KEGG   Oreochromis aureus (blue tilapia): 116321464
Entry
116321464         CDS       T07295                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    116321464 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oau03021]
    116321464 (taf5l)
   03036 Chromosome and associated proteins [BR:oau03036]
    116321464 (taf5l)
Transcription machinery [BR:oau03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     116321464 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     116321464 (taf5l)
Chromosome and associated proteins [BR:oau03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     116321464 (taf5l)
    STAGA complex
     116321464 (taf5l)
    TFTC complex
     116321464 (taf5l)
    SAGA complex
     116321464 (taf5l)
    SLIK complex
     116321464 (taf5l)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I TFIID_NTD2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st RMC1_N Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR75_2nd PEP5_VPS11_N Beta-prop_IP5PC_F WD40_like PROPPIN Lysis_col WD_LRWD1 Nbas_N Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 116321464
NCBI-ProteinID: XP_031597180
Ensembl: ENSOABG00000024441
LinkDB
Position
LG6:complement(5684253..5690521)
AA seq 600 aa
MKRIRTEQIQYAVAQYLKRRQYVDTDGSLKGAKLYQSSEEMAASLTVQTESGCSNVVSAA
PCQYDPQHYEIQYSKLRTFLSEADISWAKEVSSVLYPLFVYLHLDMVRFGLKGAVDGFYS
RFHGAFLQDSEQCTIIEQLRHVLSAQDIVTNPKLNAFLEHKYVVHLTEPAYSYLLRYLQS
EDNSALCRILSTHLQLEVSASRRTDYQLYGAACGSTAAPNSTSSWAGVDGTESGDGVEVP
AGIPQNEAALEALQDCVKKVREGPPSLTTVCFYAFHHTEQMLNTAEVSADSRLLAGGFDT
STVKLWSLRARKLKARPHQADVSHIHLACDVLEEEVDEEDSSGSEIKTLRGHSGPVFRTA
FLTDSSGLLSCSEDTTIRYWDLGSFTNTVLYQGHVYPVWDVDVSPCSLYFASCSHDRTAR
LWTFSRTYPLRLYAGHLSDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
MDNSVRVWDIRNSHGGTSADSSSSELVGMYTGNTSNVLNVQFMACNLLLVTGTAQEKAEQ
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgaagcggattcgcactgagcagatccagtatgccgtggctcagtacctgaagaggagg
cagtatgtggacactgacggctccctgaaaggagccaagctctaccagtcctccgaagaa
atggctgcaagtctcacggtgcagacggagtcaggatgttccaatgtcgtttctgctgca
ccatgccagtatgacccacagcattatgagattcagtattccaagctccgcaccttcctg
tcagaagcagacatatcctgggcaaaagaggtgagcagtgtcctctatccgctcttcgtc
tacctccacctggacatggtgcgctttggactgaagggggctgtggatggtttttacagt
cgttttcatggcgcctttcttcaggacagtgagcagtgtaccatcatagagcagctccgc
catgtcctcagtgcacaagacattgtgaccaaccccaagctgaatgctttcttagagcac
aaatatgtggttcacctgacggagccagcctacagctacctgctgcgttacctgcagagt
gaggacaacagcgccctctgtaggatcctcagtacacacctgcagctggaggtcagtgcc
tcgaggcggacagactaccagctctatggagctgcttgcgggtcgacagctgctccaaac
tccacctcctcctgggccggagtggatggaacagagagtggtgatggggtggaggtccca
gcagggatcccacagaatgaggcagccctcgaggctctgcaggactgcgtcaagaaagtc
cgtgagggaccaccgtcactcaccactgtctgtttttacgccttccaccacacggagcag
atgctgaacactgctgaggtctcggctgacagtcggttgctggccggtggatttgacacc
tccacggtaaagctgtggagcctccgtgccagaaagcttaaggccagaccccatcaggct
gatgtgtcacacatccacctggcatgtgacgtactggaggaggaagtagatgaagaggac
agctcaggcagtgagataaagacgctgcgaggtcacagcggcccagtttttcgtaccgcc
ttcctcacagacagctccggcttgctctcgtgctctgaggacacaaccatccgctactgg
gacctgggcagcttcaccaacacggtgctctaccaggggcatgtctacccagtatgggat
gtggacgtcagcccctgcagcctttactttgccagttgctctcacgatcgcaccgcccgt
ctctggacgttctcccggacatacccattgaggctctatgcagggcatctttctgatgtt
gactgtgtgaaattccacccgaactccaactatttagccaccggttccacagacaagact
gtgcggctctggagcacccagcagggggcgtctgttcgcctttttacgggccaccgtggc
cctgtgctgtcacttgctttctcaccgaatggcaagtacttggcgtccgctggtgaggac
cagcgggtgaagctgtgggatttggcatctgggactttgttcaaagacctaagaggacac
acagatagtgtcaccagcctgtccttcagtccggacagcagcctagtggcatcttcatct
atggacaactcagtgcgggtgtgggacatccgcaactcacacggtgggacgtcagctgac
agctcgtccagcgaattggtgggaatgtacactggaaacaccagcaacgtgctcaatgtc
cagtttatggcctgcaacttgctgctggtgacgggaaccgcacaagagaaagcggagcag
tag

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