Oreochromis aureus (blue tilapia): 116321220
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Entry
116321220 CDS
T07295
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116321220 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116321220 (vps8)
Membrane trafficking [BR:
oau04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116321220 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
Clathrin
WD40_CDC20-Fz
TPR_VPS8_2
zf-RING_Vps41
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-RING_11
Beta-prop_THOC3
Beta-prop_WDR5
ANAPC4_WD40
Beta-prop_EML_2
DUF5659
zf-C3H2C3
zf-RING_5
Beta-prop_WDR3_1st
WDR55
zf-RING_2
EIF3I
Motif
Other DBs
NCBI-GeneID:
116321220
NCBI-ProteinID:
XP_031596866
Ensembl:
ENSOABG00000010151
LinkDB
All DBs
Position
LG13
Genome browser
AA seq
1402 aa
AA seq
DB search
MSHSPDSHSLLSASSQLNLMEVDSIDDKEFDIPQVDTPPTLESILNELEDEEEPFVLEDT
CILNTDNMDAHSCETSSLASSDSGDPTHLKRRKRTVDMSSTVHGCVLRHSLLKGISAQIV
SAADKVDAGLPTAITVSGVIAVGTSHGLALVFDANQALRLCLGTKTTGAEFGAVSALSIN
HDCSRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDDPTIAVCNDSGGSV
FELAFRRVMGMRSCDSRCLFSGSKGEVCCIEPLRSPLDFRDHPITHYSLLAMASLTKILV
IGLKPSLKVWMTFPYNKSDPSSVPQLAWQFVAVQKMVNPVLAFCKGDTVHFLLVKKEESG
TIHVIKQRQFQLSCDIISLSWINSRTLVLVDSHEKLHVVDRPSQEVLETLDLEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSVSSYSGQIVYLGTKSAHIMTLRNWRERIDCLM
KQEHFVEALSLAWSFHEGAAKAVVGLYGDSLKRKAVVSDKMIEILFQFAEHALKKCPEQG
KIQVMEQHFQDVVPVLVDYCLLLQRADLLFNQLYSRLVENMVAKAVFLESLESYIVADRV
GHLTPAIMRDLLDHYHSNGMMDSLERCIVHLDVTSLDIQQVVQVCWENQLYDAMIYVFNS
GTNDYITPMEKLFAVIGPTLKEGRSLTDENVVMGNKLLVYISCCLAGRAYPLGDIPEDLV
VQVKNQVFDFLIRLHSADSSEEEEVFPFIRTLLHFDTREFLNVLAMTFEDFKNDKQALEY
QQRIVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCCPDD
DSRHTERQQVLLELLQVGGVVQFNEERLLMLAEKAKFYQICEFLYEKNHQYDMIIDCYLN
DPLRKWEIFNYIHNLLSMPGYSNEEKQRVKSKVLKHIRDVVTLDPSKSADLVLFHFTTEV
QQIISELQDDQLLFNFLNCLLESREGPHSGSILPQEGDLHELLLDLMCRFAPDQLLSFLH
TSQHYRLEEAIQITQKHHCNEATAYLLETKGDVRGAFAVLLETLKETLCALTAESDRGAK
DGRCDEDEAVRAESMLMKLKESVNDIIVFCHRSCQGLDQKQREVLWFPLLDTMMASQKQV
KGLNAKHTSDVLKELTMKVLNAMSSFISLPAIIQQILQDPVYGKGKLAEIQGLILGMLDT
FNYEQTLLETTTNLLNYDLHWSLAHLRAAVTRGLHPRQDCCNICLQQYKRRQDAAEEIIV
FSCGHLYHLQCLQQKDCVWGCASELQRQWRCYKCSAIHGGRVGPSTEPKRGRSTSLAQTH
VTSARQDTGASALRKKVFAEATLDLQQEQSWDEIRCLYRGPSRLSILSEVSHCHEKTGSL
FSVQPGTESFQLKLSPPPLFEE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattccccggactcccacagcctactctctgcctcttcccagcttaacctgatg
gaagtggactcgattgatgataaggagtttgacattccacaagtggatacacctcccaca
ctggaaagcattctcaatgagctggaggatgaggaggaaccgtttgtactggaggacacc
tgcatcctaaacacagacaacatggatgctcactcctgcgagacctcctctctggccagc
tctgacagtggagacccaacacatcttaaacgaaggaagaggacagtggacatgagttca
acagttcatggatgtgtccttcgacacagcctgctgaagggcatctctgcacagatcgtc
tctgctgctgacaaagtggacgctggacttccaacagctataacagtgtcgggtgtcatt
gctgtgggaacatctcatggtctggctttggtctttgatgccaaccaggccttgcggctt
tgtctgggtaccaagacgactggagcagagtttggcgccgtctctgccctgagcatcaac
catgactgctcacgacttctctgcgggtttgccaaaggacagattacaatgtgggatcta
gccaatgggaagcttctgagaaccatcactgatgcccaccctcctgggacagccattctg
catgtgaagttcacagacgacccaactattgccgtgtgcaatgacagtggaggatctgtt
tttgaactggctttcaggagggtgatggggatgaggtcatgtgactctcgatgtctcttc
agtggttctaaaggggaggtgtgctgtatcgaacctttgcgttctcctctggacttcaga
gaccatcccatcacgcactactctctgcttgctatggcatctctcactaagattctagtc
atcggattaaagccctccctgaaagtctggatgacatttccttacaataagtcggatcca
tccagtgttcctcagctggcctggcagtttgttgctgtccagaagatggtcaatccagtc
ctggctttttgcaaaggagatactgtccacttcctcttggtaaagaaagaggaatcgggg
acgatccatgtcatcaaacagagacaattccaactcagctgtgacatcatcagcctaagt
tggattaacagtcgtacgctggtcctggtggacagccatgaaaagctgcacgtggtggac
cggcctagccaagaggttttggagactctggacttggagcaggtgcaactggtctataac
agccgacatttcaaatcactggcaactggaggaaacgtctcccaggctctggctttagtt
ggagaaaaggcttgttaccagtcagtctccagctactcaggacagattgtgtatttgggc
accaagtcagctcacattatgactctgcggaactggagagagcgtattgactgtttgatg
aagcaggaacactttgttgaagccctctctttggcctggtcctttcacgagggagctgct
aaggctgtggttggcctgtatggagattctctgaagaggaaggcagtggtcagtgacaag
atgatcgagatccttttccagtttgctgagcatgctttgaaaaagtgtccagaacagggc
aaaatccaagtgatggagcaacatttccaggatgtagttccagtcctggtggattactgc
ctgctgctgcagagggctgacctcctctttaaccagctgtattcgcggctggtagagaat
atggttgctaaggctgtgttcttggagtcactggagtcgtacattgtagctgatcgtgtt
ggacacctcactccagccattatgagggacctcctcgaccactaccatagtaatggcatg
atggacagtctggagagatgcatcgtccacctagatgttaccagcttggacatacagcag
gtggttcaagtatgttgggagaaccagctctatgatgcaatgatctacgttttcaacagt
ggaacgaatgactacatcactccaatggagaaactctttgcagtgatcggtccaacactt
aaggaaggaaggagcctaacagatgagaacgtggtaatgggaaacaaactactcgtgtac
ataagctgttgtcttgcaggaagagcatatccacttggagatattccagaagaccttgtg
gttcaagtcaagaaccaggtttttgacttcctaatccgtctccactcagctgactcgtcc
gaggaagaggaagtttttccatttattcgtacactcctccactttgacaccagggaattt
ctcaacgttctcgccatgacatttgaagactttaaaaatgacaagcaggcccttgagtac
cagcagaggatagtggacatcttacttcaggtaatggtggacaacccagactttactccc
tcccaagtgggcggactcttcacctttttagctcgtcagttggccaaaccagacaacaca
ctgtttgtgaacaggaagctctttgatcaggtgctggagttcctttgttgtccggacgat
gactcccgacacactgaaaggcagcaggttctgctggagcttctgcaggtcgggggtgta
gtccagtttaatgaagaaagactcctgatgctggcagagaaagccaagttctaccaaatc
tgtgaatttctttatgagaagaatcatcagtatgacatgatcattgactgctacctgaat
gaccccctcagaaagtgggaaatctttaactacatccacaacctgctgtccatgcctgga
tacagcaacgaggaaaaacaaagagtcaagagcaaagtgctgaaacacataagggacgtg
gtgacccttgaccccagcaaatcagctgacttagtgctgtttcatttcaccaccgaggtg
cagcaaatcatctctgagcttcaggatgatcagctgcttttcaatttcctcaactgcctc
ttggagtcgagggaaggccctcattcagggtccatcttacctcaagaaggtgacctccat
gagcttctgctggatttaatgtgccgctttgccccagaccagcttctgagctttctccac
acctcccagcactacagactagaagaagcaatacaaataactcagaagcaccactgcaat
gaagctacagcctacctgctggagaccaaaggagatgttcgtggagcatttgctgtctta
ttagagacactgaaggaaacactgtgtgctcttactgctgagagtgacagaggagcaaag
gacgggagatgtgacgaggacgaggctgtaagagccgaatcgatgctgatgaaattaaag
gaatctgtgaatgacatcattgtcttctgtcatcgaagttgtcagggccttgaccagaaa
cagagagaggttctctggtttccacttctggacacaatgatggcatctcagaaacaagta
aaggggctcaatgctaaacacacctctgacgtgctgaaggagctcacaatgaaggttctc
aacgctatgagcagctttatttctttgcctgccatcattcaacagatcctgcaggatcca
gtgtatggcaaaggcaagctggcggagattcaaggcctcattctgggtatgctggacacg
tttaactatgaacagactttacttgaaacaaccaccaatctgttgaactacgacctccac
tggtccctggctcacctgcgtgctgctgtcacaagaggactccacccacgacaagactgc
tgtaacatctgcctccagcagtacaagaggaggcaggatgcagctgaggagatcattgtt
ttcagctgtggtcacctataccacctgcagtgcctgcagcaaaaggattgtgtgtggggc
tgtgcttcagagctgcaacggcagtggaggtgctacaaatgttcggccatccacggagga
agagtcgggccttccactgaaccaaagagaggccgtagcacatctctggcacagactcat
gtgacatcagcacgccaagacacaggagcgtcggctctgaggaagaaggtgttcgctgag
gcaacactggaccttcagcaggaacagtcctgggatgaaatccgctgcttataccgagga
ccatccaggttgtccatcctttcagaagtctcccactgccacgagaaaacaggatctctg
ttctctgtccaaccaggaacagagagtttccaactgaaactctcccctccgcctctcttt
gaagaataa
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integrated database retrieval system
