Oreochromis aureus (blue tilapia): 116325328
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Entry
116325328 CDS
T07295
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03440
Homologous recombination
oau03450
Non-homologous end-joining
oau04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116325328
03450 Non-homologous end-joining
116325328
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
116325328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oau03032
]
116325328
03400 DNA repair and recombination proteins [BR:
oau03400
]
116325328
DNA replication proteins [BR:
oau03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
116325328
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
116325328
BRCA1-C complex
116325328
NHEJ (non-homologous end-joining)
MRX complex
116325328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad50_zn_hook
SbcC_Walker_B
Golgin_A5
AAA_21
Motif
Other DBs
NCBI-GeneID:
116325328
NCBI-ProteinID:
XP_039463478
Ensembl:
ENSOABG00000018629
UniProt:
A0A668UR11
LinkDB
All DBs
Position
LG23:complement(24167133..24187903)
Genome browser
AA seq
1205 aa
AA seq
DB search
MSCSLIENKYSFKSEEQNIKRAKDGRRVSRSVKCGDLHQEITSALGVSKSVLNDVIFYHQ
EESNWPLSEDRVLKEKFDSIFNVIKYNKARAKMHELRLKQSQRVEQCQAELFYLEKNKEK
AQQLRDNVAKKQADLRASQDLILQIENKINPLETLLSDIKMKLENVTKLENEIKALDSLR
KQMEEHIKELEETMEEVFQGSDEQLQHTYENHQRTVREKEQKLQQHQEELQTFDQEYQRL
TRVTNDLLVEKGRLQHEAERHTKNTEDRDKLVHSLSSCLEMEGYDQLPFTVSQLESFYHQ
VTQRLEQEKERVSQLLAELQKLEQQKQQSVDEMRDRKTCMERTVEMKRDEQQKKQQELKN
ITEELQRLQDSSSRLQELENKLAEVEREDAVQSSSVEELKAEVEELQREKVELDCTQRQL
DEEMETLNMHTAALTQMDILKKGKAEMEEQILQIRSRHCEDLVSLLGHFPNKKELEDWIS
SKSKEISSTGDRLTKLKMDLASNEQNKSHITAELLKKEQQLATDEEKFLNVCSSRDLEQN
LSNLQRDLDEIFKTKALLAGTKVVYTQFISELSEHREPCCPVCRRSFPSESEVQEVVRVL
QSKLHLVPEKLKITEQDLERTERRREEIVALRPVREAIVQFQENELPALRKRLQTVDREA
ERLKGDVEEQEALLAILRSEEEKAKDCLQGISLMDSYLRNLEGVERKIDQQASKLQEVNL
DNTFQQLSQEKQETQDQLDTTYSTIVRKHKQIQDQQEQIQRLKSAAIEMRDEQLQLIRDK
QKQQHLEELSAEITARMEALTTEIREGNEELRPLSAALEKLQQEKQKLVEQKKQREEEEQ
RKIRNIEERLKEITALQRDVTKYVDEGRDKYKEDKESEYQAATTQLQEAERNKERISTEM
GNIQQDKDTQKVKECCLWDNLTLRKRVNELKNMAAKHEALQEELSYMQVSQLQRQREEEE
SKLAELKSERSREEGAQKPLEEQILEYSKQLEEDQYGKAEELHRDKVIEMRTTQLLSKDL
KLYEEALDQAIVKFHSMKMDEINQNIRDLWRSTYRGQDIEYIEIRSEVEERSEGRRSYNY
RVVMMKGDADVNMRGRCSAGQKVLASLIIRLALAEAFCLDCGILALDEPTTNLDRENIES
LADALVQIIRTRSQQRHFQLLIITHDEDFVQLLVRSGCIQHFYRISKNQDQNSEITKHST
AFLSV
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgctctctgatagaaaataaatactcctttaaaagtgaagagcagaacattaaa
agagcaaaggatggaaggagggtgagcaggtctgttaagtgtggcgacctgcaccaggag
ataacgtctgcgctgggtgtatcaaagtcagtgttgaatgacgtcatcttctatcaccag
gaagagtctaactggccacttagtgaagacagagttctcaaagaaaagtttgactccatc
ttcaatgtaatcaagtataacaaagcgagggcgaagatgcatgagctgcgtttgaagcaa
agtcagagagtcgaacagtgtcaggcagagctgttctacctggagaaaaacaaggagaag
gcccagcagcttagagacaatgtagccaaaaaacaggctgatctgagggcctcacaagat
ctgatcctgcaaatagagaacaagatcaatccacttgagacactgctgagcgacataaaa
atgaaacttgaaaatgtgacgaagctagaaaatgaaatcaaagctctggacagcttgagg
aaacagatggaggagcacatcaaggagctggaggaaactatggaagaggtgtttcagggt
tcagacgagcagctacagcatacttacgagaaccaccagaggacagtgagggagaaagag
cagaagctgcaacagcaccaggaggagctgcagacctttgaccaagaataccagagactg
accagagtcacgaatgatctgttggtagaaaaaggtcgtctacaacatgaagctgaacgt
cacactaagaacactgaggaccgcgacaaactggtccactctttgtcatcctgtctggag
atggagggttatgaccagctgccctttaccgtttctcaactcgagagcttttaccatcaa
gtcacacaaaggctggagcaggaaaaggagagagtcagtcagcttttggcagagctgcag
aaactggagcagcagaagcagcagtctgttgatgaaatgagggacaggaagacgtgcatg
gagagaacggtggagatgaaaagagacgagcagcaaaagaagcagcaagagctgaaaaac
atcacagaagagctgcaacgactgcaggattcatctagtcgactgcaagagctggaaaat
aaactggctgaagtggagcgtgaggatgcagttcagagctccagcgtggaggagctgaag
gccgaggtcgaggagctccagagagaaaaggttgaactcgactgcacacagagacagctc
gacgaagagatggagacactcaacatgcacacagctgcactcacacagatggacatactg
aaaaagggcaaagccgagatggaggagcagattcttcagatccggtctcgtcactgtgag
gatctggtgtctctattgggccactttccaaacaagaaagagctggaggactggatctct
tccaagtcaaaggaaatcagcagcaccggggacagacttacaaaactcaaaatggacttg
gcatcaaatgagcagaataaaagccacattactgctgagctgctgaagaaggaacagcag
ttagccacagatgaagagaagttcttgaatgtttgcagcagtcgagatctggagcagaac
ctgagcaacctgcagagagatctggacgagatattcaagacaaaagctctactagctgga
actaaagtggtgtacacccagttcatcagcgagctgagcgagcacagggagccctgctgc
cccgtgtgccgacgatcgtttccctcagagtctgaggtgcaggaagtcgtcagagtcttg
cagtctaaactacacctggtgccagaaaaactgaagatcactgagcaggacctggagagg
acggagaggaggagagaggagatagtggctctcaggcctgtgagggaggccattgtgcag
tttcaggaaaatgagctgccagcgttgaggaagcggctgcagactgtggacagagaagct
gagaggctgaagggtgatgtggaggagcaggaggctctgctcgccatcctgaggtctgag
gaggaaaaagccaaagactgcctgcagggcatttccctcatggactcatacctgagaaac
cttgaaggggtggaaaggaaaattgatcagcaggcatccaaactccaggaagtaaacctg
gacaacacatttcagcagctcagtcaggagaaacaagaaactcaggaccagctcgacacc
acttacagcacaattgtgcgtaaacataaacagatccaggaccagcaggagcagattcag
aggctgaaaagtgcagcgatagagatgagagacgagcagcttcagctgatcagagacaaa
cagaagcagcagcacctggaggagctgagtgcagagatcactgctaggatggaggcctta
accacagagatcagggagggaaatgaagaactgcgccctctatcagctgctctggagaag
ctgcagcaggaaaagcaaaagctggtggagcagaagaagcagagagaggaagaagagcag
aggaagattcgtaacattgaggagagactgaaggaaatcactgccttgcaaagagacgtc
actaaatatgttgatgagggaagagacaaatacaaagaggacaaagagtcagagtatcaa
gcagcaacgactcagctccaagaggctgagaggaataaagagaggatcagcacagagatg
ggaaacatccagcaggacaaagacactcaaaaggtcaaagagtgctgcttatgggacaac
ctgaccttgaggaagcgcgttaatgagctgaagaacatggcggccaaacatgaggctctg
caggaagaactgagctacatgcaagtctcgcagcttcagcgacaacgtgaggaagaggaa
agcaagctggccgaactgaagagtgagcgcagtcgggaggagggcgcacagaaacccctg
gaggagcagatactggaatacagcaaacagctggaggaagatcagtacggcaaagccgag
gagctccacagagacaaggtgattgagatgaggaccacacagctgctcagcaaagacctg
aaactctacgaagaggctctagatcaagccatcgtgaagttccacagcatgaagatggat
gagatcaaccagaacatcagagacctgtggcgcagcacctacaggggtcaagatatcgag
tacatcgagatcaggtctgaggtggaggagaggtcagaggggcggaggagctacaactac
agagtagtgatgatgaaaggagacgcagacgtgaatatgagagggcgctgcagtgccggt
cagaaggtgctggcatccctgatcatccggctcgctctggcagaggccttctgtctcgac
tgtggaatcctggccctggatgagcccaccaccaacctggaccgggagaacatcgagtcc
ctggcagacgctctcgtacagatcatcaggactcgctctcagcagcgtcacttccagctg
ctgatcatcactcatgacgaggactttgtgcagctgctggttcggtccgggtgcatccag
cacttctaccgcatcagcaagaaccaggaccagaactcagagatcaccaagcacagcaca
gccttcctctctgtgtga
DBGET
integrated database retrieval system