Oreochromis aureus (blue tilapia): 116322817
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Entry
116322817 CDS
T07295
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X6
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oau04990
]
116322817
Domain-containing proteins not elsewhere classified [BR:
oau04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
116322817
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
DUF6215
Motif
Other DBs
NCBI-GeneID:
116322817
NCBI-ProteinID:
XP_031598853
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All DBs
Position
LG2:complement(24377782..24469527)
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AA seq
1129 aa
AA seq
DB search
MASPVADIGQSHQHHPVNESAAQSAFLEAQKWIEAVTGRCFGDKDFRGGLENGILLCELL
SSIRPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSTRPTAKGSD
GSRKLKNVLITIYWLGRAANSCTSYNGPTLDLKEFEGLLSQMRKETEEAESPKRSIRDSG
YIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPDVLVARGSSDGRGSDSESDG
APHRKMPDVRKDDMLARRTSVSEPRTAVPFNQYLPNKSNQSGYLPTPLRKKSNDKEEGGR
KSWSTATSPVGGDRPLRSVSMIDMRGEEEAALQPHSQVRHERMHNQYNKMKEEDDHWQDD
LARWKSRRRSISQDLIKKEEERKMMERLMSGDTYTSQRRRSIKTYREIVEDKERREEELR
QAYRKAKTPEEATAILQRYAQRFSISEAVLERLQLPKLLDRSISADPSFPTSPFPLSLSL
SASPTTPDPFDSDFNGPMRYLRQQSAPTPKFTSTFEARIEEFPKEPSSHQRSQIRSRSSE
PPSTRALSPKPVPLLMPKPYFQARPAGGETWNNKVDGLLRVNGDVGSDDVPTTPESQGRD
SPPHFQASPSQSKNSTVDGAADAPSSETSLRQSTHASSREGSPVSTKAKETQDVTEIASE
DTQEVQEEKVTESTPPSRPTSLPSELQKPQESFGKTGDQTAAASEEEKPNEAQQEQEMPK
PSSEDLSNLVQSGVDIQSYQPASDPCSQELLQKSEMASSSAPPGSSGYHQQWETKAELAN
SVRSSLATSSPKLRWEFFAPQEEAEKDLRGNVSVPVLPQAKRGDRWSWDPDEERKRQERW
QQEQERMLQEKYQREQEKLKEEWEKAQKEVAEEERKYHEEERRILEETVTPLTPHSSALP
SPSRGELSSISADPQDTIVRSLADWERKQELLERQSRESTESVDLKRRENDRTSDISTAD
DSMKTGRSSMSQSSSQAEKFGHSLQNGQKLPPVLAKSSTPVKKQQELPADGSKPPGGRRS
GPIDNNMGRSSSKNPAACPPSSDALPPAPNRSVSGKKLCSSCGQPLGKGAAMIIETLSLY
FHIHCFKCGVCKGQLGDTTTGTDVRIRNGLLNCHQCYIRSRSAGQPTTL
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccggttgcagacataggacagtctcatcagcatcaccccgtgaacgagtcg
gccgcacagtccgcgtttctggaggcgcagaaatggatagaggctgtgacaggaagatgt
tttggtgacaaggatttcagaggaggtttggagaatggaatactactgtgcgagttgctg
agctcaattagacctggacttgtgaagaaaatcaacagacttccaacaccaattgctggc
ctagacaacctcagtgtgtttttgcgtggctgtgaggagttaggactgaagggctcccag
ctctttgaccctggagacctgcaggacacatcaacacgccccacagccaagggaagtgac
ggcagtcgaaagctcaagaatgttttaattactatctactggttgggtcgtgctgccaat
agctgtacatcctacaacgggcccacattggacctgaaagagtttgagggcctgctgtca
cagatgcgaaaggagacagaagaggcagagagccctaaacgcagcatccgggacagtggc
tacattgactgctgggactctgagcgcagcgactctctctctccgccacgccacgggcgc
gaggattcattcgacagcctggactccttcggctcacgctcaagacaaaccccgtcacca
gacgtcctggtcgcccgcggcagcagtgatggccgtggcagcgactcggagtctgacggc
gctcctcaccggaagatgccagacgttcgtaaggatgacatgttggcacgacggacgtct
gtcagcgagccacgaaccgccgtaccctttaaccagtacctgcccaacaagagcaaccag
agtggatatctgccaacgccactacgcaaaaagagcaacgacaaagaggagggaggacgc
aagagctggagtaccgccacttcacctgtagggggtgacagacctcttaggagtgtgagt
atgatcgacatgcgtggtgaggaagaagccgcgttacagccgcacagtcaggtgcgtcat
gagcggatgcataaccagtacaacaaaatgaaggaagaggacgaccactggcaggatgac
ctggcccgatggaaaagtcggaggaggagtatttcccaggacctgatcaaaaaggaggag
gaaaggaagatgatggagcgcctgatgtcaggagacacctatacctctcagaggagaaga
agcatcaagacctatagggagatagtagaggacaaggagcgtcgtgaggaggagctacgg
caggcatataggaaagccaaaactcctgaggaggcgactgccattctccaacgttacgcc
cagcgattctccataagcgaagcagtcctcgaacgcctgcagctgccaaagttgttggac
cgcagcatatccgctgacccctccttccccacctcacctttcccgctctccctctccctg
tcagcctctcccacgacaccagaccctttcgattctgacttcaacgggcccatgaggtat
ctgcgccagcagtctgccccaactccaaagtttacttctacatttgaggcacgaatcgag
gagtttcccaaagaaccgtcctcacaccagcggtctcagatacgctctcgttcctctgaa
ccgccatcaacccgagccctgtcacccaaaccggtgcctttgctgatgcccaagccttat
ttccaggcccgacctgcaggaggtgaaacttggaacaacaaggtggatggtttgctgcga
gtaaatggtgacgttggaagtgacgatgttcccaccacacctgagagtcaagggagggac
tcgcctcctcattttcaggcatccccttcccaaagcaaaaacagcactgtagatggtgct
gcagatgctccctcgtcagaaacctcactccgtcagagtacccacgcctcttctagggag
ggaagtccagtgtcaacaaaggcaaaggagacacaagatgttacagagatagcttctgag
gacactcaggaggtccaggaggagaaagtcactgagtcaacaccgcccagccgccccacc
tcactcccatcagagctgcagaagccacaggaaagctttggaaagactggagaccagaca
gcagctgcttcagaggaagaaaagccaaatgaagcccagcaagaacaagaaatgcccaaa
ccatctagtgaagacctctctaatcttgtccagtctggggttgatatacagtcatatcag
ccagccagtgatccctgttcccaggagctcttacagaaatcagagatggcatcaagctca
gctccaccaggatcatctggttatcaccagcaatgggaaacaaaagcagagcttgcaaac
agtgtcaggtcttcgctggcaaccagcagccctaaattacgctgggagttcttcgctccg
caagaagaggccgaaaaggatctccgtggaaatgtgtcagttccggtgttaccccaggcc
aagcggggagaccgctggtcttgggacccggatgaggagcgaaagcgtcaggaaaggtgg
cagcaagagcaggagcgcatgctgcaggagaagtaccagcgtgagcaggagaaactgaag
gaggagtgggagaaagcacagaaggaggtggcagaggaggagaggaagtaccacgaggag
gagcgtcggatactggaggaaaccgtgacgcctctgacgccccactcttccgccctgccc
tcccccagtcgaggtgaactctcctccatctcagctgatcctcaggacactatcgttcgt
tctctggctgactgggaacgtaaacaggaactgctggagaggcagtcgagggagagcaca
gagagcgtggatctgaaacggagagaaaatgaccggactagtgacatcagcaccgctgat
gacagcatgaaaacaggcagaagctcaatgagtcagagcagcagtcaggcggagaaattt
ggtcacagcctacagaatggccaaaagcttcctccagtgctggccaagtcttcaactcca
gtcaagaaacaacaagaactcccagcagacggcagcaaacctccaggaggacgaaggagt
ggccctattgataataacatgggccgcagctcatcaaaaaaccctgcagcatgcccacca
tcctctgacgcactgcctccagcacccaacaggtctgtcagtgggaagaagctatgttcc
agctgtggtcagccattagggaaaggggccgccatgatcatagagaccctcagcctctat
ttccacatccactgttttaagtgtggagtgtgtaaaggacagttaggtgacacaaccaca
gggacggatgtccgaataagaaacggcctcctcaactgccaccagtgctacatccgctcc
cgctctgccggacagccaaccacattgtga
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