Oreochromis aureus (blue tilapia): 116321392
Help
Entry
116321392 CDS
T07295
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116321392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116321392
03036 Chromosome and associated proteins [BR:
oau03036
]
116321392
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116321392
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116321392
Chromatin remodeling factors
BAF complex
116321392
PBAF complex
116321392
GBAF(ncBAF) complex
116321392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
116321392
NCBI-ProteinID:
XP_039469841
Ensembl:
ENSOABG00000020448
LinkDB
All DBs
Position
LG6:24982316..24999329
Genome browser
AA seq
1668 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSSHSMMGPSPGPPSSGHSQPGPS
GYGPDSMHPLHKPMEGLHEKSLSEESRLSQMKGLSVRQGGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPIPSNGPPSGPLMPSSSSSSSSGGPGSASTPLDGSSGDQHILGPNNRPVPP
GSSGPGPSPGPSLGPSVPSLGPGLDTSGPAGPGGPGGPTPFNQNQLHQLRAQIMAYKMLA
RGQPLPDHLQMAVQGKRPMPGMQQPMPSLAPGAGGGPGGGPTGPGPGPMGSGYSRGHGMM
GPNMPPPGPSGTPVGMQGQNTNGPPKSWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAPP
SVPPAASPVMPPQTQSPGQPAQPTPMMPYHAKQNRITPIQKPCGLDPVEILQEREYRLQA
RITHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALDA
KAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGK
IQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQ
TDEYVANLTELVRAHKAAQALKEKKKKKKKKKKVENAEGQTPALGPDGEPLDETSQMSDL
PVKVIHVDSGNILTGVDAPKAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEEPQP
SAAPVEEKMKITDPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFARGLQSYYSVAHAVTE
KVEKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK
RLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTY
EYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPE
LWALLNFLLPTIFKCCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRL
KKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIM
QLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATNHKVL
LFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPESEYFIFLLSTRAGG
LGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKY
KLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLHMNEEDEVPDDETV
NQMIARSEEEFELFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEE
EEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEMEEEVRHKKTTRKRKRDRDLDLP
GPSSSIGGRGRGDKDDDGKRQRKRGRPPVEKLSPNPPTLTKKMKKIVDAVIKYKDSASGR
QLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLGDLERDVMLLFQNAQTF
NLEGSLIYEDSIVLQSVFTSLRQKIEKEEESEGEESEEEEEEQEEGSESESRSVKVKIRL
SRKDKGGDRGKGRSRRTGRTRAKPVVSDDDSEDEQEEERSPSATDEEA
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacctgatccccccatgggaggcacccctcgccctggtccctcccctggtccg
ggtccttctcctggggctatgcttggccccagccccggaccctccccaggctcctctcac
agtatgatgggccccagccctggtcctccctcctctggacactcccagccagggccctct
ggatatggccccgacagcatgcaccctctgcacaaacccatggagggtttgcacgagaaa
agcttgagtgaggagagccgtttaagtcagatgaagggactgtcagtgagacagggcggg
cacagtggtatgggccccccacccagtcctctagaccaacactcacaaggctaccactct
ccattaggtggctctgaccactcaagtcccatcccttcaaatggtcccccctctgggccc
cttatgccctcatcatcttcctcctcttcctctggtggtcctggctctgcctctacacca
ttagatggctccagtggagatcagcacattttgggtcctaataaccgacccgtccctcca
ggcagttctggaccaggtccaagccctggacccagtcttggccccagtgtccctagcctt
ggtcctggccttgataccagcggccctgcaggacctggaggtcctggtggtccaactccc
tttaaccagaaccagcttcaccaacttagagcccagatcatggcttataagatgctagcc
cggggacagcccctcccagaccaccttcaaatggctgtccaaggaaagagaccgatgcca
gggatgcagcagcccatgcctagtctggctcccggagctggaggagggccaggaggtggt
ccaacaggaccagggccagggccaatgggctcaggctacagccgaggtcacggaatgatg
ggtccaaatatgcctccccccggcccatcaggaaccccagttgggatgcagggtcaaaat
actaatggacctcccaagtcatggcccgaaggccccatggtgaacgcagcagccccctcc
aacgctccacaaaaactcatcccccctcagcccactggccggccatctcccgctccccct
tcagttccgccggctgcctccccagtgatgcccccgcagacccagtctcccggccagcct
gcacagcctactcccatgatgccttaccatgccaagcagaaccgcattacacccattcag
aaaccctgtggcctcgaccccgtggagatactgcaggagagggagtacaggttacaagct
cgtataacccatcgcattgctgagctagagaatctgccgggttctctggctggtgattta
cgaaccaaagctaccatagagctcaaagccctccgactacttaacttccagagacagctg
cgtcaagaggtggtggtgtgtatgcgccgtgacacagctctagaaaccgcccttgatgcc
aaggcctacaagcgaagcaagcgacagtctctccgcgaagcccgcatcacagagaaactg
gagaaacagcagaagattgaacaagaacgcaaacgtagacaaaaacatcaggagtacctc
aacagcatcctccagcacgccaaagacttcaaggagtaccaccgttcgatcacaggcaaa
atccagaaactgaccaaagctgtggccacctaccacgccaacaccgagcgggagcagaag
aaggagaatgagcgtattgagaaagagaggatgaggaggctcatggctgaggatgaggag
ggctaccgtaaactcatcgaccagaagaaggataagcgcttagcctacctgctgcagcag
accgacgagtatgttgcaaacctcacagagctggtccgagcccacaaagctgcacaggcc
ctcaaggagaagaaaaagaagaaaaagaaaaagaagaaggtggagaatgccgagggtcag
actcctgctttgggtcctgatggagagcctctggatgagacgagtcagatgagtgacctg
ccggtgaaggtcatccacgtggacagtgggaatatcctgacaggggtggacgctcccaaa
gctggacagttagaaacatggctggagatgaaccctggatatgaggtggctccccgctca
gacagtgaagacagcgaggaggaagaagaggaggaggaggaagaagaggagcctcagcct
tcggcagctccagtagaggaaaagatgaagattacggacccagacagtgaagatgtgtca
gaggtggacgtccgacacatcattgaaaatgccaaacaggacgtggacgatgagtatagc
ggtgcagcgtttgctcgaggactccagtcgtattactctgtggctcacgctgtcacagag
aaggtggagaaacagtccagcttgttgataaatgggcagcttaaacagtatcagattaaa
ggtttggagtggctggtttctctttacaacaacaacctgaacgggatcctggctgatgag
atgggtctgggaaaaaccatccagactatcgccctcatcacatacctcatggagcacaaa
cggctcaacggaccctacctcatcattgtacctctttcaactctttctaactgggtgtat
gagtttgacaaatgggcgccatcagtcgtgaaagtgtcttacaaggggtctcctgctgct
agaagagcgtttgtcccccagctgcgtagtggcaagtttaatgttttgctcaccacttat
gagtacatcatcaaggacaaacaagtactggccaagatccgttggaagtacatgattgta
gacgaaggccaccgcatgaaaaaccaccactgtaaactgacccaggtcctgaacacccat
taccttgctccgcggcgagtcttgctgacggggacgccgctgcagaacaaacttcctgag
ctgtgggcgctgctcaatttcctcttacccactatcttcaagtgctgcagcaccttcgaa
cagtggtttaacgcccctttcgctatgactggagagaaggtggaccttaatgaagaggag
acaattctgattattcgtcgtctccataaagtgctacgccccttcctgttacggaggttg
aagaaggaggtggaggcacagcttccagaaaaggtggagtacgtgatcaagtgtgacatg
tcttctcttcagagagtcctctacaggcacatgcaggccaagggggtcctgctcactgat
ggatcggagaaagacaagaagggtaaaggcggcacgaagacactgatgaacaccatcatg
cagctgaggaagatctgcaatcacccttatatgtttcagcaaatagaggaatccttctct
gaacatttaggattctctggtgggatagttcagggtcctgacctgtatcgggcatcagga
aagtttgaggtgctggatcgaattctgccaaagctgagagccacaaaccacaaagtgctg
cttttctgtcagatgacctcactcatgaccatcatggaggactactttgcctaccgtaac
ttcaaatacctgcgtctggatggcacaacaaaggctgaggatagaggaatgttactgaag
acattcaatgacccagagtcagagtactttatttttctcctgagcacaagggctggaggc
ctcggcctcaatctgcagtctgccgacactgtagttatttttgactccgactggaaccca
catcaggacttgcaggcgcaggacagagctcaccgcattggtcagcaaaacgaggtacgc
gtgctacgtctttgtacagtcaacagcgtcgaggagaaaatcctggcagcggccaaatac
aaactaaatgtggaccagaaagttatccaggccggcatgttcgaccagaagtcttccagc
cacgagcgcagggcctttttgcaggccatcctggaacatgaggagcaagacgaggtctgg
ggtcaagaagtgtgcctacacatgaatgaggaggatgaggtgccagatgatgagacggtc
aaccagatgattgctaggagtgaagaggagttcgagctgttcatgcgtatggacctggac
cgacgccgcgaggaggctcgtaacccacgacgaaaaccacggctgatggaggaggacgag
ctgcccacgtggatcatgaaggatgatgctgaggttgagcgacttacctgtgaggaagag
gaggagaaaatgtttggccgaggttcccgacaacggaaggaagtggactacagcgattcg
ctgactgagaagcagtggctcaaggcgatagaggaaggcacactggaggagatggaggaa
gaggtacggcacaaaaagacgacccgcaagaggaagcgagatcgtgacctggatctccct
ggtccctcctcttccattgggggacgtggacggggggataaagatgatgacgggaagagg
cagaggaagaggggacggccacctgtcgaaaaactctcgccgaatcctcccaccctcaca
aagaagatgaagaaaattgtggacgctgtcatcaaatacaaagacagcgccagtgggcgt
cagctgagcgaggtgttcatccagctgccgtctcgaaaagagctgcccgagtactacgaa
ctcatccgcaagccggtagacttcaggaagatcaaggagaggattcgaagtcatcgctac
cgcagtctgggtgacctggagagagacgtcatgctgctcttccagaatgctcagaccttc
aacctggaggggtcgctgatatacgaggactccatcgtgctacagtcggtgttcaccagc
ttgaggcagaagatcgagaaagaggaggaaagtgagggagaggagagtgaagaagaggag
gaagagcaggaggaaggatcagagtctgaatcccgctcagtgaaggtgaaaatccgtctg
agcaggaaggataaaggtggagatcgagggaagggacgcagcagacggacgggacgcacc
agagcaaagccggtcgtcagtgatgatgactctgaggatgagcaggaagaggagcgctcc
ccaagtgccaccgacgaggaggcctga
DBGET
integrated database retrieval system
