Oreochromis aureus (blue tilapia): 116320107
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Entry
116320107 CDS
T07295
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oau03016
]
116320107 (trub1)
Enzymes [BR:
oau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
116320107 (trub1)
Transfer RNA biogenesis [BR:
oau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116320107 (trub1)
Prokaryotic type
116320107 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
116320107
NCBI-ProteinID:
XP_031595484
Ensembl:
ENSOABG00000002635
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All DBs
Position
LG8:complement(30201830..30208253)
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AA seq
278 aa
AA seq
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MAGNVSNTVPAITSSLSQLQALNGLFAIYKKQGPTSADVLNVLKEALLKEAGVKNPNPRK
RKNQSLKMGHGGTLDSAASGVLVVGVGNGTKMLSTMLTGSKKYIAVGEFGKATDTLDATG
SVTLEKGFEHITRLDVEEKLKAFTGDIMQVPPLYSALKKDGQRLSVLLKKGHKVDAKPAR
PVTVYNLTLQEFKPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKELIRTKQGPFTLE
EHALHEEQWTLEHISRSLKTCSEGEQEEDHLKPKKVVT
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaacgtcagtaacaccgtccctgcgataactagttctttgtcacagctacag
gctttaaacggattgtttgcgatatataaaaaacaaggaccgacctccgcagacgtgtta
aatgtactcaaggaagctttgctcaaggaagcgggagtcaaaaatccaaacccgcggaag
aggaagaatcagagcctgaagatgggacacggagggacgctggacagcgctgccagcggg
gtgctggttgttggtgttgggaacggcaccaaaatgctcagcacaatgttgactgggtca
aagaaatatattgccgttggagagtttggaaaagcaacagacactcttgatgccaccggc
agcgtgactctggagaaaggttttgaacacataaccaggttggacgttgaggaaaagctg
aaagctttcactggtgacatcatgcaagtgcctccgctatactcggcattaaaaaaggat
ggccagcgtctgtctgtcctcctgaagaaaggtcacaaggtcgatgccaaaccggccagg
ccagtcacggtgtacaacctgaccctgcaggagttcaagcctcctctcttcactctggat
attgagtgtggaggtggattctatgtcagaagtttggtggatgacctgggaaaagctctg
tcctcttgcgctcatgtgaaggagctgatcagaacaaagcagggtccgttcactctggag
gagcacgccttacacgaggagcagtggacgctggaacacatctcgcgctcgctgaagacc
tgctcagagggagagcaggaggaggaccatctgaagccaaagaaggtagtcacctga
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integrated database retrieval system
