Oreochromis aureus (blue tilapia): 116322503
Help
Entry
116322503 CDS
T07295
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oau03009
]
116322503
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116322503
Ribosome biogenesis [BR:
oau03009
]
Eukaryotic type
Pre-60S particles
Helicases
116322503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
116322503
NCBI-ProteinID:
XP_039471768
LinkDB
All DBs
Position
LG7:44387351..44399590
Genome browser
AA seq
853 aa
AA seq
DB search
MAQRKKKLTKKKRHTANREPETDSDGDFELAVEIKNDDSPGRKLPRFPAASECLSDVEPD
TRELVRAQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKIPTPIQRKTIPVILDGKDVVAMA
RTGSGKTAAFLIPMFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGKFTGLKTALI
LGGDRMEDQFAALHENPDIIIGTPGRLMHVVMEMNLKLHSVEYVVFDEADRLFEMGFAEQ
LQEIIRRLPDTRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSDQIKLSFFHLRV
DDKPALLLHLLRNVVKPQEQTVVFAATKHHVEYLKELLSSEGLECAYIYSALDQTARKIN
IGKFVHRKAMVLLVTDVAARGIDIPLLDNVINYNFPSKAKLFLHRVGRVGRAGRSGTAYS
LICPDEMPYVYDLHLFLGRPVQFASPEHTEDSEGVFGRVPQRILDDESAHLITSHENSLD
LQNLLRVSENAYKQYLKSRPXPSPESIRRVKNVDLSSMGVHPVLGCGLEKMELECLQIVD
AIKSYKSKAVNHLEINSSSKTPASEVMRAKRSKDTGLVDKFSKQREDRAAESRLQQPINP
TTTADCDITEKEESDLNGVFSEVVGGKRRGQQEDGEERPKTKKKRQSGKDEEYYIPYRPK
DFDSERGLSLGGEGSAFEQQASSAVLDLMGDEGDRLNQEKKMMKWDRKKKKRFVRESGKE
DQKKKIKTDSGQVISNKKNRKNFYEEWKKKYKIDDTGSGSDGETGGGGRKPARGRGRGRR
GPNVQSSGDHKARSELKTKDQIMKQRKKKQKHQFLQGGGMSKLRSKNKKWLGEVKKSGFG
RGGHKKGKLRKKL
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagaaagaagaagctgacgaagaagaagagacacacagccaacagagagccg
gagacggactctgacggagactttgagctggctgttgaaattaaaaacgatgattcgcct
gggcggaaactgccacggttccccgcagcatcagagtgcttgtcagatgtggagccagac
accagggagctggtcagagctcaaaacaagaagaaaaagaaatctggagggtttcagtcc
atgggtctcagttaccctgtttttaaaggcgtcatgaagaagggttacaaaattcctact
cccatccaaagaaagactatacctgtaattttggatggaaaagatgttgtagccatggct
cggactggcagtggtaagactgctgccttcctgattcccatgtttgagaagctgaaggcc
cctcaggcccaaacaggagccagggccctcattctgacccccaccagggagttggcccta
cagaccatgaagttcacgaaagagctgggaaaattcaccggtctcaagactgctttgatc
cttggtggagacaggatggaagatcagtttgctgctctccatgaaaaccctgacataatc
atcggtacccctggtcgtcttatgcacgttgtcatggagatgaacctgaagttgcacagt
gtggagtatgtggtgtttgacgaggctgacaggttgttcgaaatgggttttgctgagcag
cttcaggagatcatccgcagacttccagacaccagacagactctgctgttttctgccacc
ctgcctaaactgttggtggagtttgccagagctggcctgacagaacctgtactgattcgt
ttggatgtggattctaagctcagtgatcagatcaagctgtcattcttccacctgcgtgtg
gatgacaagccggctctgctgctccacctcctgaggaacgtagtgaagcctcaggaacag
acagtggtctttgctgccaccaaacaccatgtggagtacctaaaggagctgctgtcgtca
gaaggtttagagtgtgcctacatctacagtgcccttgatcagactgccaggaagatcaac
attgggaaatttgtgcaccggaaagccatggtgcttctggtgactgatgttgctgctcgt
ggtatagacatccccctgctggataatgtcatcaattacaacttcccctccaaggccaaa
ctcttcttgcacagagttgggcgtgtgggacgagcgggccgaagtggcacagcctatagt
ctgatttgtcctgatgaaatgccttatgtctacgacctccacctcttcctagggcgacca
gttcagtttgcttcgcctgaacacacagaagattcagaaggtgtgtttggtcgagtccct
cagaggatcttggatgatgaaagtgctcatctgatcacgtctcacgaaaactcgctggac
ctgcaaaatctgctccgtgtctcagagaacgcctacaagcagtacctcaagtcgcggcca
naaccctcgccggagtccatcagacgggttaaaaacgtagatctgtccagcatgggtgtc
catccagtactcgggtgtggtctggaaaaaatggaactggagtgccttcaaatagtcgat
gccatcaagagctacaaatccaaagcggtgaaccatcttgaaatcaactccagtagtaag
acaccagccagtgaggtgatgcgggccaaacgctctaaagacactgggctagtggacaaa
ttcagcaagcagagagaggaccgagctgcagaaagcaggctgcagcagccaatcaacccc
accactactgctgactgtgacatcacagaaaaggaggagagtgatctaaatggggtgttt
tcagaggtggtaggtggtaaaagaagaggtcagcaggaagatggtgaagaacgaccaaag
accaagaaaaaaaggcagtcaggcaaagatgaagagtattatatcccttacagacctaaa
gactttgactctgagagagggttgagtctcggtggagagggcagtgcttttgaacagcag
gcctcttcagctgtccttgatctcatgggagatgaaggcgatcgccttaaccaggaaaaa
aaaatgatgaaatgggaccgtaagaagaagaagcgttttgtgagagaaagcggaaaagaa
gaccagaagaagaagatcaaaacagacagcggtcaggttatcagtaacaagaagaacagg
aagaacttttatgaggagtggaagaaaaaatacaagattgatgatacaggatctggatca
gacggagaaacaggcggaggaggcaggaagccagcaagaggtcgtggccgtggccgacga
ggtccaaacgtacagagctccggtgaccacaaagcacgctcggagctgaaaacaaaggat
cagatcatgaagcagcgcaagaaaaagcagaagcaccagttcctgcagggcggggggatg
agcaagctccgctccaagaacaaaaagtggctcggagaagtgaaaaagtcaggttttgga
aggggtggccataagaaaggcaagctgaggaagaagctgtga
DBGET
integrated database retrieval system
