Oreochromis aureus (blue tilapia): 116324330
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Entry
116324330 CDS
T07295
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oau02000
]
116324330 (tmc1)
03037 Cilium and associated proteins [BR:
oau03037
]
116324330 (tmc1)
Transporters [BR:
oau02000
]
Other transporters
Pores ion channels [TC:
1
]
116324330 (tmc1)
Cilium and associated proteins [BR:
oau03037
]
Other cilia and associated proteins
Stereociliary proteins
116324330 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
116324330
NCBI-ProteinID:
XP_039476998
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All DBs
Position
LG12:26209776..26225623
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AA seq
931 aa
AA seq
DB search
MVEKFFQDHERKMPRDSLITSENDSEQDAGLSLQEEHESKTHRTKRRDGDRQKKKRRNER
RKGGTRAGEGEEDLQAVSEKRERSKRKRAKSKQETSRRENNEEEEAQLTGGKGTKARKDI
RNEKTRRMEKEEVREVEENVDKGKKKQGSTKKGEKKEDGGKQLVKGKAREVKKKKHKKAE
TSSEPETSEEDDDEEEDNDKDVVRLECLSPEELEKLKEAVDERKKLIQSLRGKPWAMKKK
LVTLRESQEFVEKYEGALGKGKGRKLYAYKVLMTKKWMKFQRDFENFKTACIPWEMKIKE
IESHFGSSVASYFLFLRWMYGINMILFGLTFGLVMVPEALMGRPYGSMPRKTVPRAEEAS
AMDFAVLWDFGGYAQYSVLFYGYYNNQRTVGWLKFRMPLSYFLVGVGTVAYSYMVVIRTM
ARNANESGVGDDNSFNFSWKMFTSWDYLIGNAETADNKFASITTSFKEAILEEQESHKDD
NIHLTRFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALDGLENHTWWERNEVNMVMSLL
GMFCPMLFDVISTLENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINLKRKEEKIVK
FNITTWEASLYNGTVSENSTASPVTIHPADVPRGPCWETMVGQEFVRLIISDTMTTYITL
LIGDFLRAVLVRFLNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGSFYAPCLPA
LNVIRLHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVSIP
PSFDCGPFRLAIYYLQSTSKSYREANVELKKKLQMQNEENKRKNKRAALKAQMDLEEARM
TAQEQQRNNNASVQDQENDTDIHGSGQRPYQEKYGCNPPPPVGGRGRQMPSSRDPGSRTY
NRGNHGPSGYLPGFARQSEPRMYRVPSLQRH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggtggagaaattcttccaggaccatgagaggaagatgcctcgggacagtctgatcacc
tctgagaatgacagtgaacaagatgcaggtttgtccttgcaagaggaacatgagagtaaa
acacacagaacaaaaagaagagatggtgacagacagaaaaagaagaggagaaatgagaga
agaaaaggaggaacaagggcgggagaaggggaagaggacttacaggccgtatctgagaaa
agagaaagaagcaagcgaaaaagagctaagagtaaacaagaaacaagcagaagagagaac
aatgaagaggaagaagctcaactaacaggtggcaagggaacaaaagcaagaaaggatatc
agaaatgaaaaaacacgcagaatggagaaggaggaagtgcgagaagttgaagaaaatgtt
gataagggaaaaaagaaacagggaagtaccaaaaagggagagaagaaagaagatggaggt
aaacagctggtaaagggaaaagcccgggaagtaaaaaagaaaaagcacaagaaggctgaa
acaagttcagagccagagacaagcgaagaggacgatgatgaagaagaggacaatgacaag
gatgtggtgaggctggagtgtctctctccagaggagctggagaagctgaaggaggcagtg
gatgagaggaagaaactgatccaaagtctaaggggaaaaccctgggcgatgaaaaagaaa
cttgtcactttaagggagtctcaggagtttgtggaaaaatatgaaggcgccttgggaaaa
ggaaaaggcaggaagctctatgcatacaaagtcctgatgaccaagaaatggatgaaattc
caacgggactttgaaaacttcaaaactgcatgcatcccatgggagatgaaaataaaggag
attgaaagtcattttggctcctcagttgcctcatactttctctttctgaggtggatgtac
ggcatcaacatgatcttgtttggcctgacctttggcctggttatggtaccggaggcatta
atggggcgaccttatgggagcatgccaagaaagactgtccccagagctgaggaggccagt
gcgatggactttgctgttctttgggactttgggggttacgcacagtactcggtcctcttc
tatggctactacaacaaccagcgtacggttggctggctcaagtttcgcatgcctctgtct
tacttcctggttggtgtcggtacagtggcctatagctacatggtagtcatcagaacgatg
gcacgtaatgcaaatgaatcaggggtcggcgatgataacagcttcaatttcagctggaaa
atgttcaccagctgggactacctgataggaaatgctgaaacagcagacaataagtttgct
tccatcaccaccagcttcaaggaggcaatcttagaggagcaagagagccacaaggatgac
aacatccatctgactcgattcttgcgtgtgctggccaacttcctggtcttgtgctgctta
gcaggaagtggatacctcatctactttgtagtgcgccgttctcagaaatttgccttagat
ggactggagaatcatacgtggtgggaaaggaatgaggtgaacatggtcatgtcattactg
gggatgttctgtccgatgctgtttgatgtaatcagcaccctggagaattaccacccgcgg
gttgccctgcagtggcagctcggtcgcatctttgccctcttcttgggaaatctctacacc
ttcattattgcactcatggatgagatcaaccttaaaaggaaagaagaaaagatagtgaag
tttaatataaccacgtgggaggccagtctttacaatggcaccgtttcagaaaacagcact
gcttcacccgtcacgatccaccctgctgatgtgcccagagggccttgctgggagacaatg
gtcggccaggagtttgttcgcctgatcatatctgacacaatgacaacttacatcacactg
ctgatcggtgacttcctgagagcggttcttgttcgttttctcaactactgttggtgttgg
gacctagaggctgggtttccatcctactctgagtttgacgtcagtgggaacgttttgggc
ctgatcttcaatcaaggaatgatatggatgggttccttctatgcaccctgtctgcctgcc
ttaaacgtcatccggctccatgtctccatgtacctgcagtgctgggctgttatgtgctgt
aatgtgccacaagaaagggtcttcaaagcctctggctccaacaacttctacatggccatg
ttgctggtcatcctctttctgtccacactgcctgccatctacaccattgtctccatcccc
ccttcatttgactgtggacccttcagactggccatttattacttgcaatctacatccaaa
agctacagagaagcaaatgtggagctgaagaaaaagctacaaatgcaaaatgaggagaac
aagaggaagaacaaacgagcagcgctgaaagctcaaatggatttggaggaggccagaatg
actgcacaagagcaacaaaggaacaacaatgcttcagtacaggatcaagaaaatgataca
gatatccatggcagcggtcagaggccgtatcaggaaaagtatggatgcaaccctcctcct
cctgttggaggcagaggacgccagatgccatccagcagagaccctggctcaaggacctac
aaccgtggcaaccacgggccttctggatacctgcctggttttgctcggcaaagtgagccc
aggatgtacagggtgccgagcctgcagagacactga
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