Oreochromis aureus (blue tilapia): 116324081
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Entry
116324081 CDS
T07295
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04140
Autophagy - animal
oau04148
Efferocytosis
oau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116324081 (vps11)
04148 Efferocytosis
116324081 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116324081 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116324081 (vps11)
Membrane trafficking [BR:
oau04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116324081 (vps11)
Hops complex
116324081 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-C3H2C3
zf-rbx1
zf-RING_2
Beta-prop_EML_2
TPR_GEMI5
Kbp-5
zf-C3HC4
TSGP1
zf-ANAPC11
Csm1_N
Motif
Other DBs
NCBI-GeneID:
116324081
NCBI-ProteinID:
XP_031600482
Ensembl:
ENSOABG00000002741
LinkDB
All DBs
Position
LG10:complement(6669217..6687219)
Genome browser
AA seq
937 aa
AA seq
DB search
MTTPQSANTIKMAAFLQWRKFVFFDKDTVKDPDDNGKNFPLPKGISASDSGRGHIVLGDM
EGKIWLLMRSLQLMSFQAYKLRVTHLYQLKQHSILVSVGQDEHGINPVVKVWNLDKRDSG
NPLCTRIFPAIPGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHE
GASPVTGLAFRQVAKVTHLFVATLEKVYCYTLSIKEYPKVELDTHGCALRCSSLADPSQD
SQFIVAGEECVYLYQPDERGPCFAFDGHKLLVHWHRGYLFLLIRDVKSPNKTCFSSGETS
PSDKQLLTIYDLDNKFIAYSASFDDVIDVVAEWGSFYILTRDGKMFVLQEKDTQTKLEML
FKKNLFVMAINLAKSQHLDSDGVSDIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVI
RKFLDAQRIHNLTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSENEVHFD
VEIAIKVLRQAGYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESNM
KRYGKTLMHHVPEGTTLLLKGLCTNYQPSGDAAEKDSLDRSVVSKANSEEFIPIFANNPR
ELKAFLEHMIEVDPRSPQGVYDTLLELRLQDWAHEQDPERKKVLQGEAVLLLRSDNTVFD
KALVLCQMHNFKEGILYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQECCLWEQAL
GYFARKEEDCKTYISEVLHHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLLRENQ
QIEDDERKIRQYRDETAHLRSEIQELKTSAKIFQKTKCNMCNSPLDLPSVHFLCCHSFHQ
HCFESYAESEAECPTCTPENRKVMDMLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGR
GVFNKLTLVTDPPGSKSVGNLEVNLQRDLLIHTKRNS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaccccagtctgccaatactatcaaaatggcagcgttcttacagtggagaaaa
tttgtcttctttgataaggatacagtgaaggacccagatgacaatgggaaaaactttcct
ctccctaaagggatctcggcttctgactccggtcggggtcatatcgttctcggagatatg
gaaggtaagatctggcttttgatgcgctctttgcagctgatgtcttttcaggcctacaag
ttgcgagttacacatctctaccagcttaagcagcacagcatccttgtatcagtgggtcag
gatgaacatggaataaaccctgtagtaaaggtctggaacttggacaagagggacagtgga
aatcccctctgcactaggatttttcctgcaattccaggcaacaaaccaactgaagtttct
tgcctcagtgtgcacgaaaacctaaactttatggcaattggcttcacagatggcagtgtg
gttttgaccaaaggtgacatcaccagagatcgtcacagtaaaactctgactctgcacgag
ggagctagccctgtcactggcctcgccttccgccaagtagcaaaagttacccatctgttt
gttgccaccctggagaaagtctactgttacaccctgtccatcaaggagtatccaaaagtg
gagctggatacacacggctgtgcactgcgctgctcatcgttggcagatccatcccaggat
tctcagttcattgtagctggtgaagaatgtgtgtacctgtatcagcctgatgaacgaggg
ccctgttttgcttttgatggacacaagctattggtccactggcaccgtggatatctgttt
ttactcataagggatgtaaagtcacccaacaagacatgcttcagtagtggggagacctcg
ccgtcagacaaacagctgctaactatctatgacctggacaacaaattcattgcctacagt
gcctcttttgatgatgtcattgacgtggtagcagagtggggttccttctacattctcacc
agagatggaaaaatgtttgttctccaggagaaagacacacagaccaaactggaaatgctg
tttaagaagaatctgtttgtgatggccataaacctggctaagagtcagcacctggacagt
gatggggtatcagatatcttcagacaatatggtgatcacctgtaccttaagggggaccat
gatggtgccattcagcagtacattcgcaccattgggaagctggagccatcatatgtcatc
aggaaatttctagatgcacagaggatccacaatctgacagcctatctgcaagccctgcac
aggcagtcattggccaatgcagatcacactacactgctgctcaactgttataccaagctc
aaggacagttccaagctggaagagttcattaagagcagtgaaaatgaagtacactttgat
gttgaaatcgccatcaaggttctccggcaggctggctaccacagccacgctgtgttcttg
gctgagaaacatatgcaccatgagtggtacctaaagatccagctggaggacttgaagaat
tatcaagaaggcctgcggtacattggacgtctgccttttgaacaagctgaaagcaacatg
aagcgttatggcaagacactgatgcaccatgtccctgaaggtaccacactcctcctgaag
ggcttatgcactaattaccaacccagtggagacgctgctgaaaaagacagcctggacagg
agtgtggtcagtaaggcaaactcggaggaattcatcccgatttttgccaataaccctcgg
gagctcaaagccttcctggagcacatgattgaggtggacccccgttctccccagggtgtg
tatgacacactactggaactacggttgcaagactgggcacatgaacaagatcctgagagg
aaaaaggtcctgcagggggaagctgtgttgctactgaggagtgacaacactgtgtttgac
aaggcccttgtcctctgccagatgcacaacttcaaagaaggcatcctctacctgtatgaa
aaaggcaaactgtaccagcagattatgcactaccacatgcagaatgaggagtatggaaaa
gtagtggaggcctgcaaacgttatggggaccaagagtgttgcctttgggagcaggcgctg
ggatactttgccagaaaggaagaggactgcaaaacttatatcagtgaggtcctacatcac
attgatcaaaacaacctgatgcctccattacttgtggtgcagacattagcccacaactcg
acagccactctctccgtcatcaaagactacctcatcaacaaattacttagagagaaccaa
cagattgaggatgatgaacggaaaatccgacagtatcgcgatgaaacagctcaccttcgc
tcagaaatccaggagctcaaaacaagtgccaagatattccagaagacaaagtgtaacatg
tgcaacagccccctggacctgccatctgttcatttcctgtgctgccactccttccaccaa
cactgctttgaaagctatgctgagagcgaagcggagtgcccaacttgcactccagaaaac
cgtaaagtcatggacatgctgcgtgcccaagaccaaaaacgcgatttgcacgatcacttc
aacagacagttacgcagctctaatgatggattctctgtagtagctgattattttggccga
ggagtcttcaacaaattgactctagttactgacccacctggcagcaaatctgtagggaat
ctggaagtcaacctgcagagggaccttctcatccacaccaagagaaatagctag
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integrated database retrieval system
