Oreochromis aureus (blue tilapia): 116323990
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Entry
116323990 CDS
T07295
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04350
TGF-beta signaling pathway
oau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116323990 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116323990 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oau04515
]
116323990 (neo1a)
Cell adhesion molecules [BR:
oau04515
]
Immunoglobulin superfamily
DCC/UNC5 family
116323990 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
fn3_2
NDNF
C2-set_2
Tissue_fac
Sp38
EphA2_TM
DUF4834
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
116323990
NCBI-ProteinID:
XP_039463598
Ensembl:
ENSOABG00000025051
LinkDB
All DBs
Position
LG1:complement(11947397..12099090)
Genome browser
AA seq
1490 aa
AA seq
DB search
MAERGALSLLSLLCLTFLYTETTAAKHVDKGSAVQPFSPFWFTVEPQDTLAIRGNSAFLN
CSAHSDAATPAHIEWKKDGTFMSLVSDERRKILPNGTLFFTHVVHSKHNKPDEGTYQCVA
TIENLGSISSRTARLSVAGMPRFASQPLPATARLGDSQVMACEVNSDLVAFIRWEKDRQP
LELSTRLIQLPSGALVISNASETDAGTYRCLVENVGSSKLSDEAELQTVPETGEERKLEF
LVQPVSVTKVTDASVLLPCVATGYPAPRISWMFGDKLLEESDGRVEVLGGGSLQISNLTE
ADAGIYTCVADNSNTTIEAQAQLTVQVPPQFVKRPANVYAHESMDIIFECDVSGSPAPTV
KWVKNGDAVIPSDYFKIIEDHNLQILGLVKSDEGFYQCLAENDAGNIQSSAQLIILDPVV
ALPSFPPPSLTPNTTDHVTPGSRGVGSPAGPTPSAPRDVVASLVSTRFIKLTWRQPAEPH
GDELTYSIFYSQEGTSRERVVNTSRPGEMQVTIQNLMPDTKYRFRVVAHNSNGQGESSAA
LKVATQAEVQVPGPAPNLQAVSNTPTSVSLSWDKPLTGNGEILSYKLYYTDKSVGKEQDI
DIDGQSYSMAGLKKNTEYSFRVVANNRHGPGVSTEDVVVRTLSDVPSAPPQNLTIEVQNS
KSIMLRWQPPPLSGQNGKITGYKIRYRKGSRRSESETTEGTQLYKLMDGLEHGTEYSFRV
SAMTVNGTGPATEWMTAETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDIMVR
GYAIGYGIGSPHAQTIKVDYKQRYFTIENLDPSSHYVITLKAFNNVGEGIPVYESAVTRA
QSDPDVDLYDLLHAPYTPVPDPLPMMPPVGVQASVLSHDTIKVTWADNSLPKSQKVTDNR
YYTVRWKTNIPANTKVKMVNTTNLSYTVPDLKPNTLYEFSVMVTKGRRVSTWSMTAQGTT
FETTPSSAPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAVVHDWVIEP
VVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEPVQFRTPKTSNLTPKMGPSGNQPP
RDPVPPRIKDGENHILVIVIIISVGAFTIIVVVVGAFLCTRRTTSHQKKKRAASKSSNGS
HKYKGNSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETPIPRTSQDITPADSGLESNP
HLQQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHHHYYN
MGSLSSATRSYLYHQGSGYPRPHTCTTPISHLDRVDSTESVRNTPSSEPAPPATASSQAS
CPSEILADPEGSYHGSTTTEEEPSYSSNLPPLRSAHPHAHAHPLKSFAVPAIPASSHPSY
ESPALPSTPLLTQTGPPTHPHVVKTASIGTLGRTRTPMVVTVPNAPDVPETSKMLEDVDS
VLASLPPCPSPAPRSNPVPLPQSYEPDELTEEMAHLEGLMKDLNAITTAP
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgtcgctcctctctctcctctgtctcacctttctctacacg
gagaccaccgctgcaaagcatgtcgacaaaggttcagcagtgcagcccttcagccccttc
tggttcaccgtggagccccaggacacgctggccatccgggggaactccgctttcctcaac
tgctctgcacacagcgacgcagccacgccggcacacatcgaatggaagaaagacggcacc
ttcatgagcctggtttcagacgagaggagaaaaatactgcccaacggcacgctgttcttc
acccacgtggtccactctaaacataacaagcccgacgaaggaacctaccagtgtgtcgcc
accattgagaacctgggatccatttccagccgcacggcacgcctctctgtagcagggatg
cccaggttcgccagccaaccgttgccagccactgcgcgacttggggacagtcaggtgatg
gcatgtgaggtcaactcggatctggtggccttcatccggtgggagaaagaccgacaaccc
ctggagctgagtaccaggttgatccagctaccgagtggagccctggttataagcaatgcc
tcggagacggacgctggcacgtaccgctgccttgtggaaaacgttggctcttccaagttg
agcgatgaggccgagctccaaactgtaccagaaactggagaggagaggaagctggaattc
ctggtgcagcctgtgtctgtgaccaaggtgacggatgccagcgtgctgctgccctgtgtg
gccacgggttaccctgcaccacgaatcagctggatgtttggagacaagctgctggaagag
agtgatggtcgtgtggaggtgctgggagggggcagtctccaaatttccaacctcacggag
gcagacgcagggatctacacctgtgttgcagacaattccaacaccaccattgaagcccag
gcccaactcacagtacaagttcccccgcagttcgtgaagcggccggccaacgtttatgcc
cacgagtccatggacatcatctttgagtgcgacgtgtcggggtcaccggctcccacggtc
aaatgggtcaagaatggagacgccgtcattcccagcgattacttcaaaataattgaggac
cacaacctgcagattttgggtctggtcaagtcagacgagggcttctaccagtgcctggca
gaaaacgatgcgggcaacatccagtccagcgcccagcttatcatcctggatccagtcgta
gccctgccctctttccctcccccttcactgactcctaacactactgaccatgtaacacca
ggctccagaggtgtaggcagtccagcagggcctaccccctcggccccccgagacgtcgtg
gcttcgctggtgtccactcgcttcatcaagctgacctggcgtcaaccagccgagccgcac
ggagacgagttgacctactccattttctacagccaggagggcacgagcagggagcgagtc
gtgaataccagtcgtccaggggagatgcaggtcaccatccagaacctcatgccagacacc
aaatatcgcttcagggttgtggcccacaatagcaacggccagggcgagagctctgcagcg
ctcaaagtggccacccaagctgaagtccaagtacccggcccggctcctaacctgcaggcg
gtgtccaacacgccgacctccgtttctctcagctgggacaaacccctcactggcaatgga
gagatcctctcgtacaagttgtactacacggacaagagcgtcggcaaagagcaggatatt
gacatagatggccagtcgtacagcatggcggggctgaagaagaacacggagtacagtttc
cgcgtggtggccaacaacaggcacggtcctggcgtctccactgaggacgtcgtcgttcgc
actctgtctgacgtaccaagtgccccgcctcaaaacctgaccatcgaggtccagaactca
aagagcatcatgcttcggtggcagcccccgcccctgagcggccagaacgggaaaatcacc
ggctacaagatacgataccggaaaggatcccgcaggagcgaatctgaaaccactgaaggc
acccagctttacaagctcatggatggtctcgagcatggaacagagtactccttccgagtg
tcagccatgacggtaaatggcacgggaccggccaccgagtggatgacggcagagacgttt
gagagcgacttggatgagtcccgcgttccggaccagcctagctcgctgcacgtccggccg
ctggtcaacagcatcgtggtgagctggacgccgccggagaaccaggacattatggtgcgc
ggttacgcgatcggctacggcatcggcagtccacacgcgcagaccatcaaggtggactac
aagcagcgctacttcactatcgagaacctcgaccccagctcccactacgtgatcacacta
aaagccttcaataacgtgggtgaaggcattcctgtgtacgagagcgccgtcaccagagca
cagtcagaccccgatgttgacctgtacgacctcttacatgctccatacaccccagtacca
gaccctctccccatgatgccgccggtgggcgttcaggcgtcagtgctgagccacgacacc
atcaaggtgacctgggccgacaactcgctgcccaagagccaaaaggttacagataaccgc
tactacacagtgcgatggaagaccaacatccctgccaacactaaagtgaagatggtcaac
accaccaacctgagctacacggtgccagatctgaagcccaacacgctgtacgagttctcc
gtcatggtgaccaaagggcgccgcgtcagcacatggagcatgacagcccagggcaccacc
tttgagaccactcccagctccgccccgaaggatgtgactgtggtgagcaaagagaacaaa
ccacgcaccataattgtcaactggcagcctccctctgaggccaatggaaaaatcactggc
tatatcatctactacagtacagatgtaaacgccgtggtccacgactgggttatcgaacca
gtggtgggcaatcgtctgactcaccagatccaggagctaacgctggacaccacctactac
ttcaagattcaggcccgaaactcaaagggcatgggccccatgtctgagcccgtgcagttc
cgcactccaaaaacctcaaatctcacaccaaagatgggaccttcaggaaaccaacctcca
cgggaccctgttccaccaagaattaaagatggggaaaatcatatcctggtcattgtcata
atcatctcagtgggagctttcaccatcatagtggtggtagtgggggccttcctgtgcacg
cggcgcaccacatcccaccagaaaaaaaaacgggctgcctcaaaatcctccaacggctct
cacaaatacaaggggaactccaaagacctgaagccacccgatctttggattcaccacgag
aggctggagcttaaacccatggacaagtcgccagatcccaacccagtcatgactgaaacc
cccatcccccgcacctcacaggacatcacccctgctgacagcggattggaaagcaacccc
cacctgcagcagaggcgcaactcctaccgtggccacgaatcagaggacagcatgtctaca
ctagcaggccgacgagggatgaggcctaaaatgatgatgccttttgatgcgcagccgcct
cagcccgtgattagcgctcaccccatccattccctcgataaccatcaccactattataac
atgggcagcctgtcgtcggcaacacgcagctacctctaccaccagggcagcgggtaccca
cgcccgcacacctgcaccacccccatctctcatctagacagggtggactccacagagtct
gtgaggaacactcccagctctgagcccgcccctcccgccaccgcctcctcccaagcctcc
tgcccctcagagatcctggctgacccagagggcagctaccacggctccaccaccacagag
gaggagcctagctactccagcaacctgcccccactccgctcagctcacccgcatgcccac
gcccacccgctcaagagcttcgctgtacctgcaatcccagcctccagccacccatcctat
gagtctcccgccttgcccagcactcccctgctcactcagaccgggcctcccactcacccg
catgttgtgaaaacagcctccatcggaacactaggaaggacacgaacaccgatggtggtc
actgtgcccaacgcccccgatgtaccagagaccagcaagatgctagaagatgtagacagc
gtgcttgcctccctccccccctgcccctcccccgccccccgcagtaaccctgttcctctc
ccccagagctacgagcccgacgagctgaccgaggagatggcccacctcgagggcctgatg
aaggacctgaacgccatcaccacagcgccatga
DBGET
integrated database retrieval system