Oreochromis aureus (blue tilapia): 116320739
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Entry
116320739 CDS
T07295
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau00260
Glycine, serine and threonine metabolism
oau00630
Glyoxylate and dicarboxylate metabolism
oau00670
One carbon pool by folate
oau01100
Metabolic pathways
oau01200
Carbon metabolism
oau01230
Biosynthesis of amino acids
oau01240
Biosynthesis of cofactors
oau04981
Folate transport and metabolism
Module
oau_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
116320739 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116320739 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
116320739 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
116320739 (shmt2)
Enzymes [BR:
oau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
116320739 (shmt2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
116320739
NCBI-ProteinID:
XP_031596295
Ensembl:
ENSOABG00000007617
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All DBs
Position
LG5:complement(35535304..35561652)
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AA seq
500 aa
AA seq
DB search
MRLFALRQLTRPLCQRVPACLSARAHQSHTATRATDEDRPWTGQESLAQDDPEMWNLLQN
EKERQRCGLELIASENFCSRAAQEVLGSCLTNKYSRNPVIKSHDGGGVVDQIELLCQKRA
LETFDLDPAQWGVNVEPYSGSPANFATYTAVLNPHDRIMGLDISDGGHLSHGYMSDVKRI
SATSIYFETMPYKLNIATGLIDYDQMEMTAKLFRPKLIIAGTSAYARLIDYARIKKLCTN
INAYLLADMAHISGLVAAKAIPSPFEHADLVTSTTHKSLRGARAGVIFYRKGVRSVDKKG
KEIMYDLEDRVNFSVFPSLQGGPHNHAIGGVAVALRQAQSPLFKEYIDQVLKNAKAMAAA
LLSKGYTLVSGGTDTHLVIVDLRPRGVDGTRTERLLELASISTNKNACPGDKSTLTPGGL
RVGAPALTSRQFKEADFVQVVEFMDEGFKIALDVKKKTGKLQDFKNFLLQDPETVARIAD
LRHRVEAFARPFPMPGFPDH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttttcgctctgagacagctcacacggccgctgtgccagcgagtccctgcttgt
ctcagtgcacgcgcccaccagtctcacactgccacccgtgcaacggatgaagatcgtcct
tggacgggtcaggagagcctggctcaggatgaccccgagatgtggaatctgctgcagaat
gagaaggagaggcagcgctgtggtttggagctcattgcatctgagaatttctgcagccga
gcagctcaggaagttctcggctcctgtcttaccaacaaatattcacgcaaccctgtcata
aagtctcatgatggaggaggagtggttgaccaaattgagctgctctgtcagaagcgagct
ctggagacctttgacctggatccagctcagtggggcgtcaacgtcgaaccgtactctggc
tctcctgccaactttgccacttacaccgctgtactcaatccccacgatcgtatcatgggc
ctggacatatctgatggtggacatctgtctcacggctacatgtctgatgtgaaaagaatc
tctgcaacctccatctattttgagacaatgccttacaagctgaatattgcaacaggactt
atagactacgaccagatggagatgacggccaagctgttccggcccaagctcatcatcgct
ggcaccagtgcctatgcccggctcattgactatgcccgcatcaagaagctgtgcaccaac
atcaatgcctacctgcttgctgacatggctcatattagtggcctggtggcagccaaagcc
atcccctcgccctttgaacatgctgacctggtaacctccaccacgcacaagtccctccgt
ggagcaagggctggtgtcatcttctatcggaagggtgttcgctcagttgacaaaaaggga
aaggaaatcatgtacgacctcgaggacagggtcaacttttccgtcttcccctcactgcag
ggtggacctcataaccatgccattggtggtgtagcagtggcgctcagacaggcacagtct
cccctgtttaaggagtatattgaccaggtgctaaagaatgccaaggctatggctgcagct
cttctcagcaaaggctacaccctggtatcaggtgggaccgacacccacctggtcatcgtg
gacctgcggcccaggggtgttgacgggactcggactgagaggttacttgagcttgcgtca
atctccaccaataagaatgcctgccctggagacaagagcaccctgacgcctggtggcctc
agagtaggtgctccagccctgacctcgagacagttcaaagaagccgactttgtgcaagtt
gtggagttcatggatgagggtttcaagattgccttggatgtcaagaaaaagacaggaaag
ctccaagacttcaagaacttccttcttcaggacccagaaacggtggctcgcatcgcagat
ctgcgccaccgtgttgaagcctttgccaggccctttcccatgccagggttccccgaccat
tag
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