Oreochromis aureus (blue tilapia): 116321807
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Entry
116321807 CDS
T07295
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oau03009
]
116321807 (ddx21)
03036 Chromosome and associated proteins [BR:
oau03036
]
116321807 (ddx21)
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116321807 (ddx21)
Ribosome biogenesis [BR:
oau03009
]
Eukaryotic type
Pre-60S particles
Helicases
116321807 (ddx21)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116321807 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
116321807
NCBI-ProteinID:
XP_031597621
Ensembl:
ENSOABG00000007282
LinkDB
All DBs
Position
LG1:complement(26535989..26545126)
Genome browser
AA seq
757 aa
AA seq
DB search
MPSKIIFETDDQAMDEEVDTVAETKTLKNKTKEGKKLKKQQQQQQLEEQEDPDCEPPAPK
KKKKKDKLAADQVNEDLDEATDMNGNSNGVETPKKKTKKSTGEQTDTEKIKKKQKKATAE
AATNGHSTPNTPVQTPSQSSEDSASDSEKETEETPEQKEGAFSNFRISKVTIDKLKARGV
SYLFDIQVKTFNHVYDGEDVIAQARTGTGKTFSFAIPLVEKLQKDSVEMARGRPPKVLVL
TPTRELAIQVAKDFKDIAKRVSIACFYGGSSYNPQIDAIRNGIDILVGTPGRIKDHIQNN
KLNLTKVKHVVLDEVDQMLDMGFAEQVEEILGSSYKKDSDTNPQTLLFSATCPPWVYEVA
KKYMRPNCKHIDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVIQVYSGSHGRTIVFCE
TKKEANELSMNASIKQSTQSLHGDIPQKQREMTLKGFRNGAFEVLVATNVAARGLDIPEV
DLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVP
TANDIIKSSSKDAVRFLDSVPVAAIGYFRASAEKLIEERGAVDALAAALAHISGATSLEQ
RSLLNSDAGFSTMQLVCSQEMHNLGYAWRTIKEQLGEQIENHIHRMTFLKGRTGVCFDVP
ADKVKEIQETWQDGRRWQLTVATELPELEEKQFSNRGDRGFGSGNRGDRGGFRGGRGRSF
GGSGGRGNGFRNGGGSSGGYGNNRGGHKRTFNQAFDY
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaaaatcatttttgaaactgatgatcaagcaatggacgaagaagtagacact
gtcgcggagactaaaaccctaaagaacaagaccaaagagggcaagaagctgaagaagcag
cagcaacagcagcagctggaggagcaggaggatccagactgtgagcctcctgcaccaaaa
aagaaaaagaaaaaagacaagctggcggcggaccaagtgaacgaagacctcgatgaggcc
actgatatgaatggcaacagcaatggtgttgaaacgccaaagaagaagactaagaagagc
accggagaacagacagacacagagaaaatcaagaagaagcaaaagaaggcaactgcagag
gcagcaaccaatggacattccaccccaaacaccccggttcagacaccatcccagtcaagt
gaagactcggccagtgacagcgaaaaagaaacagaagagacaccagagcagaaagaaggg
gcattctccaactttaggatctctaaagtcactattgacaaactgaaagctcgaggagtc
tcttatctgtttgacattcaggtaaagacatttaatcatgtctatgatggagaggacgta
attgcccaagcccgaacgggaacaggaaagactttctcctttgctatccctttggtggag
aagctccagaaggattcggtggagatggccagaggccgtcctcccaaggttctggtgttg
actccaaccagagagttggctatccaggttgctaaagacttcaaagacatcgctaagcgc
gtatctatcgcctgtttctatggaggcagctcctacaacccacagattgatgctatccgt
aatggtattgatatattagttggaacccccggccgcatcaaggaccacatccagaacaat
aaactcaacctcaccaaagtcaaacatgttgttctggatgaagtggaccaaatgttggac
atgggctttgcagaacaggttgaagagattttgggttcatcatataagaaagactccgac
accaacccacagactctcttgttttcggctacctgcccaccttgggtgtatgaagtggca
aagaaatacatgagacccaactgcaaacatattgacctgattggcaagaaaactcagaaa
gctgcgacaactgtggaacatctagccatagcatgtcactggtcacagcgtgcggcggtg
ataggcgacgtgattcaggtgtacagtggcagccatgggagaaccatcgtcttctgtgag
acaaagaaagaggccaatgagctttccatgaatgcatccatcaaacagagcacccagtct
cttcatggtgatatcccccagaagcaaagagagatgacgttgaaaggatttaggaacgga
gcctttgaggttctggttgccactaatgttgcagcccgtggattagatatccctgaagtt
gacttggtggtccagtgttctccacccaaggatgtggagtcatacatccatcgttcagga
cgtacagggcgtgcaggcaggactggagtctgcatctgcttctaccaaagaaaagaggag
gaccagttgcgctacgtagaaaacaaagcaggcatcacattcaggcgagttggcgttccc
accgccaacgatattattaagtcatcaagcaaggatgctgtcaggtttctggattctgtt
ccagtcgcggctatcgggtacttcagagcatcagctgagaagctgattgaggagagagga
gcagttgatgcactggctgctgccctggcccacatttctggagccacaagtctagagcag
aggtcactgctcaactctgatgctggtttcagcacaatgcagttggtgtgttcccaggag
atgcataatctgggttacgcctggagaaccatcaaagagcagctaggagagcagattgag
aaccacattcacagaatgaccttcctcaaaggcagaacaggagtttgttttgacgtccca
gctgataaagtcaaggagattcaggaaacatggcaggacggtcgccgttggcagctcacc
gtggccacagagctgccagagctggaggagaagcagttcagtaaccgtggtgacagaggc
tttggcagtggtaaccgtggtgacagaggagggttcagaggcggcaggggaaggagtttc
ggtggaagcggtggccgtggcaacgggttccggaacggcggtggcagcagcggcggctac
ggcaacaacagaggaggacacaaacgcacattcaaccaagcgtttgattactaa
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