Oreochromis aureus (blue tilapia): 116324796
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Entry
116324796 CDS
T07295
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b
KO
K13091
RNA-binding protein 23/39
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116324796 (rbm39b)
Spliceosome [BR:
oau03041
]
Common components
Common spliceosomal components
General mRNP proteins
116324796 (rbm39b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
116324796
NCBI-ProteinID:
XP_031601403
Ensembl:
ENSOABG00000020974
UniProt:
A0A668V4T3
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All DBs
Position
LG20:complement(15226196..15233879)
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AA seq
498 aa
AA seq
DB search
MADDFDVEAMLEAPYRKDENKSSHANGHDDQSKKKRRSRSRSPGSKKKRSRSKSKDRKKS
KKRSKSRERKRSRSRERHRSRSRSKDRAGRYRARRSPIRKRSRSRSPFKKEKSPIRAPID
NLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVE
SSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSSGPMRLYVGSLHFNITE
EMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKV
GHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQMTG
SIPFGGIGAPAAVPTPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPSWAAEIQDDVIE
ECNKHGGIVHIYVDKNSPQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYH
NLFPDSVTAKQLLMPSRR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactttgacgttgaggccatgctggaggctccatacagaaaggatgagaac
aagtcctctcatgcaaatggacacgatgaccagagcaagaagaaaaggaggagtcggagc
cggagcccaggctccaagaagaagaggagcagaagcaaaagcaaagacagaaagaagagt
aagaagaggagcaagagccgggaaagaaaaagaagccgcagcagagagcgccatcgcagc
cgctcccgaagcaaagatcgagctgggcggtacagagcacgcaggagtccgattcgcaaa
cgttccagaagtcggagccccttcaaaaaagaaaagagccccattagggcaccaattgac
aatctaacaccagaggagagagatgcccgcactgttttctgtatgcagcttgctgcaaga
atcagagctcgggacctggaggatttcttctcagctgttggaaaagttagagatgtgaga
ataatctctgacagaaactccaggagatcgaaggggattgcatacatagagtttgtggag
tcctcctctgtacctctggcaattggattgactgggcagaggcttttaggagtgcccatc
atcgtccaggcatctcaggcagagaaaaatagagcagcagctgctgccaataatctgcag
aagggcagttcgggtccgatgcgcctgtatgtgggctcactgcacttcaacattactgaa
gaaatgcttcgagggatttttgagccctttggaaagattgaaggaatccagcttatgatg
gacagcgagactggccgatccaaaggatatggcttcatatcgtttgcagatgcggaatgt
gcaaaaaaggcattggagcagctgaacggctttgagctagccggacggccaatgaaggtg
gggcatgttacagagcgctcagactcttcaacagccagctcgttcctggataatgacgaa
ctagagaggactggtattgacctaggcactactgggcgtctacagctgatggctcgacta
gcagaagggactggtctgaagatccctcctgctgctcagcaggctctacagatgactggc
tccataccctttgggggcattggtgctccagcagctgttccaactccagctccaagccaa
gctttgaacctcccatctcagccactggccacacactgccttcagctgtccaacctgttc
aacccacaagcggaaaatgatcccagctgggctgctgaaattcaagatgatgtgattgag
gaatgcaacaaacacggtggaatcgttcacatttatgtcgacaagaactctcctcaaggt
aacgtgtatgtgaagtgtccctcgataccagcagccatggcgactgtaaatgcacttcat
ggacgctggtttgcaggtaaaatgataacagctgcctatgttcctttaccaacctaccac
aaccttttccctgattcagtaacagcaaagcagcttctaatgccgtcacgccgatag
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