Oreochromis aureus (blue tilapia): 116325270
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Entry
116325270 CDS
T07295
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03040
Spliceosome
oau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116325270 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116325270 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116325270 (srsf5b)
Spliceosome [BR:
oau03041
]
Common components
Common spliceosomal components
SR proteins
116325270 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
DUF7376
Motif
Other DBs
NCBI-GeneID:
116325270
NCBI-ProteinID:
XP_031601971
Ensembl:
ENSOABG00000012656
UniProt:
A0A668TKU0
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All DBs
Position
LG15:complement(16505561..16512101)
Genome browser
AA seq
295 aa
AA seq
DB search
MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGGGGGGRFSDRYGRGSQNSRSRNPPPMRTENRLIVEN
LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASHSDLKNALDKLSGKEINGRKI
KLIEAAKKRSRSRSRSESSSRSRSRSRGRSASRSPRRSRSPAKAHNRSRSRSGSPAGGAS
SPTSKSKEPAKRSSKMSKSATPPSPAPAQRASASRSRSRSRSRSRSRSPSTDSQR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcgtattttcatcggccggctgagcccctcggccagagagaaggatgtg
gagaggtttttcaaaggatacggccgcatccgagatatcgacctgaagagaggattcggc
tttgtggagtttgacgaccccagagatgcagaagacgctgtttatgagcttgatggcaaa
gagctgtgcaatgaaagggtgaccattgagcatgctcgtgtgcgtctgcgtggtggccgc
ggacgcggtggcggcggcggagggggacgtttctctgatcgctacggccgcggctcccag
aacagccggagtcgtaaccctcctccaatgcgcaccgagaaccgcctgattgtggagaac
ttgtcctctcgagtcagctggcaggacctgaaagatttcatgaggcaagctggagaggtg
actttcgcagacgcacatcgtcccaagctcaacgaaggggtggttgagtttgcttctcac
agtgacctgaaaaatgcacttgacaaactctctggaaaggaaattaatggcagaaaaatc
aagctcatcgaagctgccaagaagaggtcgagaagtcgctcacggtctgagagttcctct
cgttcgcggtcccgttcccgtggtcgctctgcatcacgctccccaagacgctcccgcagc
cctgccaaagcccacaaccgttcccggtcccgtagcggttcacctgccggcggcgcctct
tccccgacctccaaatctaaggagcccgccaagcgctcctccaagatgagcaaatcggcg
accccgccctcccccgcgcctgcccagagagcctccgcctcccgatcccgctcgcgttca
cgctcccgctctcgctctcgttctccttctactgacagccagcgctaa
DBGET
integrated database retrieval system
