Oreochromis aureus (blue tilapia): 116320631
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Entry
116320631 CDS
T07295
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oau03009
]
116320631 (dcaf13)
04121 Ubiquitin system [BR:
oau04121
]
116320631 (dcaf13)
Ribosome biogenesis [BR:
oau03009
]
Eukaryotic type
90S particles
Other 90S particles
116320631 (dcaf13)
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116320631 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
eIF2A
KNTC1_N
MIOS_WD40
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
116320631
NCBI-ProteinID:
XP_031596151
Ensembl:
ENSOABG00000015509
LinkDB
All DBs
Position
LG11:14732765..14744186
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVIARNPDDYVRETKLDIQRVPRNYDPSLHPFEVSREYTRALNATKLERVFAKPFVA
SLDGHRDGVNCMAKHAKSLSTLLSGSCDGEVKVWNLSKHECVRTFQAHEGFVRGMVVRFC
GTSFFTVGDDKTIKQWKMESPGYGEEEEPINTILGKTVYTGLDHHQNDPVFATCGQQVDI
WDEQRSSPIRSFTWGVDSFSSVHFNPVETELLASCASDRSIVLYDMRESTPLKKVIMTMR
SNTLSWNPMEAYYFTCANEDYNLYTYDMRYLAKPIMVHMDHVSAVLDVDYAPTGKEFVSA
SFDKTIRIFAKDGGHSREVYHTKRMQHVICIKWSADNKYILSGSDEMNIRLWKANAAEKL
GVLAPREREAANYSQKLKEKFQHHPQIRRIARHRHLPKTIYHQTKELRIMKEARRRKERN
VRKHSKPGSVPVVSEKEKHVVTVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtcatcgcaaggaacccggatgattatgtccgggagaccaaactggat
atccagcgcgtccccagaaactatgacccctctcttcatccgtttgaggtgagcagggag
tacactcgggctctgaacgccaccaagctggagcgtgtgtttgccaagcctttcgtggcc
tcgctggatggtcacagagatggggtgaactgtatggccaagcacgcgaagagcctctcc
accctgctgtcaggctcctgtgatggggaggtgaaggtgtggaatctgtccaaacacgag
tgcgttcggacgtttcaggcacatgaaggttttgtgcggggaatggttgtgcgtttctgt
gggacctctttctttacggtcggtgatgacaaaacaatcaaacaatggaagatggaatca
ccaggctacggagaagaagaggagccaattaacaccatcctgggaaaaactgtgtacaca
ggtctggaccatcatcagaacgatcctgtatttgcaacgtgcggccagcaggtggacatc
tgggatgagcagaggagcagcccgatccgctctttcacctggggtgtagacagcttcagc
tctgtgcactttaaccctgtggagactgaacttcttgcaagctgtgcctctgacagaagt
atagtgctctatgacatgagggaatctacaccacttaaaaaggtcatcatgacaatgagg
agcaacacgttaagctggaaccccatggaagcctattacttcacatgtgcaaatgaggac
tacaacctctacacatatgacatgaggtacctggccaagcccatcatggtacacatggac
catgtgtctgctgtgctagatgttgactatgctcccacggggaaggagtttgtgtctgcc
agctttgacaagaccatccgaatctttgccaaggacggtggacacagcagggaggtgtat
cacaccaaacgcatgcaacacgtcatctgtataaagtggtctgcagacaacaagtacatc
ctgagcggctcagacgagatgaatatccgactgtggaaagccaacgcagccgagaaacta
ggagtgctggcccccagggagagagaagctgccaactacagtcagaaactaaaagagaag
ttccagcaccacccacaaatcaggcgcatcgctcgccaccgacatctaccgaagaccatc
taccaccagaccaaggagctgaggattatgaaggaggctcgtcgtagaaaggagaggaat
gttcgcaaacacagcaaaccaggaagcgttcccgtggtgtctgagaaggagaagcatgtc
gtcactgtggtgaagtag
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