Oreochromis aureus (blue tilapia): 116324531
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Entry
116324531 CDS
T07295
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03018
RNA degradation
oau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116324531 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
116324531 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116324531 (lsm7)
03041 Spliceosome [BR:
oau03041
]
116324531 (lsm7)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116324531 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
116324531 (lsm7)
Spliceosome [BR:
oau03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
116324531 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
116324531
NCBI-ProteinID:
XP_031601010
Ensembl:
ENSOABG00000007250
LinkDB
All DBs
Position
LG23:complement(45359528..45361976)
Genome browser
AA seq
103 aa
AA seq
DB search
MADKDKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagacaaaaagaaaaaggagagcatcttcgacttgtccaaatacatcgat
aagccgattcgtgtaaagtttcaaggaggacgagaagccagcggtgtccttaaaggattt
gaccctctgctgaacctggtgctggacggcactattgaatacatgcgcgatccagatgac
cagctgaagctgacagaagacaccaggcagctggggctggtggtctgcagaggaacctcc
gtagtgctgatctgtcctcaggatggcatggaagccataccaaacccgttcatacagcag
caggacggctaa
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