Oreochromis aureus (blue tilapia): 116323611
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Entry
116323611 CDS
T07295
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04137
Mitophagy - animal
oau04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
116323611 (rabgef1l)
04137 Mitophagy - animal
116323611 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116323611 (rabgef1l)
Membrane trafficking [BR:
oau04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
116323611 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
116323611 (rabgef1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
116323611
NCBI-ProteinID:
XP_031599830
Ensembl:
ENSOABG00000004102
UniProt:
A0AAZ1XE13
LinkDB
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Position
LG14
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AA seq
504 aa
AA seq
DB search
MMSQRRGIHLDQSELLCKKGCGFYGNTAWQGLCSKCWREENQREKQKQIQEDWALAERLQ
REEEEAYASRQQKTQSQPSITPFSKFEERKTKEKSSKVNTVTKFFIPSTKTPPKKDAPPF
DTQSSPSPSSSTSRQSSVDSDIATQEFIDFLKPLKSGREIFKQCRAFTETMVYKRDIGAD
ELSECVQDFYQNLSERLQTQFKGSSDQVECIMDEVEKYMMTRLYKEAFCPETTDDEKKDL
AIQKRIRALHWVTIEMLCVPVDEEIPEVSDSVVKAITDVIEMDSKRVPKNKLACITRCSK
HIFNAIKVSKKEAASADDFLPTLIYIVLKANPPRLHSNIQYITRFCNPSRLMTGEDGYYF
TNLCCAVAFIEKLDGQSLNLSSEEFELYMSGQASPHWPLTSGATSSSSNTALSQVHKRLD
LLTGLGERQERVIEKARQLESDLIDWTDEVEQKVQSVLESFPPDMQNPPAPTASGTAAAS
SAIDSDNVENELLPPPLQPQVFAG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccagcggcgtgggatccatctggaccaatcagagctgctatgcaaaaaagga
tgtggtttttatggcaacactgcttggcaaggcctgtgctcaaagtgctggcgagaagaa
aatcagcgagaaaagcaaaaacagattcaggaggactgggcactcgctgaaaggttgcag
agagaggaagaggaagcatatgcaagccgacaacagaagacccaatcacagccttccatt
acaccttttagcaagtttgaggagagaaaaactaaagaaaagtccagcaaagtcaacacg
gtcacaaagttttttattccgtccacaaaaacaccaccaaaaaaagatgctcctcctttt
gacacgcagtctagccccagccccagctcatccacaagccgacagtcatctgtggacagt
gacatcgcgacacaagagtttattgattttcttaagcctctgaagtctggcagggagatc
ttcaaacagtgtcgggccttcactgagaccatggtctacaagagggacataggagctgat
gagctgtcagagtgcgtgcaggacttctaccagaacctttcagagcgcctccagacccag
ttcaaaggttcgtctgatcaagtagagtgtattatggatgaagtggaaaagtacatgatg
actcgtctctacaaggaagccttctgtccagaaacaactgatgatgagaagaaagacctc
gccattcagaagaggatcagagccctgcactgggtcaccattgagatgctgtgtgttcct
gtagatgaggagatccctgaggtttctgacagcgtagtcaaagccatcacagacgtgatc
gaaatggattcgaagcgcgtgcccaagaacaagctggcatgcattactcgttgtagcaag
cacatcttcaacgctatcaaagtcagcaagaaagaggctgcgtctgcagacgacttcctc
cccacactgatctacatcgtgctgaaagcaaacccaccgcgactgcactccaacatccaa
tacatcacccgtttctgcaaccctagcagactcatgactggagaggacggctactatttc
accaatctgtgctgcgcagtggccttcattgagaaattggatggccagtctctgaacctg
agctctgaggagtttgagctttacatgtcgggccaggcgtccccacactggccactcacc
tccggagccacctcctcctccagcaacaccgctctcagtcaggtccacaaaaggctggat
ctgctgacggggctcggggaaaggcaggagcgcgtcatcgagaaggctcgccagctggag
agtgacctcattgactggaccgatgaagtggagcagaaagtgcagagcgttctggagagt
tttccacccgacatgcaaaaccctcctgcacccacagcgagtgggactgcagcagcttca
tcagcaatagactcggataatgttgagaatgagctcctgccaccaccactgcagccacaa
gtgtttgctggttga
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