KEGG   Oreochromis aureus (blue tilapia): 116325328
Entry
116325328         CDS       T07295                                 
Name
(RefSeq) DNA repair protein RAD50-like
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03440  Homologous recombination
oau03450  Non-homologous end-joining
oau04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    116325328
   03450 Non-homologous end-joining
    116325328
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    116325328
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oau03032]
    116325328
   03400 DNA repair and recombination proteins [BR:oau03400]
    116325328
DNA replication proteins [BR:oau03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    116325328
DNA repair and recombination proteins [BR:oau03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     116325328
    BRCA1-C complex
     116325328
   NHEJ (non-homologous end-joining)
    MRX complex
     116325328
SSDB
Motif
Pfam: Rad50_zn_hook SbcC_Walker_B Golgin_A5 AAA_21
Other DBs
NCBI-GeneID: 116325328
NCBI-ProteinID: XP_039463478
Ensembl: ENSOABG00000018629
UniProt: A0A668UR11
LinkDB
Position
LG23:complement(24167133..24187903)
AA seq 1205 aa
MSCSLIENKYSFKSEEQNIKRAKDGRRVSRSVKCGDLHQEITSALGVSKSVLNDVIFYHQ
EESNWPLSEDRVLKEKFDSIFNVIKYNKARAKMHELRLKQSQRVEQCQAELFYLEKNKEK
AQQLRDNVAKKQADLRASQDLILQIENKINPLETLLSDIKMKLENVTKLENEIKALDSLR
KQMEEHIKELEETMEEVFQGSDEQLQHTYENHQRTVREKEQKLQQHQEELQTFDQEYQRL
TRVTNDLLVEKGRLQHEAERHTKNTEDRDKLVHSLSSCLEMEGYDQLPFTVSQLESFYHQ
VTQRLEQEKERVSQLLAELQKLEQQKQQSVDEMRDRKTCMERTVEMKRDEQQKKQQELKN
ITEELQRLQDSSSRLQELENKLAEVEREDAVQSSSVEELKAEVEELQREKVELDCTQRQL
DEEMETLNMHTAALTQMDILKKGKAEMEEQILQIRSRHCEDLVSLLGHFPNKKELEDWIS
SKSKEISSTGDRLTKLKMDLASNEQNKSHITAELLKKEQQLATDEEKFLNVCSSRDLEQN
LSNLQRDLDEIFKTKALLAGTKVVYTQFISELSEHREPCCPVCRRSFPSESEVQEVVRVL
QSKLHLVPEKLKITEQDLERTERRREEIVALRPVREAIVQFQENELPALRKRLQTVDREA
ERLKGDVEEQEALLAILRSEEEKAKDCLQGISLMDSYLRNLEGVERKIDQQASKLQEVNL
DNTFQQLSQEKQETQDQLDTTYSTIVRKHKQIQDQQEQIQRLKSAAIEMRDEQLQLIRDK
QKQQHLEELSAEITARMEALTTEIREGNEELRPLSAALEKLQQEKQKLVEQKKQREEEEQ
RKIRNIEERLKEITALQRDVTKYVDEGRDKYKEDKESEYQAATTQLQEAERNKERISTEM
GNIQQDKDTQKVKECCLWDNLTLRKRVNELKNMAAKHEALQEELSYMQVSQLQRQREEEE
SKLAELKSERSREEGAQKPLEEQILEYSKQLEEDQYGKAEELHRDKVIEMRTTQLLSKDL
KLYEEALDQAIVKFHSMKMDEINQNIRDLWRSTYRGQDIEYIEIRSEVEERSEGRRSYNY
RVVMMKGDADVNMRGRCSAGQKVLASLIIRLALAEAFCLDCGILALDEPTTNLDRENIES
LADALVQIIRTRSQQRHFQLLIITHDEDFVQLLVRSGCIQHFYRISKNQDQNSEITKHST
AFLSV
NT seq 3618 nt   +upstreamnt  +downstreamnt
atgtcctgctctctgatagaaaataaatactcctttaaaagtgaagagcagaacattaaa
agagcaaaggatggaaggagggtgagcaggtctgttaagtgtggcgacctgcaccaggag
ataacgtctgcgctgggtgtatcaaagtcagtgttgaatgacgtcatcttctatcaccag
gaagagtctaactggccacttagtgaagacagagttctcaaagaaaagtttgactccatc
ttcaatgtaatcaagtataacaaagcgagggcgaagatgcatgagctgcgtttgaagcaa
agtcagagagtcgaacagtgtcaggcagagctgttctacctggagaaaaacaaggagaag
gcccagcagcttagagacaatgtagccaaaaaacaggctgatctgagggcctcacaagat
ctgatcctgcaaatagagaacaagatcaatccacttgagacactgctgagcgacataaaa
atgaaacttgaaaatgtgacgaagctagaaaatgaaatcaaagctctggacagcttgagg
aaacagatggaggagcacatcaaggagctggaggaaactatggaagaggtgtttcagggt
tcagacgagcagctacagcatacttacgagaaccaccagaggacagtgagggagaaagag
cagaagctgcaacagcaccaggaggagctgcagacctttgaccaagaataccagagactg
accagagtcacgaatgatctgttggtagaaaaaggtcgtctacaacatgaagctgaacgt
cacactaagaacactgaggaccgcgacaaactggtccactctttgtcatcctgtctggag
atggagggttatgaccagctgccctttaccgtttctcaactcgagagcttttaccatcaa
gtcacacaaaggctggagcaggaaaaggagagagtcagtcagcttttggcagagctgcag
aaactggagcagcagaagcagcagtctgttgatgaaatgagggacaggaagacgtgcatg
gagagaacggtggagatgaaaagagacgagcagcaaaagaagcagcaagagctgaaaaac
atcacagaagagctgcaacgactgcaggattcatctagtcgactgcaagagctggaaaat
aaactggctgaagtggagcgtgaggatgcagttcagagctccagcgtggaggagctgaag
gccgaggtcgaggagctccagagagaaaaggttgaactcgactgcacacagagacagctc
gacgaagagatggagacactcaacatgcacacagctgcactcacacagatggacatactg
aaaaagggcaaagccgagatggaggagcagattcttcagatccggtctcgtcactgtgag
gatctggtgtctctattgggccactttccaaacaagaaagagctggaggactggatctct
tccaagtcaaaggaaatcagcagcaccggggacagacttacaaaactcaaaatggacttg
gcatcaaatgagcagaataaaagccacattactgctgagctgctgaagaaggaacagcag
ttagccacagatgaagagaagttcttgaatgtttgcagcagtcgagatctggagcagaac
ctgagcaacctgcagagagatctggacgagatattcaagacaaaagctctactagctgga
actaaagtggtgtacacccagttcatcagcgagctgagcgagcacagggagccctgctgc
cccgtgtgccgacgatcgtttccctcagagtctgaggtgcaggaagtcgtcagagtcttg
cagtctaaactacacctggtgccagaaaaactgaagatcactgagcaggacctggagagg
acggagaggaggagagaggagatagtggctctcaggcctgtgagggaggccattgtgcag
tttcaggaaaatgagctgccagcgttgaggaagcggctgcagactgtggacagagaagct
gagaggctgaagggtgatgtggaggagcaggaggctctgctcgccatcctgaggtctgag
gaggaaaaagccaaagactgcctgcagggcatttccctcatggactcatacctgagaaac
cttgaaggggtggaaaggaaaattgatcagcaggcatccaaactccaggaagtaaacctg
gacaacacatttcagcagctcagtcaggagaaacaagaaactcaggaccagctcgacacc
acttacagcacaattgtgcgtaaacataaacagatccaggaccagcaggagcagattcag
aggctgaaaagtgcagcgatagagatgagagacgagcagcttcagctgatcagagacaaa
cagaagcagcagcacctggaggagctgagtgcagagatcactgctaggatggaggcctta
accacagagatcagggagggaaatgaagaactgcgccctctatcagctgctctggagaag
ctgcagcaggaaaagcaaaagctggtggagcagaagaagcagagagaggaagaagagcag
aggaagattcgtaacattgaggagagactgaaggaaatcactgccttgcaaagagacgtc
actaaatatgttgatgagggaagagacaaatacaaagaggacaaagagtcagagtatcaa
gcagcaacgactcagctccaagaggctgagaggaataaagagaggatcagcacagagatg
ggaaacatccagcaggacaaagacactcaaaaggtcaaagagtgctgcttatgggacaac
ctgaccttgaggaagcgcgttaatgagctgaagaacatggcggccaaacatgaggctctg
caggaagaactgagctacatgcaagtctcgcagcttcagcgacaacgtgaggaagaggaa
agcaagctggccgaactgaagagtgagcgcagtcgggaggagggcgcacagaaacccctg
gaggagcagatactggaatacagcaaacagctggaggaagatcagtacggcaaagccgag
gagctccacagagacaaggtgattgagatgaggaccacacagctgctcagcaaagacctg
aaactctacgaagaggctctagatcaagccatcgtgaagttccacagcatgaagatggat
gagatcaaccagaacatcagagacctgtggcgcagcacctacaggggtcaagatatcgag
tacatcgagatcaggtctgaggtggaggagaggtcagaggggcggaggagctacaactac
agagtagtgatgatgaaaggagacgcagacgtgaatatgagagggcgctgcagtgccggt
cagaaggtgctggcatccctgatcatccggctcgctctggcagaggccttctgtctcgac
tgtggaatcctggccctggatgagcccaccaccaacctggaccgggagaacatcgagtcc
ctggcagacgctctcgtacagatcatcaggactcgctctcagcagcgtcacttccagctg
ctgatcatcactcatgacgaggactttgtgcagctgctggttcggtccgggtgcatccag
cacttctaccgcatcagcaagaaccaggaccagaactcagagatcaccaagcacagcaca
gccttcctctctgtgtga

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