Oreochromis aureus (blue tilapia): 116320174
Help
Entry
116320174 CDS
T07295
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03430
Mismatch repair
oau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116320174 (pms2)
03460 Fanconi anemia pathway
116320174 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oau03400
]
116320174 (pms2)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116320174 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
116320174
NCBI-ProteinID:
XP_031595572
Ensembl:
ENSOABG00000019666
LinkDB
All DBs
Position
LG8:21046796..21052389
Genome browser
AA seq
862 aa
AA seq
DB search
MSDACSEPAGAIRAIDKHSVHQICSGQVVLTLATAVKELVENSIDAGATNIDVKLKESGA
EQVEVADNGKGVEEANFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSVI
TCHESSQVGTKLVFDHKGHLVQKTPHPRQQGTTVSLQQLFSTLPVRHKEFQRNIKKEYAK
MIHVLQSYCIISTGVRITCSNQNGQGKRSTVLSTSGSQSMRDNIGAIFGPKQLQSLLPFQ
QVSPTENVIEEYGLKDADLPKQLFSITGFVSQGDHGVGRSTTDRQFYFINNRPCDPLKVT
KLVNEVYHIYNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKLLLAILKTSLIAMY
EGGVNKISLNYTPAPSTNATSTSEPCRAVLSNKNKAEREEDTEPVILSPKSSLNLAGLKA
AFSSHYSSSSGKSSKEKASGSGTTQKTLQSFFKDPVKTSSCNSSLKSPLKYTRQLDKCSS
AGKSVLDGFRYQAMSCEDTDSQKDSAGSSCNIAEAKPDIQCSDLESSPPKVDSTSVNNET
FKETSGNSHAVPEDPELETEACTPYEDSAVSPEAKRARKDDAHFPSEEESSTFSNAGEKQ
SSTVDAPVSLQRRTVHLQFSLAELGKKMRRLQDQQKQRAGEELLYRRFRAKINPGENQSA
EEELKKEISKEMFKEMEIIGQFNLGFIITKLKSDLFMIDQHATDEKYNFEMLQQHTILQG
QKLIVPQKLHLTAVSENVLIENIEIFRNNGFEFLIDEDAQVMERVKLVSLPTSKNWTFGP
SDIEELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNVNEMKKLVVHMGEIEHP
WNCPHGRPTMRHLANLDVISQD
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcttgctctgaacctgccggggccatcagagctattgataagcactcagtg
catcagatttgctcaggacaggtggtgctgactttggccactgctgtcaaagagttggtg
gagaatagcattgatgcaggagccaccaacattgatgtcaagctgaaggagagtggagct
gaacaagtggaggtggcagacaatggcaaaggtgttgaggaggccaactttgaaggactg
acactgaagcatcacacatcaaagctgagggatttctctgacctcatccacgtggaaaca
tttggcttcagaggtgaagccctgagctctttatgtgctctgagtgacttaagtgtcatt
acctgccacgagtccagccaggtgggcacaaagttggtttttgaccacaaaggccaccta
gtgcagaagacccctcatcctcggcaacagggcaccacagtcagcctgcagcagctcttt
tccaccctgcctgttcgacacaaggagtttcaacgcaatattaagaaggagtatgccaaa
atgatacatgtgctgcagtcctactgtatcatttctacaggagtgcgcattacctgctcc
aaccaaaatgggcaggggaagcgcagcacagtcctcagcactagtggcagccaaagtatg
agagacaacattggagccatatttggaccaaagcagctgcagagtcttctacctttccag
caagtttctcccactgaaaatgttattgaagaatatggactcaaggatgcagatctaccc
aaacagcttttctcgatcacaggttttgtgtctcaaggtgaccacggtgttgggagaagc
accacagacaggcagttctatttcattaacaatcggccttgtgaccccctgaaggtgacc
aaactcgtaaacgaagtgtatcacatatacaacagacatcagtatccatttgttgccttg
aacatagctgtcgcttcagagtgtgtggatgtgaatgtaaccccggacaagcgacagatt
ttccttcaggaggagaaactcctgttggctattctgaagacctctctcatcgccatgtat
gagggtggagtcaataagatcagcctgaactatacacctgcacccagcaccaatgcaaca
tcaacatctgaaccttgccgagctgtcttgtctaacaagaacaaggcagagcgtgaggag
gacacagaacctgttattctgagcccaaagtcatccctgaatctggccggcctaaaagcc
gctttttcaagtcattacagttccagttctgggaagtcgagtaaggaaaaagcttccggt
agtggcacaacacagaaaacactgcagtctttttttaaggatcctgtaaaaacttcttcc
tgcaactcaagtttaaaatctccattaaaatacacaagacagctggataaatgctcgtcg
gcagggaagtcggtgctagatgggtttaggtaccaagcgatgtcctgcgaggacactgat
tctcaaaaagacagtgctgggtccagttgtaacatagctgaagcaaaacctgatattcag
tgttctgacctggagtccagtcctccaaaagtggacagcacgagtgttaataatgaaact
tttaaagagacatcaggcaacagtcacgctgttcccgaagatccagagttagagactgaa
gcatgcactccttatgaggactctgctgtcagcccagaggccaagagagccaggaaagac
gatgcacatttcccttcagaagaagaatccagcactttttcaaatgctggtgagaaacaa
tcctcgacagtggatgctccagtctccctgcagaggaggacagtgcatcttcagttctct
ttagcagagcttggaaagaagatgaggaggttacaggaccagcagaaacaaagggccggg
gaagagctgctgtacagacgcttcagagccaagatcaacccaggagaaaaccagagtgca
gaagaagagctcaagaaggagatcagtaaggaaatgtttaaagaaatggagatcatcggt
cagtttaacctgggcttcatcatcacaaaactcaagtcggaccttttcatgattgaccag
catgccacggatgagaagtacaactttgagatgctacagcagcacaccatactccaaggg
cagaagctcattgtcccacaaaaacttcacctcactgcagtcagtgagaacgtactcata
gagaacatcgagattttcaggaacaacggctttgaattcctgattgatgaggacgctcag
gtgatggagagagtgaagttggtctcactgccgaccagtaaaaactggacattcggtcca
tcagacattgaagaactgatcttcatgctgagcgacagtccaggggttatgtgtcgacca
tccagagtcaggcagatgttcgcctccagagcttgtcgtaaatctgtgatgatcggcact
gctctgaatgttaatgagatgaagaagcttgtggttcacatgggagagatcgagcatccg
tggaactgtcctcacggcaggccaaccatgagacacctcgccaacctggacgtcatctca
caagactga
DBGET
integrated database retrieval system
