Oreochromis aureus (blue tilapia): 116321851
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Entry
116321851 CDS
T07295
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116321851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116321851
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116321851
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116321851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
116321851
NCBI-ProteinID:
XP_031597654
Ensembl:
ENSOABG00000012756
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Position
LG17:complement(22062419..22078324)
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AA seq
540 aa
AA seq
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MFGANRKKFMEGGIESDYPDDSSLYYSQQSMFPPHRADKDMLASSSASSTGQLSQLGASL
YGPQSALGFPMRGMNSSAAPPLSRSGLNQSAGQLSSTPNAGSMHTPPSPSRGILPMSSRS
VLNHNQQVGGPTGQSGGMGGGERGGGGGRSGSMGSPSRSSPSIIGMPKQQQARQPFTINS
MSGFGVNRNPGFMNNSLSNNIFNGTDGSENVTGLDLSDFPALADRSRRDGGSNPTPLHNP
LTGRAPYVGMVTKPSSEQSQDFSIHNEDFPALPGPNYQTKDPTSTNEDSKTNLNSSGKPA
SNSDGPKFPGDKSSAPSNNNQQKKGIQVLPDGRVTNIPVGMVTDQFGMIGLLTFIRAAET
DPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRD
KVPPSQDTPKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWIT
RAPGMEPTLKTNAYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaaccggaagaagtttatggagggagggatagagagtgactacccggac
gactccagtctctactacagccagcagtccatgttccctcctcaccgtgcggacaaagac
atgttggcgtcttcctctgcctcctctacgggtcagctgtcacagctcggagccagcctg
tatggcccgcagagtgcattggggtttcccatgcgaggcatgaacagcagtgcagctcct
ccattgagtcgcagcgggttgaaccagtctgctggtcagctctccagtacgcccaatgct
ggctcgatgcacacgcccccctcacccagcaggggaatactgcccatgagcagccggagc
gtgctcaatcacaaccagcaggtgggaggtccgacggggcagtcaggtgggatgggaggc
ggagagcgtggaggtggaggagggaggagcggcagtatggggagtcccagccggtcgtca
cccagcatcatcgggatgcccaaacagcaacaagcgcggcagccgtttaccatcaacagt
atgtcagggtttggggtgaacaggaatccaggcttcatgaacaactcgctatccaacaac
atcttcaatggcacagacggcagtgagaatgtgacggggttggacctgtcggatttcccg
gcattagctgacaggagtcggagggatggaggttcgaatcccaccccactgcacaacccg
ctgaccggtcgagctccctacgttggcatggtaaccaagccgtccagtgagcagtcgcag
gacttctccattcacaacgaagatttcccagctctcccagggccaaactaccaaacaaaa
gaccccaccagcaccaacgaagacagcaaaacgaatctgaactcatcgggaaagccagcc
tctaactcagatggtccaaagttccccggcgataagagctccgcaccgagcaacaacaac
cagcagaagaaagggattcaggtgcttcctgacgggcgagtgaccaatatccctgttggc
atggtaacagaccagtttggaatgattggccttctgacgttcatccgggcggcggagacc
gaccccggcatggtccacctggcactgggctcagacctcaccacacttggcctcaacctc
aactcgcctgagaatctctatcctaagtttgcgtctccgtgggcatcggctccatgtcga
ccgcaggatatagacttccacgtcccctcagagtatttaaccaacatccacataagggac
aaggtacctccttcacaagacaccccaaagttggcagctatcaagttgtctcggtatggt
gaagatctgctgttttatctctactatatgaacggaggagacctcctacaactgctggct
gctgtagaactgtttaacagggactggaggtatcataaagaggagcgggtttggatcact
cgagctccggggatggagcccacgctgaagaccaacgcctatgagagagggacctactac
ttcttcgactgcctcaactggaggaaggtggccaaggaatttcatctggaatatgacaaa
ctagaagagcgacctcacgttccctccaccttcaactacaatcctgcccagcaggccttc
tga
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