Oreochromis aureus (blue tilapia): 116320721 Help Entry 116320721         CDS       T07295                                  Symbol col2a1b Name (RefSeq) collagen, type II, alpha 1b   KO K19719   collagen type II alpha Organism oau  Oreochromis aureus (blue tilapia) Pathway oau04510   Focal adhesion oau04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:oau00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116320721 (col2a1b)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     116320721 (col2a1b)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oau00536]     116320721 (col2a1b) Glycosaminoglycan binding proteins [BR:oau00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116320721 (col2a1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC SNARE Motif Other DBs NCBI-GeneID:  116320721 NCBI-ProteinID:  XP_031596267 LinkDB All DBs Position LG5:complement(36268702..36314288) Genome browser AA seq 1491 aa AA seqDB search MFSFMDSRTVLLLVASQVCLLAVVRCQVEDDQEDAFSCVQDGQRYNDKDVWKPEPCRICV CDTGTVLCDEIVCEELKDCPKPEIPFGECCPICAADQPSTSGIPGVKGQKGEPGDITDVI GPRGPPGPTGPPGEQGPRGSRGEKGEKGSPGPRGRDGEPGTPGNPGPPGPPGPNGPPGLG GNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPTGAPGPQGFQGNPGEAGEPGQS GPMGPRGPPGPPGKPGDDGEAGKPGKSGERGPSGPQGARGFPGTPGLPGIKGHRGYPGRD GAKGETGAVGAKGESGSPGESGAPGPMGPRGLPGERGRPGASGAAGARGNDGLPGPAGPP GPVGPSGAPGFPGSPGAKGEAGPTGARGPEGAQGPRGESGTPGSPGPSGASGNPGTDGIP GAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIPGFKGEAGPKGEIGPP GLQGPNGPQGEEGKRGPRGEPGSAGPRGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPS GASGPKGASGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGAR GQPGVMGFPGPKGATGEPGKSGEKGLAGAPGLRGLPGKDGETGSAGPPGPAGPAGERGEQ GQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGPAGATGPRGERGFPGERGAAGSQGLQ GPRGLPGTPGTDGPKGAIGPAGTAGAQGPPGLQGMPGERGGAGIPGPKGDRGDVGEKGPE GAPGKDGARGLTGPIGPPGPSGPNGEKGESGPAGPSGAPGVRGAPGDRGETGPPGPAGFA GPPGADGQPGTKGEQGEPGQKGDAGAPGPQGPSGAPGPAGPTGVSGPKGARGAQGPPGAT GFPGAAGRVGPPGPNGNPGPPGPAGPPGKDGPKGVRGDGGPPGRQGDAGLRGPAGASGEK GDAGEDGPPGPPGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGASGGPGDR GPPGPVGPPGLTGPAGEPGREGTPGSDGPPGRDGSPGNKGERGNTGPAGAPGAPGAPGAN GPVGPTGKQGDRGEPGPQGPAGSSGPAGARGMPGPQGPRGDKGEAGEAGERGQKGHRGFT GLQGLPGPPGQPGDQGATGPAGPAGQRGPPGPVGPAGKDGTNGLPGPIGPPGPRGRSGET GPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGQTEKGPDPLRYMRADQASGNLRQHDAEVD ATLKSLNNQIENIRSPEGSKKNPARTCRDLKLCHPDWKSGEYWIDPNQGCTVDAIKVFCN METGESCVHPKPSSIPRKNWWTSKSTVPKHVWFGESMNGGFHFNYGDDSLAPNTAAIQMT FLRLLSTEASQNITYHCKNSVAYMDGATGNLKKAMLLQGSNDVEIRAEGNSRFTYAVLED GCTRHTGRWGKTVIEYRSQKTSRLPILDIAPMDIGGADQEFGVDVGAVCFL NT seq 4476 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttatggattccaggactgtactgctacttgtagcgagccaagtttgtcta ttagccgttgtgagatgtcaggtggaagacgaccaagaggacgcgtttagctgtgtacaa gatggacagcgttataatgacaaggatgtgtggaaaccagagccttgtcgcatctgtgtg tgtgacactggaaccgtcctgtgtgatgaaattgtctgcgaggagctaaaagactgcccc aaacctgaaatcccatttggagagtgttgccccatctgtgctgctgaccagccttcaacc tctggaatacctggtgttaagggccagaaaggcgaacccggagacattacggatgttata ggaccaagaggaccacctggcccaacgggcccgccaggagagcaaggaccccgaggatca agaggagagaaaggagagaagggaagtcctggcccccgtggcagagatggcgagcctggc acccctggaaaccctggcccccctggacctccaggacctaatggaccccctggccttggt ggaaactttgctgctcagatggctggtggttttgacgagaaggccggcggcgcacaaatg ggtgtaatgcaaggaccaatgggccctatgggacctagaggaccacctgggccaactgga gcacctggtccacaaggtttccaaggtaatcctggagaagctggagagcctggacaatca ggacccatgggaccccgcggcccccctggacctcctggaaaacctggagatgatggtgaa gctggcaaacctggtaaatcaggtgagcgtggaccttcgggacctcagggagctcgtgga ttcccgggaactcctggtctgcctggcatcaaggggcacagaggttatccagggcgtgac ggtgcaaagggagagactggagctgttggtgctaagggtgaatctggttctcctggagag agcggcgctcccggaccaatgggacctcgtggtttgcctggtgagagaggacgtcctgga gccagtggagctgctggagctcgtggaaatgatggtctgcccggtcctgctggtccacct ggccctgttggaccttccggagctccaggcttccctggctcgcccggtgcaaaaggagaa gccggacctactggtgctcgtggacctgagggtgctcagggacctcgtggagagtctggt actcctggatctcctggaccatctggcgcttctggtaaccccggtactgatggcattcct ggagcgaaaggatctgctggtgctcctggcatcgctggtgctcctggtttccctggacct cgtgggcctcccgggcctcagggagccactggacctcttggtccaaagggaacatctgga gacccgggtattccagggttcaagggagaggctggacccaagggagaaattggaccacct ggtcttcagggaccaaatggcccacaaggagaagaaggcaagagaggacccagaggtgag cctggttctgctggaccacggggaccccctggagagagaggagctcccggtaatcgtggt ttccctggtcaagatggtctggctggtccaaagggagcccccggtgagcgtggaccctca ggagccagcggtcccaaaggtgccagcggtgaccccggccgccctggagagcctggtctg cccggtgccagaggtctgactggacgccccggtgatgctgggcctcaaggcaaagttgga ccttctggagcacctggtgaggatggtcgtccaggacctcctggtccacagggagcccga ggacagcctggagtcatgggattccctggaccgaagggagcaactggtgaacctggcaag tctggtgagaaaggactggctggagctcctggtctgagaggtctgcccggcaaagatgga gaaactggctcagctggaccccctggccctgctggtcctgctggagaaagaggagagcaa ggacagcctggtccctctggcttccagggtcttcctggccctcctggtccacctggtgag ggaggaaagcctggagatcagggtgttcctggagaggctggacctgctggtgccactgga cctagaggagaacgtggtttccctggcgagagaggagccgctggctctcagggtctgcag ggacccagaggtctgcctggaactcctggaactgacggacccaagggagcgattggacct gctggcactgcaggagctcagggaccccctggcctgcagggtatgcctggagagagagga ggtgctggtattcccggacccaaaggagacagaggagacgtcggagagaaaggacctgaa ggtgctccaggcaaagatggtgccagaggtctcactggtcccattggtccccctggtcct tctggtcccaatggtgagaagggtgaatctggtcctgctggtccttctggagctcctggt gtccgcggtgctcctggtgacaggggtgagactggacctcctggaccggctggctttgct ggacccccaggtgctgacggtcagcctggaaccaagggagagcagggagaacctggacag aagggagatgctggtgctcctggaccccaaggaccatctggagcccctggacccgctggt cccacaggtgtttctggacctaaaggtgctcgtggtgctcagggacctcctggtgccact ggtttccctggagctgccggccgagttggaccccctggccccaatggtaatcctggacct cctggtcctgctggtcctcccggtaaagatggacccaaaggcgtgaggggagatggtgga cctccaggcagacagggtgatgctgggcttcgtggtcccgctggagcttccggagagaag ggagatgctggagaggatggtccacctggcccacctggtccttcaggtcctcagggattg gctggtcagcgcggtattgttggtctccctggacagcgtggcgagagaggtttcccgggt ctgcctggaccttctggtgagcctggaaaacaaggagcttctggtggtcctggagaccgt ggaccccctggacctgttggaccacctggactgactggacctgctggagagcctggcaga gagggcacccctggatctgatggacctcccggtagagatggttctcctggaaataagggt gagcgtggtaacactggtcctgctggtgctcctggtgctccgggcgctcctggtgctaat ggcccagttggtcccactggcaaacagggagacagaggagagcctggtccacaaggacct gctggatcttcaggacctgctggtgcccgaggaatgcctgggccccaaggaccccgtggt gacaaaggggaggcaggagaggctggtgaaagaggacagaagggacaccgaggcttcact ggtctgcagggtctccccggacctccaggtcaacctggagaccagggtgctactggacct gctggacctgctggacaacgtggaccacctggacccgttggccctgctggaaaagacggt acaaatggtctgcctggacccattggaccccctggaccccgtggtcgcagtggagagacc ggtcctgctggtcctcctggaaaccccggaccccctggtcctcctggtcccccgggccct ggcatcgatatgtctgccttcgctggtctgggtcagactgagaaaggccccgatcctctc aggtacatgagagccgaccaggcttctggaaatctccgacagcatgatgctgaggtcgac gccactctcaaatctctcaacaaccagattgagaacatccgcagccctgagggatccaag aaaaaccctgctcgcacctgcagagacctgaaactgtgccaccctgactggaagagcgga gagtactggattgatcccaatcaaggctgcactgtagatgctattaaggtcttctgcaac atggagacaggggagtcctgcgtccaccccaagccttccagcatccctcgcaagaactgg tggaccagcaagagcacggtccccaaacatgtctggttcggagagagcatgaatggagga ttccactttaactatggcgatgacagcctggcgcccaacaccgccgccattcagatgacg ttcctgagactgctgtccactgaggcttctcaaaacatcacctaccactgtaagaacagc gtggcctacatggacggcgcgacaggaaacctgaagaaggccatgctgctgcagggctcc aatgatgtggagatcagagccgagggcaacagccgtttcacttacgccgtgttggaagat ggctgcacgagacacacaggaagatggggcaagacggtgattgaatacagatcacagaag acctctcgtctgcccatcttagacattgcacccatggatatcggtggagcagaccaggag tttggagtcgatgttggggcggtctgcttcttgtaa

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