Oreochromis aureus (blue tilapia): 116321793
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Entry
116321793 CDS
T07295
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116321793 (irx1b)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116321793 (irx1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
116321793
NCBI-ProteinID:
XP_031597605
Ensembl:
ENSOABG00000006667
LinkDB
All DBs
Position
LG22:complement(10835141..10839083)
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AA seq
462 aa
AA seq
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MSFPQLGYPQFLSASHEVYGGDRPGSAREGTTEGGVSSSATAAAVGSMLGMYGSPWAAHN
YSAFLPYSGATDLALISQMGSQYELKDSPGSHPASLPVHTAQGFYPYGQYPYGDPSRAKT
ATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVTW
GRSAEDRDGRIFSSDNEDEHEHGKNGSDDEDEEEEIDLETVDIERPEEQREGERGSARGE
AEAGLSAAEQASESKSSESSRTLSAEALRGAEAGVSLGKSPSVKLPAEHSPGRQECQRPA
QSKPKIWSLAETATAPDSSNKSSPAAHAHHAALASTGHPALLPGHGIYTCQIGKLHNWAN
AAFLNANSLLNMRSLLAGAPAGHLPVHGAVPAARRDARPAAVGTGTSGTEDDSDVESSGS
FSPKRDDEESDHRPDSLKSPFQMITDRPHHGTAAQRVLTTTI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctggggtatccccagttcctcagtgcctcccatgaggtgtacgga
ggcgatcggccgggctctgcccgggaaggaaccaccgagggcggcgtgagctcatcagcg
accgccgcggctgtcggctccatgctggggatgtacggaagcccatgggcagctcataac
tacagtgcctttctgccgtacagcggagccacagacctcgccctcatttcccagatgggc
tcacagtatgagctgaaggacagcccggggtcccacccagcttctctacctgttcacacc
gcccaaggcttctacccctacggccagtacccgtacggggacccgtcaagggccaaaacg
gccacaagggagaccaccagcaccctgaaggcctggctgcaggaacaccagaagaaccct
taccccaccaaaggagagaagatcatgcttgctatcattacgagaatgacactcacacag
gtgtcgacgtggttcgcgaacgcccgcagacgcctgaagaaggagaacaaggtcacctgg
ggccgcagcgccgaggaccgggacggccgcatcttcagcagcgacaacgaggacgagcac
gagcacggcaagaacggcagcgacgacgaagatgaagaggaggagatagatttggaaacc
gtcgatatcgagagacccgaggagcagcgcgaaggggagcgtggctcggcgaggggggag
gccgaggcgggcctgtccgccgccgagcaggcctcagagtcgaagagctcggagagcagc
aggacgctttctgcggaggccctgagaggagccgaggcgggtgtttctctcggtaaatcg
cccagtgtcaagcttcccgcggaacattcgcccggcaggcaggagtgccagagaccagca
cagagcaaacctaaaatctggtctctggctgagaccgccacggcgcccgacagctctaac
aaatcttcccccgcggcccatgcgcaccacgcggctttggcctccaccggacaccctgcc
ttactcccgggtcacggaatatacacgtgccagattggcaagctgcacaactgggccaac
gcagcttttctgaatgccaactctcttttgaacatgaggtcgctcctggcaggggcgccg
gccggacacctgcccgtccacggcgcagtgccggctgcgcgtcgtgacgcacgaccggca
gcggtcggcacgggaacgtcgggtacagaagacgacagcgatgtagagtcatcagggagc
ttcagtccaaaaagagatgatgaagagagcgaccacaggcccgattccctgaagtccccc
tttcagatgatcactgacagacctcaccacgggacagcagcacagcgagttctgacaaca
acaatatga
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