Oreochromis aureus (blue tilapia): 116325804
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Entry
116325804 CDS
T07295
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04110
Cell cycle
oau04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116325804 (smc1a)
04114 Oocyte meiosis
116325804 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116325804 (smc1a)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116325804 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
116325804 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116325804
NCBI-ProteinID:
XP_031602684
Ensembl:
ENSOABG00000011133
UniProt:
A0A668TAW0
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All DBs
Position
LG20:complement(20218882..20231601)
Genome browser
AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERAFTRVIIGSSSEYRINNKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIERLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMDELDKEMRAVELAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLDDYIATSRQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
ESSSQRTSSSVLAKEALIEIDYSILSEDLKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNNCFESVSTNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSMENFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaaactgatagagatcgaaaatttcaagtcgtataaaggaaggcagatt
atcggaccttttcacaagtttactgcaatcatcggacccaatggatctggaaagtccaac
cttatggatgccatcagcttcgtgttggcagagaagacaagtaacctgcgtgtgaagact
ctgaaggatctaatccatggagcgcctgtagggaagccagctgccaacagagcctttgtc
agtatggtgtaccaggaagataatggagaagaacgtgccttcacaagagtcattattggt
tcttcctccgagtatcgcatcaacaataaagtagtgggcctgcctgaatacagtgaagaa
ctggaaaaacttggaattctgataaaggctaggaacttcttggtctttcagggagctgtt
gagtctattgccatgaagaaccccaaagagcgtacagcgctgtttgaagagatctcccgt
tcaggagagctggcccaggagtatgaccggaggaagaaggagatggtgaaagcagaggag
gacacgcagttcaactatcatcgcaagaaaaacatcgctgcagagcgcaaagaggctaag
caagagaaagaagaggctgagcgttaccagcgtcttaaggatgaagtagccagagctagt
gtacagttgcagctcttcaaactttaccacaatgagactgagatcgagaggctgaacaaa
gagcttgggcagcggaacaaagagatcgataaggaccgtaaaaagatggaccatgtggag
gaggagctgaaggacaagaagaaggagctgggcaggctgatgagggagcaacagaccatt
gagaaagaaattaaggagaaggactctgagttgaaccaaaagaggcctcagtacatcaaa
gccaaagagaacacctcacacaaaatcaagaagcttgaggcagcaagaaaatcactgcaa
aatgcccagaagatgtacaagaagcggaaggcagacatggatgagctggacaaagagatg
agggcagtggagctggctaagcaagagtttgaggaaagaatggaggaggaggcgcagagc
caaggccaggatctcaccttggaggaaaatcaggtgaagcagtatcatcgtctgaaggag
gaggccagcaaacgtgctgccacgctggcacaggagctggagaagttcaaccgcgaccag
aaggctgaccaggaccgcctggacttagaggagagaaagaaagtggagacagaggccaaa
attaaacagaagatccgtgaaattgaggaaaaccagaaacgtattgaaaaactggatgat
tatattgccaccagcaggcaatcactagatgagcagaagcgtatggaggaagagctgact
gaggaagtggagatggccaaaaggaggattgatgagatcaatatggagcttaatcaggtg
atggagcagcttggagacgccagaatcgacaggcaggagaacagtcgccagcaacgtaag
gccgagatcatggagagtataaaaagactctatcctggctctgtgtatggtcgtctgatc
gacctgtgtcagcccactcagaagaaatatcaaatcgctgtgactaaagtgttgggtaag
aacatggacgccatcattgttgactcagagaagactggcagagactgtattcagtacata
aaggagcagagaggagagccggagaccttccttcctcttgattaccttgaagtgaaacca
accgatgagaaactccgagaactgcgaggagccaagctggtgattgatgtgattcgctat
gagcctccccacatcaaaaaagctctgcagtatgcttgtggcaatgctctggtctgcgag
aatgttgaggatgcacgaagaattgcgtttggagggccatacaggcacaagacggtagcc
ctggacggtactctgttccaaaagtctggagtcatctctggaggtgccagcgatttgaaa
gctaaggccagacgatgggatgagaaggcagtggacaagctcaaagagaaaaaggagaaa
ctcactgaagagctcaaggagcaaatgaaggccaagaggaaggaggcagagctgcgtcag
gtgcagtctcaggcccacggtctgcagatgagactcaagtactctcagagtgatctggag
cagacaaaaacccgtcacctctccctcaatatgcaggagaagtctaagctagagagtgaa
ttggcaaactttggccctcgcatcaatgacatcaagaggatcatccagtcccgtgagcgg
gaaatcaccgacttgcgagaccgcatgaacctggtggaggatgaggtgtttgtggaattc
tgtaaggagattggagtgaggaatatcagagagtttgaggaggaaaaagtgaaaaggcag
aatgagattgcaaagaagcgtcttgagtttgagactcaaaagacccgcctgggtatccag
gtggactatgagaagaatcagctgaaggaagaccaggagaaggtcatgatgtgggagcag
actgtgaagaaggacgaggctgaaatcgagagacttaaaaaggaggagcacagacacatg
aaaatcattgatgagacaatggcccagctgcaggacctgaagaaccagcatctcaccaag
aaatctgaagtcaatgataaaaatcacgagatggaggagatccgcaaaaaactgggtggt
gcaaacaaggagttgactcagctccagaaggaggtcactgccattgagaccaaactggag
cagaagcgcagtgaccgtcacaacctgctgcaagcctgcaaaatgcaggatatcaggttg
cctcttcgttctggaacaatggatgatatcagccagggagaggggagttcccagaccgat
gagtccagcagccaaaggacatccagcagtgttttggccaaagaggctcttatagaaatt
gactacagcatcctgtctgaagacctcaaggatgcactgtcagaggaagagatcaaggct
gagacgaacacactgcagcagcgtctgaatgagcagcagagcatcctgcagagaatcagt
gcacccaacatgaaggctatggagaagcttgagagtgtcagggacaaattccaagagacc
agtgatgagtttgaggctgctcggaaaagagccaagaaggccaagcaagcctttgagcag
atcaagaaggaaagatttgatcgctttaataactgttttgagtctgtctccaccaatatc
gatgagatctacaaggctctgtcacgcaacagtagtgctcaggcatttttaggtccagaa
aacccagaggaaccatatttggatggtatcaattataactgtgtggccccaggcaagagg
ttcagaccaatggacaacttgtcaggaggagagaaaactgttgccgccctggctctgctc
ttcgctattcacagctacaaacccgcccccttctttgtgctggatgagatcgacgcagct
ctggacaacactaatattggcaaggtggccaactacatcaaagaccagtcaatggagaac
ttccaggccattgtcatttctctgaaggaggaattctacaccaaggcagactctctcata
ggtgtttatccagagcaaggagactgcgtcataagcaaagtgctaacctttgacctctcg
caatatcctgatgccaacccaaatccaaatgagtaa
DBGET
integrated database retrieval system
