Oreochromis aureus (blue tilapia): 116325988
Help
Entry
116325988 CDS
T07295
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116325988 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116325988 (fip1l1b)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116325988 (fip1l1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
116325988
NCBI-ProteinID:
XP_031602930
Ensembl:
ENSOABG00000023404
UniProt:
A0A668VLW4
LinkDB
All DBs
Position
LG6
Genome browser
AA seq
556 aa
AA seq
DB search
MSAEEADKTATTDASAGDEEEEWLYGDESESKDEDEEAKLNAAVSAPADASTDDAAAHAT
GNGVASEATGEAAGEDVESDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAPPVNLNIKSTG
SRPYGQVSAKLKGVDLDAPGNINGVPVLEVDMESFEEKPWRKPGADLSDYFNYGFNEDTW
KAYCEKQKRLRMGLEVSTVGSVTSKITVQQGRTGNEKDIPSLPVHTSKPDFTSPVNLYKS
AVSQVTRISPPLWTGPPAQDMSYYTKSSGTIDVIGGQLAPISRVEGRRRHNLEGNNIQVI
SEHSTSEAEPAPAKIPAFFPPGPLPPNIPPPPFLPPPPNVSTAPPLIPPPRLPITVPPPS
FPPPTSGPPPSIIPTMDSSHPGGYDGRSVPPYPFPQGAYPPPMVGGVPPPWPPMIDNSKP
WDYYSRRDDKRDKDRERPRERTHEREREREHSPSAMSYTSDDERFRYREYQERGYAERHR
DRASREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKE
ASEEISGDQENQEAME
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaagcggacaaaacagccaccactgatgccagcgccggagacgaggag
gaggaatggctgtatggagatgagtcagagagcaaagacgaggatgaagaagccaagctg
aacgctgctgtcagtgcccctgctgatgcttcaacagatgatgctgctgcgcacgctaca
ggaaatggagttgcctctgaggccacaggtgaggctgcaggcgaggatgtggagagcgac
agcgacagtgacgatgacgacgatgatgtccgtgtcacgattggagacataaaaaccgga
gcgccacagtacacaacttatggagccccacctgtcaacctcaacatcaaatcaacaggc
tccagaccttatggacaagtttccgcaaagctgaagggagtggatctcgatgcacctgga
aacattaacggtgttccagtgctagaggtggacatggagtcttttgaagagaaaccatgg
aggaaaccaggagccgatctgtcagactacttcaactacggcttcaatgaagacacatgg
aaggcttactgtgaaaaacagaagaggctgcgtatgggcctcgaggtctctacagttggc
tcagtgacaagcaagatcactgttcagcagggcagaactggtaatgaaaaagacataccc
agtttgccagttcacacctcaaagccagacttcacatctcctgtcaacttgtacaagtct
gctgtcagtcaggtcaccaggatctctccccctctttggactggcccgcctgctcaggac
atgtcttattatacgaaatcgagcggcacaatcgatgtgattggtggacagttggcacct
atcagcagagttgagggtcgacgccgacataatctagagggcaacaatattcaggtaatc
tctgagcactcgacatcagaggctgagcctgctccggctaagattcccgcattcttccct
cctggaccacttcctccaaacattcccccaccgccatttctccctccgccaccaaacgtc
agtactgcacccccactcatccccccacccaggttgcccattactgtccctcctcctagt
tttcctccaccaactagtgggcctcctccttctatcatccccactatggacagcagccat
ccaggaggttatgatggacgctctgttcctccgtatccgtttcctcaaggtgcttaccct
ccccccatggttggaggtgtgcctcctccttggcctccgatgatagataactccaaacct
tgggattattattcccgccgagatgacaaaagagacaaggacagagaaagacccagagag
aggacacatgagcgggagcgagagagggagcacagcccttcagctatgagctataccagc
gacgacgagcggtttcggtaccgtgaatatcaagagcgtggttacgcagaacgccaccgt
gaccgtgcaagccgagagaaagaggaaagacacagagagaggcggcacagagagaaagaa
gaggggcgccacaagtcctcacgcagcagcagtagcaggaggaggcacgacagcgaggag
ggggacagccaccggcggcacaaacacaagaagagcaagaggagcaaggagggcaaagag
gccagcgaggagatcagcggagaccaagagaatcaggaagccatggagtag
DBGET
integrated database retrieval system
