Oreochromis aureus (blue tilapia): 116320674
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Entry
116320674 CDS
T07295
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116320674 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oau01009
]
116320674 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oau04515
]
116320674 (pcdh11)
Protein phosphatases and associated proteins [BR:
oau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116320674 (pcdh11)
Cell adhesion molecules [BR:
oau04515
]
Cadherins
Protocadherins
116320674 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
116320674
NCBI-ProteinID:
XP_039474848
LinkDB
All DBs
Position
LG2:complement(14224351..14355049)
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AA seq
1265 aa
AA seq
DB search
MDLASQAHVLVVLLTCVVLQCQAQERDYTVKEEQPENVRIGNLRKDLDLNLDPSIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFNEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPIFKDSELEVTVPENAPVGTSVAQLHATDADLGSNAQIHFAFSNQISSSTKRHF
AINSSTGLITVKQPLDREVTPVHKLIVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDADSGHNAEIIYTLSPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTV
IARDNGSTSLQSNVTVKLIVQDLNDNSPTFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAVVTLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSLISSII
ITSRVSPRGLFAIDKTTGNITLQEKIVAADQGLHRLVVKVKDLGQPESLHAIALVHLFVN
DSVSNSTFIQEQLRKSMETPLDRNIGDSEVAPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQENRQIKKKKKRKKRSPKSLLLNFVTIDESKPDDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECSCQGGFKTAGQSTNRQNQSQ
TPEKSFNSPPPICPHKEACQLGKITSVNTQRRVTFHLPDGSQESCSDSGLGDPEPSITAS
TTQPLPLSFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGH
SDSCWMPPALAQFQGPGSNSPISTPTTTAITAALPSFGFQQSCARGIKANMGSMGVMDGR
HTLGRSVPKKDELDKGINRPQFYNTLDRHCSKKEDPVKVIPLASFSSPGQQTGGGGSSFL
HENQL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggacttagcaagtcaggctcatgtgctggtggtcttgctcacctgtgtggtcttacaa
tgccaggcccaggagagggactacacagtgaaggaggagcagccggagaacgtccgaatt
gggaatctgcgcaaggacctggacctgaacctagaccccagcatcaggctatcctcgccg
ttgcagttcaagcctgtgtataaaacgggcgatgtgcctttggtgagggtggaggctaac
acaggggagatctttaccaccaatcacagaattgaccgggagaagctgtgctccggggtc
ttcaatgagaaacgctgctattacgagattgaggtggcagtgcttccggatgagatcttc
agattggtcaagatccgcttcctgattgaggatgtgaatgacaacgcaccccttttccag
tccactgtaataaacatctccatcccagagaacacagccattaacacacgatacccagtg
ccctcagcatttgaccctgatgttgggatcaatgggatccaacattatgaactagtcaag
agtgtcagtgagtttggcttagacatcattgagacgcccgaaggtgacaagtggccgcaa
cttattgttcagcagaacctggatcgtgaacagaaggatacctttgtcatgaagataaag
gtggaggatggtggcaaccctcccaaatccagcacagccattctccaagtcaccatttct
gacgtcaatgacaatcgccccattttcaaggacagtgagctggaagtcacagtaccagaa
aacgcaccagtgggaacatcggtcgctcagcttcatgccacggatgcagacttgggttcc
aatgcgcagatccacttcgccttcagcaaccagatctcttcctcgactaaacgtcacttt
gccatcaacagctctactggacttatcactgtgaagcagccactggacagggaggtaact
cctgttcataaactcattgtcctggccagtgatggcagctccaccccttccagagccaca
gtgactgttaatgtaacagacattaatgacaatgttccctctatagacactcgctacatt
atcaacctggttaatggaactgttctgctgtctgagaatgcacctctgaacaccaaaata
gccctaattactgttactgacaaggatgcagatctttatggcaaagtagcttgctacact
gaccatgatgttccttttcgattgaagcctgtctttaatgatcagtttttactagagaca
gctgctcctctagattatgagacgactcgagaatatgcaattaagatagtggcctcggat
agggggacacctcctttgaacacttcagctatggtcttaattaaaatcaaggatgagaac
gacaatgcgcccatctttccccagccagaaatccagctttccataccggagaacaatgac
ccctctacacagttaataaaaataagtgccactgacgcagacagtggacataatgcagag
attatttatactctcagccctgatgcacctgatgggtttaacattgacagacggtcagga
attctctctgttggcaaacgactggacagagagaagcaggagaggtactcattcactgtc
atagcgagggacaatggctctacatccctgcagagcaatgtcactgtcaagctaattgtc
caggaccttaatgacaacagcccaactttcacacaccctgagtacaacttctatgtgcct
gaaaacctgcctctctatggaactgttggcttaatcacagtaacggatgcagatgcagga
gataatgctgttgtaactttgtccattttgaatgggaaagacaattttatcattgacccc
caaactggcgtgatcaaacccaatattacctttgatcgggaacagcaaagctcctacaca
tttatggtaaaggcagttgatggaggacaacctccaagctcctcctatgccaaggtcact
atcaatgtagtcgatgtgaatgacaatcgccctgtgttcgtcattccgtcctccaattac
tcatatgacctagtgcgaaccaccaccacccctggtgctgtggtcaccagagtgtttgcc
attgacaatgacactggtatgaatgctgagctgcaatacagtcttattagcagcatcatc
attacatctagggtctcccctcgaggtctctttgccatcgacaaaacaacgggtaacata
acactgcaggagaaaatagttgcagctgatcaggggctgcacaggctggtagtcaaagtc
aaagatttaggccagccggagtcattacatgctattgcactcgttcacttgtttgtaaat
gactctgtgtcaaattctacctttatacaagagcaactacgaaaaagtatggagacacca
ttggatcgcaacataggggacagtgaggtagcgcctcaagctaacggatatgtgattgtc
gtcatagctatcatagcagggaccatgactgtcatcttggtgatatttgtgaccgcttta
gtgcgctgccgacagacacccagacataaagtagtgcagaagggcaagcaaagtggagag
tgggtgtcacctaaccaagaaaaccgtcagatcaagaaaaagaagaagagaaagaagcga
tctcctaagagcctcctcctgaactttgtgaccatagatgaatccaagcctgacgacccc
acgcacgagcatgttaatggtacactggatctccctgtggagctagaggagcaaaccatg
gggaagtacaactgggcaaccacgccgaccaccttcaaacctgacagccccgatttagcc
aagcattacaaatctgcatcccctcagcctacatttcaaatcaaacccgaaacaccagtg
gccccaaagaaacaccacgtgatccaggagctccccttggacaacacatttgtggtggga
tgtgactcactctccaaatgctcatcgactagctccgacccatacagtgtctcagagtgc
agctgtcaggggggattcaagactgcggggcaaagcaccaaccgacagaaccagagccag
acaccagagaagtcttttaactcaccgcctcccatttgtcctcataaggaggcctgtcaa
ttggggaagatcacctctgtgaatacccagcgccgtgtgacgttccatcttccagacggt
tcccaggagagttgcagtgacagcgggcttggagacccggagcctagcatcactgccagt
accacccagcctcttccccttagcttcccccaagaggagtactatgagcaaacatcacct
aacagccggaccgagggagatggaaactcagaccctgaatccaccatcgaggtaaacctg
cagaaagccttggctgaggcctctgagacctgcacccaggagtgtctaatactaggccac
tctgacagctgctggatgcccccagccctggcccagttccagggtcctggcagcaacagc
cccatctccacccctaccaccactgccatcactgctgccctcccctcttttggtttccag
cagagctgtgcccggggaataaaagctaacatgggcagcatgggggtcatggatggccgc
catacgttgggcaggtctgtgcccaaaaaagatgaactggacaaagggatcaatcgtcca
cagttctacaacaccctggatagacactgcagtaagaaggaggaccccgtcaaggtcatt
cccctggcaagcttctcctctcccgggcagcagactggtggggggggcagctctttctta
catgagaaccagttgtaa
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integrated database retrieval system
