttgcaggcacaggctctgac
gtcaaagcacccaagaaacccgaaaagccaaagccatcacacaaagaaaatcacagcagc
cacgcacctaaacactcctcagcatcctgcattaatacagttacagacagcacgcacact
cctgcattaagggccggaagcacctctccatgcagtaaaaactctcagggtaaacaaaat
gtcccgatagacagtccaagcaccaaccaggttgctgtagatatagcgcctgcgggacaa
aataataacagtgactgtgatgcagccaaaccagacacaaatacctcaaactcagccagt
tttcaccagcacagaggcaaaaactctgcccggaccagcccacagaaacacagggagaag
aggaaacactgtgactcggacgacttggacaaacgcaaacataagaaacacaagcgctcc
cgggatgctcgattcgaaggccaccgcatctctcatttggtgaagaaaagaacatataag
aaatccgagagcgaagacaacgcagcagaggaccagaagaaatcagacgattatgtcttg
gcaaagctgttcaagaaatctggtattcatagtgtgatgcaacatgacaccatcatagag
tcttccaatcctgactatgttcttgtggaagcagaagccaacagggtggctcaagatgct
cttaaagctcttaaaatttcccggcagcagtgcagactgcgcttcaacagaactcctccc
cctgcaaagaaacgctttggacaaaagaagaattctctcttagctacaccttctgttcag
tctgttcccacttcaaccaaatgcaaggatgctgctattataaagaagtctgtgtcaaag
aaaccaggttcaggagctcatttcagcggggagggcgcagaaagtgactcgaattccacc
ccgctgtcatcctcctctctgctggcccggatgaaggcccgtaatcacctcagcatgccc
tccaggggagaagaaccagaagaggaggaggaggatgcctcgggagctgcagggagtctt
cctgctgctccgcccactgagcacgatgagctgttggtggatctgcgcaactttgtagcc
ttccaggcgagtgtggacggacaggccaccacccaggaagtgctcgagtatttcaaaccg
agactgacccaggaacaggctcctgtcttcagagagctactcaggagcatctgtgacttt
cataggacctctggtcaggagggcatctggagactcaaagagagctttcgctga
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