Oreochromis aureus (blue tilapia): 116321016
Help
Entry
116321016 CDS
T07295
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oau01002
]
116321016
Peptidases and inhibitors [BR:
oau01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
116321016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Med10
Motif
Other DBs
NCBI-GeneID:
116321016
NCBI-ProteinID:
XP_031596621
LinkDB
All DBs
Position
LG23:5299612..5340055
Genome browser
AA seq
1210 aa
AA seq
DB search
MVPSTHWLLLLWGLHGLLAQDYEEGYEEPAVTPKKKNKVYSSNFIPQNGKSLVDEDCSLE
IAFLIDSSESAKDNHAQEKRFALDLMDRLQGLRLQTGRGLSSRAALLQYSSHVIIEQTFK
QWRGTEDFKARTSPIVYIGHGTYTTYAITNLTRIYSEESDTSSVKVAILLFDGISHPRNP
DIFSAVADAKNQGVRFFAIGITPEANELANKAQLQLIANSPASRYLHNLQDRNIVEKVIK
EITAVADEGCPLQNKCACEKGERGPSGPAGKKGRPGEDGSPGPKGQKGESGLGGLPGRIG
AEGKPGYKGEKGERGECGTPGIKGDRGPEGPVGPRGNRGLQGLSGPPGDTGPEGVMGKKG
ERGLPGPPGIQGEQGIGLPGPKGDIGFQGQPGPPGPPGIGEPGPPGPQGPQGVQGERGLI
GEGLPGPKGERGLEGPRGPRGQPGAGIKGDKGDFGPPGLPGLVGLPGLGIQGEKGIEGPR
GPPGSRGPPGEGMPGPKGDQGFPGEIGAPGERGAGDPGAKGEPGSSGMPGLPGLPGEDGA
PGQKGEPGAIGLRGPDGAPGIGIQGEKGDQGQRGIRGLTGPPGIAGPSGPKGEPGAQGRL
GLPGPPGRFITGPKGDPGPNGPPGPVGETGYGLPGPKGDRGDRGPPGPFGPKGDGYPGPM
GPPGLPGLPGEPGPEGVGIPGPKGDIGFRGLPGLPGPPGEGLPGPLGNPGRPGPPGPTGP
QGQGVQGPKGEQGAQGVVGPRGIPGEGFPGAKGDRGLTGERGLKGIKGDVGDPGTPGQHG
RVGAKGEAGLTREDVIRLIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKDFVNA
LVDRVTVGRNATRIGLVLYSLEVRTVFNLARYVTKQDVKNAIRNILYMGEGTYTGTAIRK
ATQEVFHSSRLGVSKVAIVITDGQTDKREPVKLDIAVREAHAANIEMFALGIVNTSDPTQ
AEFLKELNLIASDPDTEHMFLIDDFNTLPALESKLVSQFCEDENGALIYNRITNGYNGYG
NNGYNGNKNLINGKYATGGYGYRPVTQPEVENGRQTGINTGTSTHNHGGTIETTQQGIKG
SNRVHEGGVQRGDTFTHSTSDKHLSPSREHSSSSSSSSSPSITTTSSGVSVQYVPVPRPV
LPKETVPLDPRCGLVLDQGTCRDYSIRWYYDKQANACAQFWYGGCNGNKNRFDTEEECKR
TCVEVRSTGG
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggtcccctccacgcactggctcctgctgctatggggacttcatggtctattggcacaa
gactatgaagaaggctatgaagaaccagcggtaacccccaagaagaagaacaaagtatat
tcttcaaacttcatacctcaaaatggcaaatcgcttgttgatgaggactgcagtttggag
atagcttttcttatcgatagctcagagagcgccaaggacaaccatgcccaggaaaagcgc
tttgccttagacttgatggaccggctgcagggcctgcgactgcagactggacgggggctc
agttcccgtgcagctctccttcagtacagcagtcacgtcatcatagagcagaccttcaaa
caatggcgaggcacagaagactttaaggctcgaacttctccaatcgtgtacattggccac
ggcacctacaccacctatgcaatcactaacttgacccgcatctactcagaagagtcagat
accagcagcgtaaaggtggccattctgctctttgatggcatctcgcacccaaggaaccca
gacatattttcagccgtggctgatgccaagaaccagggtgtccgtttctttgccatagga
atcacgcctgaagccaacgagctggctaataaagcacagctgcagctaattgctaactcc
ccagcttcccgctaccttcacaacctgcaggacagaaacattgtggaaaaagttattaaa
gaaattacagctgtggctgatgaagggtgccccctgcagaacaaatgtgcatgtgagaag
ggtgagaggggacccagcggacctgctggcaagaagggtcgtcctggagaggatggaagc
cctggcccaaaaggacaaaagggtgagagtgggctcggtggacttccaggtcgaattgga
gcagagggaaaaccaggatacaaaggagagaagggagagaggggggagtgtggcacacct
ggaattaagggagacagaggtcctgaaggaccagttggaccaagaggaaatcgtggactt
cagggcttatccggcccacctggtgatactggacctgaaggtgtgatgggcaaaaaaggg
gaaaggggacttcctgggccacctggaatccaaggggaacaagggattggccttccggga
cccaagggtgatattggtttccaggggcaaccagggcctccaggtcctccaggaattggt
gagcctggaccaccgggacctcaaggaccacagggagtccagggagagagagggctgata
ggagaaggtctgcctggaccaaagggagagcgaggcttggaggggccacgggggcccaga
ggacaaccgggtgctggaatcaaaggagacaagggggattttgggccaccgggtcttcca
gggcttgtcggtctcccaggactaggcatacagggtgagaagggcatagagggtccaagg
gggccaccaggaagcagaggtccaccaggagagggcatgcctgggcccaagggagaccaa
gggtttccaggtgaaattggtgctccaggggagagaggggctggagaccctggagctaag
ggtgaaccaggatcatcaggaatgccaggtttgcctgggcttccaggggaggatggagcc
cctggacagaagggcgagcctggagctattggcctaagggggccagatggcgctcctgga
attggtatccaaggtgaaaagggtgaccaaggccaaagaggaatcagaggcttgactggg
ccgccaggcattgctggaccctcaggaccaaagggagaaccaggagcgcaaggcaggttg
ggtttgcctggtcctccgggacgcttcatcactgggcccaagggtgatcctggtccaaat
ggtcctcctggtccagttggggagactggctatggacttcctggtcctaagggtgaccga
ggggatcgaggccctccaggtccatttggtcccaaaggagatggctatcctggccccatg
ggtcctcctgggctgcctggacttccaggagaacctgggcctgagggagtgggcattcct
ggaccgaagggcgatattggatttcgagggttgcctggtttaccaggacctccaggtgaa
ggcctcccaggacctctgggtaaccctgggagacctggtccacctgggccaacaggtcct
caagggcaaggagttcaagggccaaagggtgaacagggggcccagggtgtggtaggacca
agaggaatacctggagaaggctttcctggagctaaaggtgatcgtggtttgacaggggag
agggggctgaaggggatcaaaggagatgtaggagaccctggaacccctgggcaacatggc
cgagtcggtgccaaaggtgaagctggcctcactagagaagacgtcattcgattgatcaaa
gagatctgtggatgtgggatcaagtgtaaggagaggcctatggagttggtgtttgtcatt
gacagctcagagagtgtggggcctgagaactttgaaatcatcaaggactttgtgaatgca
ttagtggaccgggtaacagtgggccgaaacgccaccaggattggcctggtcctgtacagc
ctggaggtgagaactgtattcaacttggcccgctatgtcaccaaacaggatgtcaagaat
gcaatcagaaacatcctatatatgggagagggcacctacactggtacagctatccgcaag
gctacgcaggaggtcttccatagttcacgtttgggagtaagcaaagtggccattgtgatt
actgatgggcaaaccgacaagcgagaaccagtgaagctggatatagctgtgcgagaagca
cacgctgccaatattgagatgttcgccctggggatcgttaacacctcagacccaacgcag
gccgagttcctgaaagagctgaatctaatcgcatctgatccagacacggagcacatgttc
ctcattgatgacttcaacaccctgccagcccttgaatccaagctggtcagccagttctgt
gaagatgagaatggagccctaatatataacagaataactaatggctacaacggctatgga
aacaatggttataatgggaacaaaaatttaatcaatggaaagtatgctactggtggctat
gggtacaggcctgtgacccaaccggaagtagagaatggacgtcagactggtatcaacact
ggcaccagcacacacaaccatggaggaacaatagagaccacgcagcaagggattaaagga
tccaacagagtacatgaaggaggggtgcagcgtggggacacatttacccacagcacctca
gacaaacatctctctccatccagggaacactcttcatcatcatcatcatcttcatcccca
agcataactacaacatcctccggtgtttctgtacagtatgtacctgtaccaaggccagtt
cttcccaaagagactgtccccttggacccccgctgtggcttggttctggaccaaggcacg
tgcagggactacagcatccgctggtactatgacaaacaagcaaacgcatgtgcccagttc
tggtacggaggctgcaatggcaacaaaaaccgatttgacacagaggaggagtgcaagagg
acatgtgtggaagtcagatcaaccggtggctga
DBGET
integrated database retrieval system
