Oreochromis aureus (blue tilapia): 116322128
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Entry
116322128 CDS
T07295
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116322128
Spliceosome [BR:
oau03041
]
Common components
Common spliceosomal components
General mRNP proteins
116322128
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
116322128
NCBI-ProteinID:
XP_031597996
Ensembl:
ENSOABG00000014845
UniProt:
A0A668U2J8
LinkDB
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Position
LG5:41978605..41992708
Genome browser
AA seq
499 aa
AA seq
DB search
MADDLDIEAMLEAPYKKEDAKISSPNGQDERSKRKKRSRSHDRKRSRSRDRKRSRSRERK
RSRSRDRRRSRSRSRERRRSRERGGRYRDHHKHRRRSRSKSPLRKEKSPIRQPIDNLTPE
ERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASSVP
LAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGTSGPMRLYVGSLHFNITEEMLRG
IFEPFGRIESIQLMMDSETGRSKGYGFITFADAECAKNALEQLNGFELAGRPMKVGHVTE
RTDASMASSLLDSDELEHTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGAIAIG
AMAAVTAAMNPALNMNMNSPALNLPSQPLATHCFQLSNMFNPSSEEAPGWELDIQHDVIE
ECNKHGGVVHIYVDKKSTEGNVYVKCPSIPAAMAAVNALHGRFFAGKMITAAYVPLPTYH
NLFPESVTATQLLAPPPRR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacctggacatcgaggcgatgctggaggcgccatacaagaaggaggacgcc
aaaatctcgagccccaacggacaggacgagcgctccaagaggaagaaacgcagtcgcagc
cacgacaggaagcgtagccggagtcgagacaggaagaggagccggagtcgggagcgcaaa
cgcagccgcagccgagacagacggaggagtcgcagccgcagcagagagcgccgccgcagc
cgagagcgcggcgggcgctacagagaccaccacaagcaccggcggcggtcgaggagtaag
agtcccctcaggaaggagaagagtccaatcaggcagcccatcgataacctgacgcccgag
gagcgagacgcccgcacggtgttctgcatgcagctcgccgcccgcatccgcccccgagac
ctggaggagttcttctctgcggtggggaaggttcgggacgtcaggatgatctctgacagg
aactctcgtaggtcaaagggcatcgcctacatagagttcgtggaggcaagttcagttcct
ctggccattgggctgacagggcaaaggctgctgggagttcccatcatcgtacaggcctcg
caggcagagaagaaccgagccgctgctgcagccaacaacctgcagaaaggaacatctgga
ccgatgaggctgtacgtcggctcgctgcacttcaacatcactgaggagatgctgcgaggg
atctttgagccatttggacggattgagagcatccagttgatgatggacagcgagacgggg
cgctccaaaggatacggcttcatcacctttgcagatgcagagtgcgccaagaatgctctg
gagcagctgaatggcttcgagttagctgggagacccatgaaagtgggtcacgtgaccgag
cggaccgacgcctccatggcgtcgtccctccttgacagcgacgagctggaacacaccggc
atcgacctgggaaccaccgggagactgcagctcatggcccgcctggctgagggtactggt
ctgcagatccctcctgctgctcagcaggctctgcagatgagtggtgctattgccatcgga
gctatggctgcagtgacagcggccatgaacccggctctcaacatgaacatgaactctcct
gctctgaacctcccgtctcagccgctggcgacgcactgcttccagctgtccaacatgttt
aaccccagcagtgaggaggctcctgggtgggagctggacatccagcatgacgtcatagag
gagtgtaataaacatggtggcgttgttcacatctacgttgacaagaagtccactgaggga
aacgtctacgtcaagtgtccttcgatcccagccgccatggctgccgtcaacgccctgcac
gggagattctttgctggtaaaatgatcaccgcggcatacgtccccctgcccacttaccac
aacctgttcccggagtctgtcaccgcgacgcagctgctggccccacccccacgccggtga
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