Oreochromis aureus (blue tilapia): 116320239
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Entry
116320239 CDS
T07295
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116320239 (rims1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116320239 (rims1b)
Membrane trafficking [BR:
oau04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
116320239 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
116320239 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Zn_ribbon_NUD
Motif
Other DBs
NCBI-GeneID:
116320239
NCBI-ProteinID:
XP_039469659
Ensembl:
ENSOABG00000009509
LinkDB
All DBs
Position
LG6:39364803..39458983
Genome browser
AA seq
1619 aa
AA seq
DB search
MSASVGPQGGPRPPTVPPSMPDLPDLSHLTEEERKIIMAVMARQKEEEEKEQAMLKTLHK
QFESYKQEVRRIGAETRRQQTQQKDDAPTCGICRKTKFADGCGHLCSYCQIKFCARCGGR
VSLRSNNVMWVCNQCRKQQEILTKSGEWFSGSGVRPGSLGTSLNNPATGGEAQRDRKLLR
SRSQAPPSSTNANTGPPDGTHPPAGVTALKGADTMPGSRSQSEPPREKKRPVSFHEQNGK
GGMVRGSARRPADKLHSQSSLDERVGPGDRGERRLGDGRRLEKIHSQDYEDGDENLGRSE
THRRRPEDEEKRERQRREEEFQNRYRSDPNLARYPVKPQKEEQEMRMHAKVSKVRHERRH
SDLAINEVGLGPGEGGGGGGGGGSTGQVPENRLARRGGGGEGDRKALMENHRAYSADRTV
GVVGGAPPASGGGRSGSQPGGPVPSDWGPNNSRLEHGPQDGTRTSREKGGVDNLLRKDSQ
GSDQSESLRPPPPQSYKGKRGVNKRQMSISSSEEEGGSTPEYTSCEDVDMESVSEKGDWD
CHPLDPAVWHHPVSWQPSKEGDHLIGRITLSKRSAMPREAGSLLGLKVVGGKMTETGRLG
AFITKVKKGSLADVVGHLRAGDEVLQWNGKSLPGATKKEVYNIILESKAEPQVEIVVSRP
IGDIPRIPESSHPPLESTGSSSFESQKMDRPSISVMSPTSPSTLRDLPLVLPGQLSVKLW
YDKVGHQLIVNVLQAIDLPPRPDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSAEPKWNQ
TFIYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDIPHWYKLQTHD
VSSIPLPQPSPYLPRRHVHGDSPSKKLQSAERNSRERERGSTLAVPEQQRPVQHRSRSVS
PHREDTCRARSRPAHVPMQRSLDEIHQNRHHSHSPSHYHEPHLEHQRSGDSDYEYSEDSE
VLEMHRSIRGGSAECLHTNSSTLPACLKSKPPHRQEGGSALPRSILTHRVLRFTDEVTVS
DLQPSLDRVRSASTTCLRPDFHSTDRDRCSNSLPRKTPPSPRILVEHVAPEEDRQSNSSP
GPNCPKGSRKSLEGDSRIQPTSILRGSRGRGGPLRPFGQTVLSGSCPNSPRLDRAHPYGS
PTSPAGTPSSGRRGRQLPQLPAKSSSIEQALAVEERARQLQMKVHSYRPSASHDPETNLK
TKREMYAEQRRSSDNMSARSSDSDMSDVSAISRASSASRLSSTSYMSIQSERPGGRLRSK
SLEEDKKDRKISWGVDGEEEENEGGKRQVSEELKHRRHTVAGDTRESSRQMRASMGRSML
KSSSVSGEIYTQERTDGSQSDTALGTVGSGSKKRRSSLSARVVAIVGNRRSRSTSQISGP
EGKSKKEKGASIQRSTETGMAVELTRNMSRQPSRESNNGSMNSCNSEGNLIFSGVNLGAS
SQFSDFLDGLGPAQLVGRQTLATPAIGDIQIGMMEKKGQLEVEVIRARGLVQKPGSKSLP
APYVKVYLLNNGAYVAKKKTKIARKTLDPLYQQALLFEESPQGKVLQVIVWGDYGRMDHK
SFMGVAQILLEELDLSSTVIGWYKLFPPSSLVDPTLASLTRRASQSSLDSSSGPPGVRS
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcggtggggccccagggcggccctcgcccacccaccgtgccgccgtccatg
ccggatctgccggaccttagccacctcaccgaagaggagaggaagataatcatggcagtg
atggctcggcaaaaggaggaagaggagaaagaacaagccatgctaaaaacactgcacaag
cagtttgagagctacaaacaggaagtgcgtcgcatcggggccgagacgcggcgccagcag
acccagcagaaggacgacgcgcccacctgcggcatctgccgcaagactaagtttgcagat
ggctgcggccacctctgctcctactgccagatcaaattctgcgctcgctgtggagggcgg
gtctctctgcgctccaacaatgtaatgtgggtatgcaaccagtgccgtaagcaacaggag
attctcaccaaatcaggagaatggttttcggggtcaggggtgcggcccgggagcctgggc
acctctttaaacaatccagccacgggaggtgaggcccaacgggacaggaagctactccgc
tccaggtcccaagccccaccatccagcaccaacgccaacacagggccaccagacgggaca
catccgcctgccggcgtcactgctctcaagggtgctgacaccatgcctggctctcgctct
caaagtgaacccccaagagaaaagaaaaggccagtttctttccatgagcaaaatggtaag
ggaggcatggtacgtggttctgcccggagaccagcagacaagttgcattcacagtcatct
ctggacgagcgggtgggtcccggagacagaggagagagaaggttaggagatggaaggcgg
ctggaaaagatccactctcaggactacgaagacggggatgaaaacctgggtcgttcagaa
acacaccgcaggcgtccagaggatgaggagaagagggaacggcagcggcgcgaggaggag
ttccagaaccgctatcgcagtgaccccaacttggcaagatacccagtcaaaccacagaag
gaggagcaggagatgcgcatgcacgccaaggtgtcgaaggtgcggcatgagcgacgacac
agtgatcttgcaataaatgaggtcggactggggcctggtgaagggggtgggggaggtggg
ggtggaggcagcacaggacaggtgccagaaaaccgtcttgccaggaggggtggaggtggg
gaaggagaccgcaaggccctcatggagaatcacagggcctactctgcagataggaccgtg
ggggttgtaggtggggctccccctgccagtggagggggaagatcagggtcccaacccggg
ggacctgtgccttcagactggggtccaaacaacagtcgcctggagcatggaccccaagac
gggacgcggacatcgagggagaagggtggggtggataacctgctgaggaaggactctcag
ggctcggaccagtcggagtctttgcggccaccccctccacagtcatacaagggcaagcgc
ggagtcaacaagaggcagatgtccatcagcagctcagaggaggagggcggatccacgccc
gagtacaccagctgtgaggacgtggacatggaaagtgtcagcgagaaaggcgactgggac
tgtcatcctctagatcctgcagtttggcaccatccagtttcgtggcagccatccaaagag
ggtgaccacctgattggacggatcactctgagcaagaggtcagccatgccccgtgaggca
ggctctctcctgggactaaaagtggtaggagggaagatgacggagacagggagacttggg
gccttcatcaccaaagttaaaaaagggagtctggcagatgtcgtgggacacctacgtgca
ggtgatgaggtgttgcagtggaacgggaagtcgttgccaggagcaaccaagaaagaagtg
tacaacatcattctcgaatccaaggctgagcctcaagtggagattgttgtttcgagacct
ataggagacatcccaagaatcccagagtcctcccaccctcctctagaatctacaggctcc
agctcctttgagtcccagaagatggaccgtccatctatatctgtgatgtcccctactagt
cccagtactctcagagaccttcctctggttctgcctggacagctctctgtgaagctgtgg
tacgacaaagtgggccatcagctgattgtcaacgtccttcaagccatagacttgccaccc
cgaccagacggacgacctcgaaacccctacgtcaagatgtacttcctgcctgataggagt
gataagagtaaacgacggactaaaaccgtgaaaaagagcgctgagcccaagtggaaccag
acctttatttattcccacgttcaccggcgagacttcagagagcggatgctggagatcaca
gtgtgggaccagcctcgagtccaggaggaggagagtgaattcctgggcgagatcctcata
gagttggagacggccttgctagacgacattcctcactggtataagctccagacacatgac
gtgtcctctatacctttgccacagccctctccatacctcccacggagacacgtccatgga
gacagccccagcaagaaactacagagcgcagagcgtaactccagggagagagagcggggc
agcacattggctgtgcccgagcagcagcggcccgtccagcaccgctcgcgctcggtgtct
cctcacagagaagacacgtgcagagctcggtctcggcctgcacacgtgcccatgcaaagg
agtttggatgagatccaccagaaccgccaccactcccactccccctcccattaccacgag
ccccacttggagcaccaacgctcaggtgactcggactacgagtactctgaggacagtgag
gtcctggagatgcacaggtctatccggggcgggagtgccgagtgcctgcacacaaacagc
tccaccctccctgcatgcctaaagagcaagccgccccacaggcaggaggggggcagcgcc
ttgcctcgtagcatcctcacacaccgtgtgctcaggttcacagatgaggtcacggttagt
gacctgcagccgtcgttggacagagtgaggagcgccagcaccacgtgtctgagaccagac
tttcactctactgacagagacaggtgttccaactctttgccccgaaagactcccccaagc
cccaggatcttagtagaacatgtggcccctgaggaagacaggcagtctaacagttctcca
ggtccaaactgtccaaagggcagcagaaaaagcctggagggggacagtcgcatccagccc
acctctatcctgaggggcagtagagggagaggaggccctctgaggccctttggccagaca
gtcctgtcagggtcttgtcctaactcaccacggctggacagagcacacccttatggcagc
ccgacttccccagcggggactccctcatcaggtcgcaggggcaggcagctccctcagctc
cccgctaaaagcagcagtatagagcaagccctcgcagtggaggagcgagcccgacagctg
cagatgaaagtacattcctaccggccttcagcctcccacgaccctgagacgaacctcaag
accaaacgggagatgtatgcagaacagaggcgcagcagcgacaacatgtcggccagatct
tcagacagcgatatgagcgacgtgtcggcgatctcccgagccagcagtgcctcccgcctc
agtagcaccagctacatgtctatccaatcagaacggcccgggggacgactcagatccaag
tcattagaggaggacaagaaggacaggaagatctcatggggggtggatggagaggaggag
gagaatgaaggtggaaagaggcaggtctccgaggagctgaagcacaggagacacactgtg
gcaggagacacgagagagtccagtcggcagatgcgagcgtccatgggccgcagcatgctg
aagagctccagcgtgagcggagagatctacacccaggagcgcacagacggcagccaatca
gacacggcgctgggcacggtgggcagcggcagcaagaagagacgctccagcctcagcgcg
cgggtggtggccatcgttggcaaccgtcgcagccgcagcacatcgcagatcagcggcccc
gaggggaagagtaagaaggagaaaggagcatccatccagaggagcacggagaccggcatg
gccgtggagctgacgaggaacatgagccggcagcccagcagagagtccaacaacggcagc
atgaacagctgcaactccgaggggaacttgatcttttctggagtgaatctaggtgccagc
agtcaattcagtgacttcctggatggactcggaccagctcagttagtgggaagacaaaca
ctggctactcctgccatcggtgatatccagattggtatgatggagaaaaagggtcagctg
gaggtggaggtgatcagagcacgaggacttgtacagaagccaggatccaaatctctccct
gctccatatgtcaaagtctatctgctgaataatggagcgtacgtagccaaaaagaaaacc
aagattgcacggaaaacacttgacccactgtaccagcaagcactgctatttgaggagagc
ccgcaggggaaagtgttacaggtgattgtatggggagactatggccgcatggaccataaa
agcttcatgggagttgcacaaatcttattggaggagctggacttatcaagcacagtcatc
ggttggtacaagctgttcccaccatcctctctggtggatccgacacttgcctccctgact
cgacgagcttctcagtcgtctctcgacagctcgtccgggccgcccggggtccgatcttag
DBGET
integrated database retrieval system
