Oreochromis aureus (blue tilapia): 116320342
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Entry
116320342 CDS
T07295
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116320342 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116320342 (rsf1a)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
116320342 (rsf1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
Motif
Other DBs
NCBI-GeneID:
116320342
NCBI-ProteinID:
XP_031595787
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Position
LG14
Genome browser
AA seq
1429 aa
AA seq
DB search
MAAPAVLRSSGPPLCPSFAEVCSFLERYGAALDLPEMTFPQMERYLRDTTTVPKPLVELH
VKLLRKLGRSVSADRWEKYLAKVCQELNSTWAWELEQKGYQEMSMECKSSILKYLCECQF
DENLKFKTAVNDEDPEKMRLQPVGRDRQGLMYWLQLDQEQNIRLYTEEQDDLDGSTWKCI
VRTRNDLAEALELLKAQVDPNHNQERDQNQAGSRSASPAQKEAGDETIRSTNPEASKTSE
DHADSKMVDPQKREKQTRPEVKEELTPPPIKKENADAEVKEEKTLLKPSVFDNRVSTITT
VIKSESRDADTPRNTVSVVMAPVAKQEEEAERAVVRSSQQAKIPLKKRELKLAESFHSNH
LNKTNSSSIIVCNPSVIHAKDGHGREAKLSNSLVSPGGSAASQPHLVVSASRLELTNGRA
SLLPHKDGQNGVVGQVVGHVGVIRSPSERHRAPGAEQQEQNGPNSDLRDSRAAEEQREGS
RQSVLVRKGLIEGETPAGAATSSPPPPPLPPHALTEAPTPTKMDSVGISSLSQNAEEPKR
QTAEDQGKNTTGEQLDKEKKTGQDDEREERSREVSVLSVAEGLKKDDRVKNESTLVQVEA
ELGSSVSPPKLDQQDKKDDQEEGVNGGLAEQKKAKASEERQGLLEEASSELQKEGIRLKI
KIPPHRRNKLKGKAMKEEEKGRELETQEEGRPLRRSARICRSSALPTCRPSSKVAESQKK
KPQKKHALPTRTREEEEEDEYEEDEEEQSSATKKDKKTEPVEQIRKRRGKRRHRRPRWSN
IRTKRRKLNEGGEVEDRGRKRGEEESEGGSDSEEESYKSEEIPSEDACTHCGLPNHPELI
LLCDSCDSGYHTACLRPPLMLIPDGEWFCPPCQHKLLCEKLEEQLQNLDSALKKKERAER
RRERLVYVGISVENIIPEGDEEEEEKSAKKKDSKKSKNLGRRSTRTRKHISYRFDDFDDA
IDEAIEEDFRDLCGGAGRGKDLPTSLSEDGKESQRPIRSQTHAARNRKKRRLNDLESDST
AAESEDEFMLSNSSEDEDFGASGADDDEEEEDEDAGSDAGSWDSRTRPRRVLRGVVKHRP
GRNRGRGRKRLRRRRRRSSDEEEEESEEEMDSDQFSDMTDSNSDKKRRGLRRGQRQQVNY
RETSESSDDSRASANKEKVKRHGRPRKERLSSDYSDVSASSRESEEDDYEDEEEDDQRRR
VNRRRRHEEDFRTRRTRDKRRRRYEEDEGERGRRLKRRLQEEEEAEEERDKRRRLKRTHR
DEEEDLEKMGRGKRREILSQQRRKRLAQMLKKRRPSTDEEEEGEGEEDDDSYSESSSEED
RPVRKRLNRIDSDDDEEDDEDEDDEDGRQKTATKRSSAGERRADSDAQEKGRGRSLSPPN
GHRTSRGPEPRDAAGLGRQGRHNGPSHPEEGEEEEQRDSRDSVQNSLQS
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggcggtgttgaggagctccggcccgccgctctgcccgagcttcgcggag
gtctgctcgttcctggagcggtacggagcggcgctggatctgcccgagatgactttcccg
cagatggagaggtatctacgggacacgactacagttcctaaacccctcgtggagctccat
gtgaagctgctcaggaaactggggaggtctgtgtctgctgaccgctgggaaaaatacctg
gctaaggtctgccaggagttgaatagcacctgggcatgggagctggaacagaagggctac
caggagatgtccatggagtgcaagtccagcatcctgaaatacctctgcgagtgtcagttt
gacgaaaacctgaagttcaagacggcggtcaacgacgaggacccggagaagatgcgtctg
cagcctgtaggtcgggaccggcagggcctgatgtactggcttcagctggaccaggagcag
aacatccggctgtacacggaggagcaggacgatctggacggatccacctggaagtgcatc
gttaggactcgcaacgacctggcagaggctctggagctgctgaaggctcaggttgatcca
aaccacaatcaggaacgggaccagaaccaggctggatccaggagtgccagccctgcacag
aaagaagctggggatgagacgatcagaagcaccaaccctgaggcctcaaagacttcagaa
gaccacgctgacagcaagatggtcgaccctcaaaagagagaaaaacaaaccaggccagag
gtgaaggaggagctcacaccgcctcccatcaagaaggaaaatgctgatgctgaggtgaag
gaggagaagacgctcctcaaaccgtctgtctttgataaccgcgtgagcaccatcaccacc
gtcatcaaatcagaatcgagggacgcggacacccccaggaacacagtgtctgttgtcatg
gcgcccgtggctaaacaggaagaggaagcggagcgagcggtagtcaggagcagccagcag
gccaagataccactgaagaagagggagctcaagctcgcagaaagcttccacagcaatcac
ctgaacaagaccaacagcagcagtattattgtctgtaacccgtcagtgatccacgccaag
gacggtcacggaagggaggccaagctgtctaactcattagtgtcccctggtggttcagct
gcctcgcagccgcatctggtcgtcagcgcatcaaggctggaactcaccaatgggagagct
tcgctcctgccgcacaaagatgggcaaaatggggtagtaggtcaggtggtgggtcacgta
ggagtcatccgcagcccatctgagcgtcacagagcgcccggtgccgagcagcaggaacaa
aacgggccaaattcagacctccgggactcgagagcagcggaggaacaacgtgaagggagc
cgacagtcagtgttggtgaggaagggccttatagaaggggagacgccagcgggagctgca
acttcttctcctccccctcctcctcttcctcctcatgcactaacggaggctccgacaccc
acaaaaatggactctgttggcatctcctcgctgtctcagaacgcagaggaacccaagagg
cagacagcagaagatcagggtaaaaacaccacaggggagcagctggacaaggagaagaaa
actgggcaggatgatgagagggaggagaggagcagggaggtgtctgtgctcagtgtggca
gaaggattaaaaaaagacgaccgagtgaagaatgaaagcactttagtacaagtggaggca
gaattgggaagctctgtttcacctccgaaactggaccaacaggataaaaaggacgaccag
gaggagggcgtcaacggtgggttagcagagcagaaaaaggcaaaggcctcggaggagcgg
cagggactgctggaggaagcctcctctgagctccagaaggaaggaatcaggctaaagatc
aagattcctccccaccggagaaacaagctgaaggggaaggcgatgaaggaggaggagaaa
gggagggagctggagacgcaagaggaagggaggccgctgaggaggtctgcgaggatctgc
agatcatctgctttgccaacctgcaggccaagctcgaaggtggctgagagccagaagaag
aagccacagaaaaaacatgcactacccaccagaacgagggaagaagaggaggaggatgag
tatgaagaggatgaagaggagcagagctcagctacaaagaaagacaaaaaaactgaacct
gtcgagcagataaggaagcgaaggggtaaacgaaggcaccggcgcccccggtggtcaaac
atacgcacaaagaggcgcaaacttaatgagggaggggaggtggaggacagggggaggaaa
cggggagaggaggagagcgaaggagggagcgactcagaggaagaatcgtataaatccgag
gaaattcccagcgaggatgcctgcactcactgcggcctgcccaaccaccccgaactgatc
ctgctgtgtgactcctgtgacagtggataccacactgcctgtctgcggccgcctctcatg
ttgatccctgatggagagtggttctgtcccccctgccaacataaattgctgtgtgagaaa
ctggaggaacaactgcagaatctggacagcgctctgaagaaaaaggagagagcagagaga
aggagggaacggctggtgtacgtaggaatcagcgtggagaacatcatccctgagggagat
gaggaggaagaggagaagtctgcgaagaagaaggattccaaaaagagcaaaaacctcggg
aggcgatcaaccaggaccaggaagcacatcagctacaggtttgatgactttgatgatgcc
attgatgaggccatagaggaggacttcagggacctttgtggaggagcagggcggggcaaa
gacctccccaccagcctatcagaggacgggaaggagagccagcggccaatcagaagccag
actcacgccgcacggaacaggaagaagcggagactgaacgacctggagagcgacagcaca
gcggcggagagcgaagatgagttcatgctcagcaacagctcagaggacgaagatttcggc
gcatctggagcagacgacgatgaagaggaggaagacgaagacgcaggcagtgacgctggc
agctgggatagcagaactcgccccagacgggtgctgagaggagtggttaaacacagaccc
ggcaggaaccgtgggcggggcaggaagcggctgagacggcggcggagacgctcctctgac
gaagaagaggaggaaagcgaggaagagatggactcggatcagttcagcgacatgacggac
agcaacagtgacaaaaaaaggcggggcctgaggcggggccagcgccagcaagtcaactac
cgtgaaacgtcggagtcgtcggacgactcgcgagcctccgccaacaaggagaaggtgaag
cgccacggcaggcctcgcaaggagcgtctctccagcgactacagcgacgtgtcggcttct
tccagagagtcagaggaggacgattatgaagacgaagaggaggatgaccagaggaggagg
gtgaacaggaggaggagacacgaggaagacttccggacaaggaggacgagagacaagagg
aggaggaggtacgaagaggacgagggagagagagggaggcggctgaagaggagactgcag
gaggaagaggaggcagaggaggagagagacaagcggaggaggttaaagaggacacacaga
gatgaagaggaggatctggagaagatggggagggggaagaggagagagatcctgtcgcag
cagcggcgcaaacggctcgcccagatgctgaagaaacggcggccttcgacggacgaggag
gaggagggcgagggcgaggaggacgacgactcgtattctgagtcatcatcggaggaggat
cgtccggtccgcaaaagactgaaccgcattgactcagatgacgatgaagaggacgacgag
gatgaggacgatgaggatgggagacagaagacggcgaccaaaagatcttcagcgggggag
aggagagctgacagcgacgctcaggaaaaggggaggggccgcagcctgtctccgccaaac
ggacatcggacctccagaggcccagagcccagagacgctgcagggttgggcaggcagggc
aggcacaacggtccctcacatccggaggagggagaggaggaggaacagagggactcccga
gactctgtccagaacagtctgcagtcatga
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