Oreochromis aureus (blue tilapia): 116324198
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Entry
116324198 CDS
T07295
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1 isoform X2
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116324198 (prdm1c)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116324198 (prdm1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-met
zf-C2H2_jaz
zf-C2HE
zf-C2H2_15
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
116324198
NCBI-ProteinID:
XP_031600631
Ensembl:
ENSOABG00000021510
LinkDB
All DBs
Position
LG15:complement(13140625..13155989)
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AA seq
784 aa
AA seq
DB search
MCGSSQGFTAASSCTSIMLTSEKSAQTVGATAGMPGKHDVDMTSWSEADFEENCTYIVKD
QPLEGESENNCKTRAERSLPRNLALKRCHDSAEVLGVMTKEIIPKGTRFGPLVGESYTNE
TLPKDADRKYFWRVFSEGRLHHILDGLNEERSNWMRYVNPACSVEEQNLVACQSGLDIFF
YTTKRLQPGQELLVWYCSEFAQRCNYPPLGQLAIDKNEQSPAKKTTRKRGHTVSEILQDD
PSKSPSNCIRRLDSFLPQTNVSADFPLCPSVVYPPQPISESMHANRYAFLPPLPSCSPPA
AKRQALSIPVPANVHFAFQHSQGPPVAKPYQDPCMPDMANSTLMHGPYLLPHYSLGLLPH
SYPFYRDRLKPHLAVSPHVSPFHNYAHFQSPLTSGCKDLTRALSDSKPDLFLSPIREHRD
NKDLISKRRAYLSIPSHDLRDFKHSPPTNIHTDLAMPATSTASSMVTKICEAQPSLAPGG
CSPQEGMAASSNCLPSNFTSATQSEAEDAMDLSKTKQSGQIIGYKTLSYPLMRQNGKIRY
ECNICGKVFGQLSNLKVHLRVHSGERPFRCQTCNKNFTQLAHLQKHYLVHTGEKPHECKV
CHKRFSSTSNLKTHQRLHSGEKPYHCKLCPARFTQFIHLKLHKRLHTGERPHRCPHCPCA
YLHYCSLQVHLQGFCPLLPLASHRYSSEELCRVNSEIERFDVSEAAEELEAMAAEVDMDK
GNVTDLIQKIETCVSGHRDADRGESERTNYKSAKERSGVQLHHSSPVPLHPASIKLESSC
IAEP
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctcacaaggctttacagccgcctcttcatgtacctcaatcatgttaacc
tcagagaagtcagctcaaactgtgggtgccactgcagggatgccaggaaaacacgatgtt
gatatgacatcatggagcgaggcagactttgaggagaactgcacttacatcgtgaaggac
caacctctggaaggcgagtccgaaaacaactgcaagacacgagctgagagatcgttgccc
aggaacctggccctgaaacgctgccacgactcagcagaggtgcttggggtgatgactaag
gagatcattccgaagggaacacgttttggccctttggtgggggagagctacaccaacgaa
actctgccgaaagacgccgacaggaagtacttttggagggtcttctcagaggggcgctta
caccacattctggatgggctgaatgaagagcggagcaactggatgcgttacgtcaatcca
gcatgctctgtggaagagcagaacctggttgcatgccagagtggcttggacatcttcttc
tacaccaccaaacggcttcagccaggccaggagcttctggtgtggtactgctctgagttt
gcccagcgttgtaactaccctccactgggacagctggctatcgacaaaaacgaacagagt
ccagcgaagaagacaacaaggaaacgaggtcatacagtctctgaaatcctacaagacgac
ccctccaaatccccttctaactgcatcagacgtctagacagttttttgcctcagacaaat
gtctcagcagattttcctttatgtcccagcgttgtctacccacctcagcctatctccgaa
tctatgcatgctaatagatatgcatttctaccacctctgccatcctgtagccctccagct
gccaaaaggcaagcactaagcattcctgtccctgctaatgtccactttgcctttcagcac
agtcaaggccctcccgtagcaaagccttaccaagatccctgtatgcccgatatggctaat
tctactctaatgcacggcccctatctactgccccactactcacttggccttctacctcat
tcatatccattctaccgtgatcgactgaaacctcacttggcagtctcaccccatgtatcg
ccctttcacaactatgcacattttcaatcgcctttaaccagcggttgcaaagacttgaca
cgtgcactttctgattccaaaccagacctctttctttcaccaatccgtgagcacagagac
aacaaggacctcatatccaaaagaagagcctacctcagcatcccctcacacgacctcaga
gatttcaaacactcccctcccaccaacattcacacagacctcgctatgcctgccacatcc
accgcctcatctatggtcactaaaatctgtgaagcacagccttctctcgctcctggagga
tgctcgccgcaagagggaatggcagcctcctcaaactgcctcccttccaattttacctct
gccacgcaaagtgaagctgaggatgcaatggacctaagcaagacaaagcaaagtgggcag
ataattggctacaagaccctgtcctaccctctgatgaggcagaatggaaagatccgatat
gaatgcaacatctgtggaaaggtctttgggcagctgtctaaccttaaggttcatctgcga
gtacacagcggggagcgtcccttcaggtgtcagacctgcaataagaacttcacacagcta
gcacacttgcagaaacactacctggttcatacaggagaaaagccccatgaatgcaaggtg
tgccacaagcgattcagcagcactagtaacttgaagacccaccagcggctacactcaggt
gagaagccttaccattgcaagctctgccctgctcgctttactcagttcatccacctcaaa
ctccacaagcgcctccacactggcgagcgaccacaccgctgtcctcactgcccctgtgcc
tatctccattactgcagcctccaagtgcacctccaaggcttctgccctctcttgcccttg
gcctcacacagatactcgtcagaggagctatgtcgagttaactctgagattgagaggttt
gacgtgagtgaggcagcagaggagcttgaagccatggctgcagaggttgatatggacaag
gggaatgttaccgacctaatacagaagatagagacctgtgtctcgggccaccgggatgct
gacagaggggagtctgagagaaccaactacaaatcagcaaaagagcgctcgggtgttcag
ctgcatcacagcagtcctgtacctctgcatccagccagcatcaagctggagtcaagctgc
atagcagagccctaa
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