Oreochromis aureus (blue tilapia): 116322258
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Entry
116322258 CDS
T07295
Name
(RefSeq) semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
oau
Oreochromis aureus (blue tilapia)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Raftlin
Motif
Other DBs
NCBI-GeneID:
116322258
NCBI-ProteinID:
XP_039461532
Ensembl:
ENSOABG00000001171
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Position
LG22:complement(41172048..41275414)
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AA seq
1131 aa
AA seq
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MALTCWLSPWRPPPLLLLLLSSWLPAESASTTPFPKDLEPISVVSSEQSFQYPGFQGLLQ
DNDTLRLGLDFQRMLRINHVLYIAARDHVFAVNLTTASGEFVPQMKLTWKSNDVSKCTVR
GKNSDECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTSLEQVGEEVVGQARCPFESG
QSNVGLFAGGDFYSATMTDFLASDAVIYRSLGEGRPVLRTVKYDSKWLREPHFLHAIDYG
NYVYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDS
FFYFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKAFNGKFKEQRTS
DSSWTPVPDEQVPRPRPGTCAGDGSASEYKSSVQFPDETLTFIKSYPLMDEAVPSVNDRP
CFTRTSSRSKLTQIVVDVSAGPYKDRTVMFLGSDDGRVLKVLASTHPNDSFGSKLLEDID
VYNPSKCNVQGQEDRRVLGLELDKDHHALFVAFSSCVIRVPLSRCAQHGVCKKACLASRD
PYCIWLRTGSCANVAPGFKAGFEQEIEGEHSFHPDSCRADVLATTRNQESAADSAYGVRR
PPEMDQRAGANVHYTLLIACVLVAFFLGAILSGFLVSCYCGRSAAHRARRLGKDPEASLP
HALSLRSLAKLNGLLDGQPKEDKLDVSTPKMYSSFIPNGRAEHHLHSPVHQGLPLGDPEL
SLSQSLSQGDGELSGLPTPDSTPELPIKNMKALRHHQYEKNQNCNNARDKPSCSASSLGF
MAVVGNALNQQAFPFPHHHGNSVSNGTPHGAGASSTSLHLPEERKISNDERAAAAVGGGG
VPHHHHSQQSLPQTVVDVSALDELLKHIHEVSASGTGGIKVLTSTSSSSLFPGSSGSTAG
QHHSHHHHHAQTRTHHYNHGHHHSNHHNNNSGHQQQNETASYHSTSALPSDGLPKRFDPP
PQNTTSSSSSSSSSSNNPTSSTSIPSSSSSSSSTPLQQQVIPERPGGGGGVSVMRHHSQR
HSLIRMGSGSGAVPRHHSFNQRGPQHAHFLARMNTNNSSNNSDSPAPADSKQPSVASACL
TRQHSYSEGPHAQRAAVVRRTASLKPQLPPKPLFLPNTATSPGAEVGKYNY
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggccctgacctgctggctgtcgccatggcgacccccgcccctgctgctgctgctgctc
agttcctggttgccggctgagtcggcttcaaccacacccttccccaaagacctggagcca
atcagcgtggtcagctcggagcagtcgtttcagtacccggggtttcagggtttgcttcag
gacaacgacacgctgaggctgggcctggacttccagaggatgctacggatcaaccacgtg
ctgtacatcgcagcgagggatcacgtgttcgcagtcaacctgacgacggcttcaggggag
ttcgtcccacagatgaagctgacgtggaagtccaacgacgtcagcaagtgcacggtcaga
gggaagaacagcgacgagtgctacaactacgtgaaggtgttggttccccgaaacgacgag
acgctgtttgcctgcgggaccaacgccttcaacccgacctgccgaaactacaagatgacc
tcactggagcaggtcggggaggaggtggtgggtcaggctcgctgtcccttcgagtccggt
cagtccaacgtgggactgttcgctggtggagacttctactcggccaccatgacggacttc
ctggccagcgacgccgtcatctacaggagcctgggcgagggccgccccgtcctcaggacc
gtcaaatacgactccaagtggctgcgagagccgcacttcctgcacgccatcgactacggg
aactacgtctacttcttcctgagcgaaatcgcagtggagtacaccacgctgggcaaggtg
gtgttctctcgggtggcccgggtctgtaagaacgataacgggggatctcctagagttctg
gagcgatactggacgtccttcctgaaggctcggctcaactgctcggtgcccggagactcc
ttcttctacttcgacgtgctccagtcgctcaccaacgtgctgcagatcaaccagagaccc
gctgtggtcggagtcttcaccacgcaggccaacagtatccccggctcggccgtctgtgcc
ttctacatggacgacatcgagaaggcgtttaacgggaagttcaaagagcagaggaccagc
gactcctcctggactcccgtacccgacgagcaagttcccagaccgaggcccggtacgtgt
gcaggcgacggctctgcttcagaatacaaatcgtctgttcagttcccggatgagacgctg
accttcatcaagtcgtatcctctgatggacgaagctgttccctccgtcaacgaccggccc
tgcttcaccaggacgtccagcaggtccaagttgacccagattgtggtggatgtttctgct
gggccttacaaggaccggacggtgatgttcctgggctcagacgatgggcgagtcttgaag
gttttggccagcacccatccaaatgacagctttggatccaaactgctggaggacatcgac
gtctacaacccatccaagtgcaacgttcagggtcaggaggacaggagggttctgggcctg
gagctcgataaggaccatcacgccttatttgtggcgttcagcagctgtgtgatcagagtg
ccgctcagccgctgcgcccaacatggagtctgcaaaaaagcctgcctggcctctcgtgac
ccatactgcatctggcttcggaccgggagctgcgccaacgttgcgccgggtttcaaggcg
gggtttgagcaggagatcgagggcgaacactcgtttcatccggacagctgccgcgctgac
gtgttggccacgacacggaaccaggagtccgccgccgactccgcctacggcgtgcggcgc
cctccggagatggaccagcgtgcaggtgctaacgtgcactacacgctgcttatcgcctgc
gtgctggtggccttcttcctgggcgccatcttgtcgggtttcctggtgtcatgctactgc
ggccgcagcgccgcccaccgggcccggaggctggggaaggacccggaggcgtcgctgcct
cacgccctgtcgctgcgatccctcgccaagctcaacggactgctggacggacagcccaag
gaggacaaactggacgtgtccaccccgaagatgtacagttccttcatccccaacggccgg
gccgagcatcacctccacagccccgtgcaccagggcctcccgctgggcgaccccgagctc
agcctgtcacagtctctgtcacagggggatggcgagctctctggcctgcccacgcccgac
tccaccccggagcttcccatcaagaacatgaaggcgctgcgacaccatcagtacgagaag
aaccagaactgcaacaacgccagagacaaacccagctgctccgcctccagtctgggattc
atggccgtcgtcgggaacgccttaaaccagcaggcgtttcccttccctcatcaccatggc
aacagtgtaagcaatgggacgccccacggggccggcgcctcttcgacctctctgcacctc
ccagaggagagaaagatctccaatgatgagcgggcggcggcggcagtgggagggggagga
gtcccgcatcaccaccactcccagcagtccctcccccagacagtggtggacgtgtcggcg
ctggacgagctgctcaaacacatccacgaggtcagcgcgtcaggaaccggcggcatcaag
gtcctcacctccacctcctcctcctcgctgttccccgggtcgtccggctccaccgcaggg
caacatcacagccaccatcaccaccacgcacagacgcgcacacaccactacaaccacggc
catcaccatagcaatcaccacaacaacaacagcggtcaccagcaacagaatgagacggcg
tcctaccacagcacctccgcgctgccgagtgacggcctccccaaacgcttcgaccctcct
cctcagaacaccacctcctcctcatcttcatcctcctcatcctcaaacaaccccacctcc
tccacctccatcccctcatcatcctcctcctcttcctccactccgctccagcagcaagtg
attccagaacgacctggaggaggcggcggcgtctcggtgatgcgacaccactctcagcgt
cactccctcatcaggatgggcagcgggagtggcgccgtgccccgccatcacagctttaat
cagcgagggccgcagcacgctcacttcctcgccaggatgaacactaacaacagcagcaac
aacagcgacagccccgcccccgccgacagcaagcagccgtcggtggccagcgcctgcctc
acacggcaacacagctacagcgaggggccgcacgcccagcgggccgccgttgtccggaga
acggcgtcgctcaaaccccagctccctcctaaaccgctcttcctgccaaacacagccacg
tcaccgggcgcagaggtgggaaagtacaactactga
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