Oreochromis aureus (blue tilapia): 116321124
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Entry
116321124 CDS
T07295
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116321124 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116321124 (prpf8)
Spliceosome [BR:
oau03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
116321124 (prpf8)
Complex C
U5 SnRNP specific factors
116321124 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
116321124
NCBI-ProteinID:
XP_031596755
Ensembl:
ENSOABG00000008646
LinkDB
All DBs
Position
LG14:21175370..21195019
Genome browser
AA seq
2354 aa
AA seq
DB search
MAAAFPYRGVPAAMPPGVPPGVPPAVPPGVPPGVPPPAPVPDYMSEEKLQEKARKWQQLQ
AKRYSEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLK
LLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYISQWGTMWIMMRREKRDRRHF
KRMRFPPFDDEEPPLDYADNILDVEPLEAIQMELDPEEDASVVDWFYEHQPLKDTAKFVN
GTTYRRWQFTLPMMSTLYRLANQLLTDLVDRNYFYLFDLKAFFTSKALNMAIPGGPKFEP
LVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIK
TEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELAEFVEPFLKETPLYTDNTANG
IALLWAPRPFNLRSGRTRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKH
RPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYN
FNLKPVKTLTTKERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYI
FAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFM
RGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGI
KQNKARTILQHLSESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERI
RRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRR
FSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRI
KRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIK
PADTEPPPLLVYKWCQGINNLQDVWETGEGECNVMLESRYEKMYEKIDLTLLNRLLRLIV
DHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEM
AGPPQMPNDFLSFQDTATESAHPIRLYCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPN
NENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKD
NPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFH
NRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKI
GLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEE
DQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINT
LFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGV
EGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPT
INRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQEL
DALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYW
IDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPG
GKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVD
DTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKT
AEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEK
FGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTI
TEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQ
QRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAA
NLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKE
IRCIVMVPQWGTHQTVHLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMA
DNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQM
LLSDRFLGFFMVPGQCSWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQ
EGEIYNADREDMYA
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcctttccttacagaggcgtccctgcagcgatgccacccggtgtgccacca
ggggtaccacctgctgtgccgcctggtgtgccccctggtgtgccccctcctgcacccgtc
ccagactacatgtctgaggagaaattacaagagaaggcaagaaaatggcagcagttacag
gcaaagcgctactcagaaaagagaaagtttggctttgtggatgctcagaaagaagatatg
ccacctgaacatgtccgcaagatcatcagggaccatggagacatgaccaatagaaagttt
cgccatgacaagagggtctaccttggtgccctcaagtacatgccccatgcagtgctgaag
ctgttggaaaacatgccaatgccttgggaacagattcgagatgtgcccgtgctttatcac
atcactggagccatttcctttgtcaatgaaattccttgggtcattgagccagtctacatt
tcacagtggggcaccatgtggatcatgatgcgtcgtgagaaaagagatcgtcggcacttc
aaaagaatgcgctttccaccctttgatgatgaggagccgccactggactacgctgacaac
attcttgatgtggaacccttggaggccattcagatggagcttgatccggaggaagatgct
tcagttgtggactggttctatgaacatcagcccctcaaggacacagccaagtttgtgaat
ggcaccacctatcgtcgctggcagttcacactgcccatgatgtccacactgtaccgtctg
gccaatcagcttctgacagatctggttgatagaaactacttctatctgtttgacctgaag
gctttcttcacatccaaggctttaaacatggccatccctggagggccaaagtttgagccg
ttggtcagagacatcaacctccaggatgaagactggaacgagttcaacgacatcaacaaa
atcatcatccgacagcccatcaggacagagtacaaaatcgccttcccctacctgtacaac
aatttgccgcaccacgtccacctcacctggtaccacacaccaaatgtggtttttatcaaa
acagaagatcccgatcttcccgcattttactttgacccgctgatcaaccccatttcacac
agacattctgttaagagtcaggagcctctgcccgatgatgatgaggagtttgagcttgct
gagtttgtggaacccttcctcaaagaaaccccactctacacagacaacacagccaatggc
attgctctcctgtgggcgccgagacccttcaacctcagatctggccgaacaagacgtgcc
atcgatatccccctgatcaagaactggtaccgcgagcattgccctgctggacagccagtg
aaagtacgtgtgtcataccagaaactgctgaagtactacgtgctcaatgctctcaaacac
agaccacccaaggcccagaagaagagatacctattccgctcctttaaggccacaaagttc
ttccagtccacaaagctggattgggtggaggttggcctgcaggtttgcagacagggctac
aacatgctcaatctgctcatccatcgtaagaacctcaactacctgcatctggactacaac
ttcaacctgaagcctgtcaagacactgaccacaaaggagagaaagaagtcgcgattcggc
aatgcctttcatctgtgcagagaggttctccgtctaagcaagctggtggttgacagccac
gtgcagtacagactgggaaatgttgatgccttccagttggctgacggactgcagtacatc
ttcgctcatgtgggtcagctcacaggcatgtaccggtacaagtacaagctgatgagacaa
atccggatgtgcaaagacctgaagcatctcatctactaccgtttcaataccggtcctgtg
ggcaagggtccaggttgtggcttctgggcccctggttggagagtgtggctgttcttcatg
aggggcatcacccccctgttggagcggtggctcggaaatctgctggccagacagtttgaa
ggacgtcactcgaagggtgttgcaaagactgtgaccaaacagcgtgtggagtctcacttt
gacctggagttgcgtgctgctgtgatgcatgacatcttggacatgatgcctgaggggatc
aaacagaacaaggccagaaccatcctgcagcacctcagcgagtcttggaggtgctggaaa
gctaacatcccatggaaggtacctggattgcctactcctattgagaacatgattctgcga
tacgtgaaggccaaagctgactggtggaccaacacagcccactacaaccgtgagcgaatc
cgtcgcggagccactgtggacaagacggtgtgcaagaaaaacctgggcagactgacccgt
ctgtacctgaaagctgaacaggagagacagcacaactacctgaaggatggtccctacatc
actgcagaagaggccgtggccatttacaccaccactgtgcactggctggagagtcggcgg
ttctccccaatcccgttccctccactctcttacaaacatgacaccaagctgctcatcctg
gcgctggagaggctcaaagaagcatacagtgtgaagtctcgtctgaaccagagtcagagg
gaggagctagggctcatagagcaggcctacgacaaccctcacgaggctctttccaggatc
aagcgtcacctgctaacacagagagccttcaaagaggtgggtatcgagttcatggacttg
tacagccacctggtgccagtgtatgatgtggagcccctggagaagataactgatgcttac
ttggaccagtacctgtggtatgaagcagacaagagacgcctgttcccaccctggatcaaa
cctgctgatacagaaccaccaccgctgctggtctacaagtggtgccaaggcatcaacaac
ttgcaggacgtgtgggagactggagaaggagaatgcaacgtgatgctcgagtcccgctat
gagaagatgtacgagaagattgatctgacattgctcaacaggctgctgcgtcttatcgtt
gaccacaacattgctgattacatgacagccaagaacaacgtggtcatcaactacaaggac
atgaaccacaccaactcttacggcatcatcaggggtctccagtttgcctcgttcatcgtg
cagtactacggtctggtgatggacctcctggttctcggcctgcaccgtgccagtgagatg
gctggtccccctcagatgcccaacgacttcctcagttttcaagacaccgccacggagagc
gctcacccaatccgactgtactgccgctacatcgaccgcatccacatcttcttcagattc
actgctgatgaggccagggacctgattcagaggtatctgacagagcacccagaccccaac
aatgagaacattgtgggttacaacaataagaagtgctggcctcgtgatgcccggatgagg
ctgatgaagcatgatgtgaatcttggacgcgcagtgttctgggacatcaagaatcgcctg
cccaggtctgtgaccacagtccagtgggagaacagctttgtgtccgtgtacagcaaagac
aaccccaacctgctcttcaacatgtgtgggtttgagtgccgcatccttcctaaatgtcgc
accagctatgaggagttcactcacaaggatggtgtctggaacctgcagaatgaggtgacc
aaagagaggaccgcacagtgtttcctgcgggtggatgatgagtcaatgcagcgttttcac
aacagagtgcgtcagatcctgatggcctctggatccaccacattcaccaagattgtgaat
aagtggaacacggctctgattggtctgatgacctacttccgtgaggctgtggtaaataca
caggagctactggacctgctggtgaagtgcgagaacaagattcagacgcgtattaagatc
ggtcttaactccaaaatgcctagccgcttccctcccgtggtcttctacactcccaaagag
ttgggcggtctcggcatgttgtccatgggccacgtgcttatcccacaatcagacctgagg
tggtccaagcagacagatgtgggcatcacccacttcaggtctggaatgagccacgaagaa
gaccagctgatccctaacttgtatcgttacattcagccgtgggagagcgagtttatcgac
tctcagagggtctgggctgagtatgctctcaagagacaggaggccattgcccagaacagg
cgtctaactctggaggatttagaggactcctgggacagaggaatccccaggatcaacact
cttttccagaaggacagacacacactggcttatgacaaaggctggagagtcagaactgac
tttaaacagtaccaggtgttgaagcagaatccgttctggtggacccaccagagacacgat
ggtaaactgtggaacctgaacaactaccgcacagacatgatccaggcgctcggtggtgtg
gagggcattctggagcacacactcttcaaaggcacttatttccccacctgggagggtctc
ttctgggaaaaggccagtggctttgaggagtccatgaaatggaagaagctgactaatgcc
cagagatctggtctcaaccaaatccccaaccgtcgtttcactctttggtggtcacccacc
atcaacagagccaatgtgtatgtaggtttccaagtgcagcttgacctgacaggaatcttc
atgcacggcaaaatccccacgctgaagatctccctcattcagatcttcagggctcacttg
tggcagaagatccatgagagcattgtcatggatctctgtcaggtgtttgaccaggagttg
gatgctctggaaattgaaactgtgcagaaggagaccatccaccccaggaagtcctacaag
atgaactcatcttgtgctgacatacttctctttgcatcctacaagtggaacgtctcccgg
ccttctctgcttgctgactcaaaggacgtgatggacagcaccaccacacagaagtactgg
attgacattcagctccgatggggtgactatgactcccatgacatcgagcgctatgccagg
gccaagttcctcgactacaccacagacaacatgagtatctacccctctcccactggggtg
ctcattgctattgatctggcctacaacctccacagtgcgtatggtaactggttccctgga
ggcaagcctttgatccagcaggccatggctaagatcatgaaggccaaccctgccctgtat
gtgctcagggaacgcatccgcaaaggtctgcagctgtactcctctgagcccactgagccg
tacctgtcctcacagaactacggtgaactgttctctaaccagatcatctggtttgtggat
gacacgaatgtctacagagtcactatccacaagacctttgagggtaacttgaccacgaag
cccatcaatggagccattttcatcttcaacccgaggaccggtcagctcttcctcaaaatc
attcacacctctgtgtgggctgggcagaaacgtctgggacagctggccaagtggaaaaca
gctgaggaagtggctgctctgattcgttccctcccagtggaggagcagccaaaacagatc
attgtgaccaggaagggcatgctcgaccctctggaggtccacttgctcgacttccccaac
attgtgatcaaaggctcggagttgcagctgcccttccaggcctgtctgaaggtggagaag
tttggagacctgatcctgaaggctacagaaccacagatggtgctgttcaacctttatgat
gactggctgaagaccatctcgtcctacacagccttctctcgactcatcctgatcctcaga
gcgctccatgtcaacaatgaccgtgccaaggtgatccttaaacctgacaaaacaactatc
accgagccccatcacatttggcccacgctcactgatgaggagtggatcaaggtggaagtg
caactcaaagatctaattttggccgattatggcaaaaagaacaatgtgaacgtagcttcg
ctgacccagtctgagatccgtgacatcatcctgggaatggagatctcagctccatctcaa
cagcgccagcaaattgctgagatcgagaagcagaccaaagaacagtcgcagctcaccgcc
acacagacccgcacggtcaacaagcacggagacgagatcatcacctccaccacctccaac
tacgagacccagacattctcatccaagactgaatggagagtcagggccatatctgctgcg
aaccttcatctccgaaccaaccacatctacgtctcatctgacgacatcaaggagacgggt
tacacctacatcctgcccaaaaatgtcctcaagaaattcatttgcatctcagatctgcga
gcacagattgcaggctacctgtatggcaccagcccacctgacaacccccaggtgaaggag
atccgttgtattgtcatggtgccccagtgggggactcaccagactgtccacctgcccaac
cagctgcctggtcatgaatacctgaaagaaatggaaccccttggctggatccacacacag
cccaatgaatcgccgcagctgtccccacaggatgtcactacccatgccaagatcatggct
gataacccttcatgggacggagaaaagaccatcatcattacttgcagcttcaccccaggt
tcatgcacgctcacagcctacaagctgacacccagtgggtacgaatggggtcgccagaac
acggacaagggcaacaaccccaaaggttacctgccgtctcactatgaaagagtgcagatg
ctgctgtctgatcgtttcttgggcttcttcatggtacctggccagtgctcctggaactac
aacttcatgggtgtgcggcacgatcccaacatgaagtatgacctccagctggccaacccg
aaggagttctaccacgaagtccaccggccctcgcacttcttaaactttgcctctctgcag
gagggcgagatctacaatgccgaccgcgaggacatgtacgcctga
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integrated database retrieval system
