Oreochromis aureus (blue tilapia): 116320807
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Entry
116320807 CDS
T07295
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116320807
03041 Spliceosome [BR:
oau03041
]
116320807
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116320807
Spliceosome [BR:
oau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116320807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
116320807
NCBI-ProteinID:
XP_031596385
Ensembl:
ENSOABG00000004150
LinkDB
All DBs
Position
LG17:24746892..24773396
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AA seq
538 aa
AA seq
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MDGSVHHDITVGTKRGSDELFSSVSSNPYIMSTTANGNDSKKFKGDIRGPSVPSRVIHIR
KLPSDITEAEVISLGVPFGDVTNLLMLKAKNQAFLEMNSEEAAQNLVGYYSTMVPIIRHH
PVYVQFSNHKELKTDNSPNQERAQAALRALSSSHVDTAAVAPSTVLRVVVENLIYPVTLD
ALCQIFSKFGTVLRIIIFTKNNQFQALLQYSDGASAQAAKLSLDGQNIYNGCCTLRISFS
KLTSLNVKYNNEKSRDFTRPDLPTGDGQPTMEHTAMATAFTPGIISAAPYAGATHAFPPA
FTLQPAVSSPYPGLAVPALPGALASLSLPGATRLGFPPIPAGHSVLLVSNLNPERVTPHC
LFILFGVYGDVMRVKILFNKKENALVQMSDSTQAQLAMSHLNGQRLHGKPVRITLSKHTS
VQLPREGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDLKML
FASSGAVVKAFKFFQKDHKMALIQVGSVEEAIESLIEFHNHDLGENHHLRVSFSKSSI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacggcagtgtccaccacgatataacagttggcaccaagagaggatctgacgaactt
ttctccagcgtctccagcaacccttatatcatgagcaccacagccaatggcaacgacagc
aaaaagttcaaaggtgacataagaggccccagcgtgccatccagggtcatccacatccgc
aagcttcccagcgacatcacagaggcagaggtgatcagcctcggcgtgccttttggagac
gtcaccaacctgctgatgctcaaagccaagaaccaggcctttttagagatgaactcagag
gaagcagctcagaacctggtgggttattactccaccatggtgccgatcatcaggcaccat
ccagtctatgtacagttttccaaccacaaggagctcaagactgacaactccccaaaccag
gagagggctcaggcagctcttcgggctctgagttcatctcacgtggacacggcggcggtg
gctccgagcacagtactgagggtggtggtggagaacctcatctatccagttaccctggac
gccctgtgccagatcttctcaaagtttggcaccgtgctaaggatcatcatcttcacaaag
aacaatcagttccaggctctgctgcagtattcggacggcgcctcagcccaggcggccaaa
ctgtctctggacggtcagaacatctataatggctgctgtactctgaggatcagcttctcc
aaactcaccagtctcaacgtcaaatacaacaacgagaagagccgagacttcaccagacca
gaccttcccactggagacggccagcccaccatggaacatacagccatggctacagccttt
actccaggcatcatctctgctgctccatacgctggagccacccacgctttcccaccagcc
ttcaccctgcagcctgctgtgtcctccccctatccaggccttgcggtccccgctctgccc
ggagccctggcctctctgtccctccctggggccaccagattgggattccctccaatccct
gctgggcactctgtcttgctggtcagcaatctcaaccctgagagagttacgccccactgc
ctctttattctcttcggtgtctatggagatgtcatgagagtgaagattctgttcaacaag
aaagaaaacgctctggttcagatgtctgacagcacacaggctcagctagccatgagccac
ctgaatggccagcggctgcacgggaagcctgtgcgcatcactctgtccaaacacacgagc
gttcagcttcctcgcgaagggcacgaggaccagggcctgaccaaagactacagcaactcc
cccttgcaccgcttcaagaagcccggctccaagaattattccaacatcttcccgccttct
gccaccttacacctttccaacattcccccttctgtggtggaagatgatctgaagatgctg
tttgccagctcaggagccgtggtcaaagccttcaaattcttccagaaggaccataaaatg
gctctaatccaggtgggctctgtggaggaggccatcgagtccctcatagaattccacaac
catgatttgggagagaaccaccacctgcgagtctccttctccaaatcctcaatctga
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