Oreochromis aureus (blue tilapia): 116323224 Help Entry 116323224         CDS       T07295                                  Symbol xab2 Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism oau  Oreochromis aureus (blue tilapia) Pathway oau03040   Spliceosome Brite KEGG Orthology (KO) [BR:oau00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     116323224 (xab2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oau03019]     116323224 (xab2)    03041 Spliceosome [BR:oau03041]     116323224 (xab2) Messenger RNA biogenesis [BR:oau03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      116323224 (xab2) Spliceosome [BR:oau03041]  Complex B   Other components    Prp19-related factors     116323224 (xab2)  Complex C     116323224 (xab2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_12 TPR_2 TPR_8 TPR_15 TPR_16 ARM_TT21_C NRDE-2 ARM_TT21 Tcf25 TPR_1 Motif Other DBs NCBI-GeneID:  116323224 NCBI-ProteinID:  XP_031599361 Ensembl:  ENSOABG00000009710 LinkDB All DBs Position LG4:complement(12266215..12272764) Genome browser AA seq 849 aa AA seqDB search MKTLNGKTDVIFEDDDLPYEEEIIRNPYSVKCWMRYIEFKQNGPKSTLNMIYERALKELP GSYKLWYNYLRERRKQVKGKCITEPAYEEVNNCHERALVFMHKMPRIWMDYCQFLVSQCK ITRSRRTFDRALRALPVTQHPRIWPLYLRFVRDLPLPETAIRVYRRYLKLSPENAEEYID YLRSVGRLDEAAVRLAAVVNDENFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIR GGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEES MIAAKMETTAEMGQDEDDDIDLELRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVK LYDGNPRQIINTYTEAVQTIDPMKATGKPHSLWVFFAKFYEENEQLDDARTIFEKATKVN YKQVDDLAAVWCEYGEMELRHENYEQALRILRKATAIPSKKAEYFDASEPVQNRVYKSLK VWSMLADLEESLGTFQSTKAVYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGI ALFKWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEE YGLARHAMAVYERATQAVETEERHLMFNIYIKRAAEIYGVTYTRAIYQKAIEVLPDEHAR DMCLRFADMESKLGEIDRARAIYSYCSQICDPRVTANFWQTWKDFEIRHGNEDTIREMLR IKRSVQATYNTQVNFMSSQMLKATTSSTGTVSDLAPGQMGIDDMKMLEQKAQQLAAEAEQ DKPKPKEKILFVRSDTSRSELAELAKQANPDEIDIDDDEDEEDEDQGPDEVQLEQKSVPT AVFGGLKDD NT seq 2550 nt NT seq  +upstreamnt  +downstreamnt atgaaaacattaaacggaaaaaccgatgtcatatttgaggacgacgatctaccttatgaa gaggagatcatcaggaatccatattcagtcaagtgctggatgcgttacatcgaattcaaa cagaatggaccaaaatctaccctcaatatgatatatgagcgggctctaaaagaactccct ggcagctataagttgtggtacaattatctgagagagaggcgaaaacaagtcaaagggaaa tgtatcacagaaccagcctatgaagaagtcaataattgtcatgaaagggcactagtgttc atgcacaagatgcctagaatatggatggattactgccagttccttgtgtctcaatgcaag atcacaagaagtcgtagaacatttgaccgagcacttagagctcttcctgtaactcagcac ccacgcatctggcctctgtatctccgctttgtccgtgacttgccattgcctgaaacagcc atccgagtgtaccgcaggtaccttaagctttctccagaaaatgcagaagaatacatagac tacttgcggtctgttggccgcctcgatgaagcagctgtgcggctagcagctgttgtcaat gatgaaaactttgtgtccaaagagggaaagtctaactatcaactgtggcatgaactatgt gacctgatctcccagaatcctgacaaggtgacctctctgaatgtaggagccatcattcga ggaggcctcactcgcttcacagatcaacttggaaaactttggtgctccttagctgactat tacatcaggagtggccactttgagaaagcacgtgatgtctatgaagaggccatccttaca gtagtcactgtaagggatttcacacaagtgtttgacagttatgctcaatttgaggagagc atgatcgctgctaagatggagactacagctgagatggggcaggatgaggatgatgacata gacctggagctaagacttgcccgctttgagcagctcattgcccggcgacccctcttgttg aacagtgtactcttgagacagaacccccataatgttcatgagtggcacaagcgggtaaaa ctgtatgacggaaatccacgacagatcatcaacacatacacggaggcagtccagactatt gatccaatgaaggccacagggaaacctcactcgctctgggttttctttgctaaattctat gaggaaaatgagcagctggacgatgcgaggacaatctttgagaaggctaccaaggtgaac tacaaacaggtggatgacctcgctgcagtgtggtgtgaatatggagagatggaacttcgt catgagaattacgaacaggcactacgaattctgaggaaagcaacagctatcccatccaag aaagcagagtactttgatgcttctgagcctgtccaaaacagagtctacaagtccttgaag gtctggtcaatgctggcagacttggaggaaagtcttggcactttccagtctactaaagca gtttatgaccggattattgatctccggattgccactccacagatcatcatcaattacgcc atgttccttgaagagcacaactactttgaggaaagctttaaagcatatgaacgtggtatc gctcttttcaagtggccaaatgtttacgacatctggaacacttacctcaccaagtttatt gatcgatatgggggcaagaagttggaaagagccagagatttatttgaacaggcattggat ggctgcccagccaaatttgctaagactatttatctactgtatgccaagttggaggaggag tatggattggcacgacacgctatggctgtatatgaaagagcaacacaggcagtagaaact gaggagagacatctcatgtttaacatctacatcaagagagcagctgaaatttatggagtt acgtataccagagcaatctaccagaaggctattgaggtccttcctgatgagcatgcaaga gacatgtgtctacggtttgctgacatggagagtaaacttggtgagattgatcgtgctaga gcaatctactcctactgctcccagatctgtgacccaagggtgacggctaatttctggcaa acctggaaagattttgagatccgccatggaaatgaggacacgattagagagatgttgagg atcaaacgaagtgtccaggctacatacaacacacaggtcaactttatgtcctctcagatg ctgaaggccacaacaagctccacaggcactgtgtcagatcttgctccaggccagatggga attgatgatatgaagatgttggaacagaaagcacaacagcttgctgcagaggctgaacag gacaagcctaaacccaaagagaagattctctttgtcaggagtgacacttctcgcagtgag ctggcagaacttgccaaacaagccaatcctgatgaaatagacatcgatgatgatgaggat gaagaagatgaagaccaaggaccggatgaggtgcagcttgaacagaagagcgtccctaca gctgtttttggaggccttaaagatgactag

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