Oreochromis aureus (blue tilapia): 116319848
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Entry
116319848 CDS
T07295
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
116319848 (rnf40)
Enzymes [BR:
oau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116319848 (rnf40)
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
116319848 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
SpoIIE
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
116319848
NCBI-ProteinID:
XP_031595148
Ensembl:
ENSOABG00000001380
LinkDB
All DBs
Position
LG8:19808315..19822827
Genome browser
AA seq
1001 aa
AA seq
DB search
MSGAGGGKRPPGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEENVRILRKRIEPDPPV
VSTPAPPSATIPDQTPMEEDSVNLASPSGVPPPPVPEAQNEGERPEQQQEERQEEEQQQP
PPPTGSDDLLTPSEPQSDSKTDTSPPPPPLSENAKGFLSTLEQSSEEELTLHLQDRMQFS
KEAIACLVCVFDRLHSHISDMCKVVQAAGFEDDGQSDIINLNCTLLDENTRLRDLATLLQ
GRHHKMSMEYNELVDKVTSSETKVTEMETTVEDLQWDIEKLRNREQKLNKHLAEAMEQLK
SGYSSTGSSGGLAGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQVELQEAVRESE
KLKMDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHLRQIE
HMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLIS
SLQNHNLQLKGDVQRYKRKLRETQLEINKLRCQSGDTGVLILEETTSDSIDVKKEEDDDQ
EEEEERRRELERQRAREREREREREAERERERERERERQRSDELKRKDSDTLKMLRVELK
KAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERKESKK
LADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQLR
EKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLAFKTQVDAQLLVVQKLEEKEGVLQS
TLAALEKELAVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTARER
ESSNLKRAQEDLSRLRRKLEKQKKVEMYSDADEILQEEINQYKAKLRCPCCNTRDKETVL
TKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgctgggggaggaaagcgtcccccaggcggggacagcccccctggcccacct
gaaaagaaaagcaagaaagaagagaagaccaccaccacgctaattgagccaatacgcata
gctggagtctcctctacggaggaaatggacatgaaggttctccagttcaagaataagaag
ctatgtgaacgcttggagcagagacaggcgatggaggatgagctgagagagaaaattgag
aagctggagaagagacaagccactgatgacactaccttgctgattgttaatcgctactgg
tcacagttggaagagaacgtgcgcattctgcgtaaacgtattgagccagatcctccagtc
gtttctacccctgccccaccctcagcaaccatccctgaccaaacaccaatggaggaagat
agtgtcaacctggcttcgccttctggcgtgcctccccctcctgtgccagaggcccagaac
gagggtgagcggccagagcagcaacaggaggagcgtcaggaagaggagcagcagcagccc
cctcctcccactgggtcagacgatttactgacaccatcagagccacaatcggattcaaaa
acagatacatcaccaccacctcctcccctgagtgaaaatgccaagggtttcttgtcgact
ctggagcagagcagtgaggaggaactaactctgcacctccaggaccgcatgcagtttagc
aaagaagccatcgcctgcttggtctgcgtctttgataggctgcacagtcacatcagtgac
atgtgcaaggtggtccaagctgcaggatttgaagatgacggccagtctgacatcattaat
ctgaactgcactctgctggacgagaacactcgactgcgagacttagccactctcctgcag
gggagacaccataagatgtccatggagtataatgagctcgtggacaaggtgaccagctca
gagaccaaggtgactgagatggagacaacggtggaggacctgcagtgggacattgagaaa
ctgcgcaatagggaacaaaagcttaacaaacacctagcagaggccatggagcagctaaag
tcaggatacagcagcactggcagctcaggtgggctggctggaggccagattacactgaat
attcaaaagtttgagagtctcaatgcagagctggagcacaaccaggagctggcaaatagc
cgcatggcagaattggagaaactacaggtggagctccaggaggctgtgagggagagtgag
aagctcaagatggacctgcgtaatattccagaggaggttgtgaaggaaacgttggagtac
aaatgtctgcagtctcagttctccctcctgtacaacgagtctctaggagtgaaaacccag
ctggatgaggcacgggctctcctgctcactgcgaagaacgcccatctccgacagattgag
cacatggagagtgatgagctgtctcttcagaagaagctgcggactgaggtcatccagctg
gaggatactctggcccaggtgcgcaaagaatatgagatgctgcgtattgaatttgagcag
aacctggcagccaacgagcaagcaggaccaatcaacagggagatgcgacacttgatcagc
agcctccagaaccacaacctgcagttgaaaggcgacgtgcagcgctacaagaggaaattg
cgggaaacgcagctggagatcaacaagttacgctgtcagagtggtgacactggagttctg
attttggaggagacgacgagcgacagcattgacgtgaaaaaggaggaggatgacgaccag
gaggaagaagaggagaggaggagggagctggagagacagcgagcccgagagagggagcgg
gagagggagagggaggccgagcgagaacgagagagggagcgggagagagagaggcagcgc
agcgacgagctgaagaggaaagactcagacacactgaagatgctcagagtagaactcaag
aaagcccaagagtcccagaaagagatgaagcttctgctggacatgtataagtcagcgcca
aaggagcaaagagataaagtgcagctgatggcggccgaacgcaaatctaaagctgaggtg
gatgagctgaggatgcgagtacgagagctcgaggagagggagaggaaggagagcaaaaaa
ctggctgatgaagacgccctcaggaaaatacgagtggcagaagagaccattgagcacctg
cagaagaaactcgctgccactaaacaggaggaggaagccctgttgagtgagatggatgta
acaggccaggcctttgaagacatgcaggagcagaacagccggctgttgcagcagttgcgc
gagaaggacgatgccaattttaagctgatgagcgagcgaattaaatctaaccagatctac
aagctgctgaaagaggagaaggaggagctggctgaccaagttcttgcattcaaaacccag
gtggatgcccagctgctggttgtgcagaaattggaagaaaaagagggagtcctacagagc
accctggcagctctggaaaaggaactggctgtcagaacacaagcactagagctgaacaag
aggaaggcagtggaggccgcacagctggcagaggacctgaaggtgcagctggagcacacg
caggccaagctgaaggagatccaagtctctgtggctgagaaccgcactgcccgggagagg
gagagcagcaacctgaagcgagcacaggaggatctgtccaggctcagaaggaagctggag
aaacaaaagaaggtggagatgtactcggatgcagacgagattctgcaggaggagatcaat
cagtacaaggccaagctgcgttgcccctgttgtaacacccgagacaaggagacggtgctc
accaagtgtttccacgttttctgctacgaatgtctgaagatgcgttacgacacccgacag
aggaagtgccccaagtgcaactgtgcattcggagccaacgacttccaccgcatctacatc
acttaa
DBGET
integrated database retrieval system
