Oreochromis aureus (blue tilapia): 116326065
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Entry
116326065 CDS
T07295
Symbol
aqr
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116326065 (aqr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116326065 (aqr)
Spliceosome [BR:
oau03041
]
Complex B
Other components
Prp19-related factors
116326065 (aqr)
Complex C
116326065 (aqr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
AAA_16
UvrD-helicase
UvrD_C_2
SLFN-g3_helicase
DEAD
AAA
Parvo_NS1
PhoH
AAA_22
LPD34
DnaB_C
nSTAND3
Raptor_N
Motif
Other DBs
NCBI-GeneID:
116326065
NCBI-ProteinID:
XP_031603027
Ensembl:
ENSOABG00000015974
LinkDB
All DBs
Position
LG19:complement(14633593..14680017)
Genome browser
AA seq
1472 aa
AA seq
DB search
MATMEKETPAKKAATPSVSQINAEYVTQLANKYWAPHAKNKLPFDPKVMEDVYEKEILNS
KFAIRKIMLLEFSQYLENYLWVNYTPEVSSNAYIMSICCIVNEKFRENVPAWEVFKKEPR
HFPFFFKCVMEAVLADEQAGLTLKEQTVLLVFMDHCFNSLEVDLIREQVQQLISLPMWMC
LLPSRLQHELKKVPKLQKFWNLIKKKFDKMDADAAEQAKKERTFLSALIKKFHGVLASIP
PTGPASMDQVHYSERFIELMIDLEALLPTRRWFNTVLDDSHLVVRCHLSSLTKREKEGHL
FCQLLDMLKFYTGFEINDQTGNALTQKEMTTLHYDRITSLQKAAFAHFPELHDFALSSVA
SVDTRESLTKHFGHLSPNMLHKVASYLCLLPELPEGQDTTIEKEVLLELLVSRHERRISQ
IEQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLES
TYEIRQDIEDVIWRMKPWQSEYGGVVFGGWARMAQPITSFSIVEVAKPNIGESWPARVRA
DVTINLNVQDHIKHEWEGLRKHDVCFLITVRPMLLYGTRFDRRQSFVDQTGLVYVRGCEV
QGMLDDKGRVIEEGPEPKPKLRGDVRTFRVWLDPNQYQQDMTSSIQSNTEDPYETFNIIM
RRKPKENNFKAVLETIRHLMNTECVVPDWLHDIILGYGDPGSAHYSKMPNQISTLDFNDT
FLSLDHLRSCFPGNTIKVTEENPELQVPPFRITFPTSNTADKGKKRKADEEVENKEEDKT
LIVEPYVTPNRGPYPYNQPKRNTIPFTSTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQI
ISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYG
RVNYVLARRLELLREVGRLQESLDVPGDVSYTCETAGHFYLYQVISRWEEYMSKVKPKQG
KNVEVEAVAAHFPFHKYFSNAPQPVFKGRSYEEDMDIAEGCYRHIKKIFTQLEEFRAFEL
LRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPL
LLQNPEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTIDLDAQ
GRARASLCNLYNWRYKHLGNLPHVQQLPEFQVPNPGLTFDFQLINVEDFNGVGESEPNPY
FYQNLAEAEYCVALYMYMRLLGYPAERISILTTYNGQKHLIRDVINQRCAGNPVFGQPHK
ITTVDRFQGQQNDYIILSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFEL
TPAFNQLTARPLQLHIRPHEYYNQEQPRDTSGQPDQIVKNMPEMANLVYNMYMHMIQTSQ
QYRQQQQQELALPPKQTQKDAGALSTTATSKEPQEETPMEQENPEGTASTEPNSEDAGEK
EGNKDTDGHAKMPEHPGRDSDSDGESADEQEQ
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaagaaacccctgctaaaaaggctgctactccgtctgtatcccag
ataaatgcggaatatgtcacgcagttggctaacaaatattgggcgcctcatgcaaagaat
aaactaccttttgaccctaaggtgatggaagatgtttacgagaaggagattctcaactcc
aaatttgccattaggaaaattatgctgcttgaattcagccaatatcttgaaaactacctg
tgggtgaactacactccagaggtttccagcaatgcctacatcatgtccatttgttgcatt
gtcaatgagaagttcagagaaaatgttccagcctgggaggtgttcaagaaggaaccacgc
cattttccatttttcttcaaatgtgtgatggaagccgttctggcagatgagcaggctggt
cttactctgaaggaacaaactgtgcttctggtctttatggaccactgtttcaacagtctg
gaggtagatttgatcagagagcaggtgcagcagctcatctctctgccaatgtggatgtgc
ctcttaccatccagactccagcacgagctgaagaaagttccaaagctgcagaagttctgg
aatctaatcaaaaagaaatttgataagatggatgctgacgcagctgagcaggcaaagaag
gagaggaccttcctctcggctcttattaaaaagtttcacggagttcttgcgtcaattcca
ccaacagggcctgcatccatggaccaagtgcattactccgagagattcatagaactcatg
attgatttggaggcactgctgcccaccaggcgttggttcaatacagtgctggatgactct
catttggtggtcagatgtcacctctccagcctcacaaaaagagagaaggaggggcatctc
ttctgtcagttgctggacatgctgaagttctacactggttttgaaatcaatgatcagaca
ggaaatgcactgactcagaaagagatgaccactttgcactatgacagaatcacctcactg
cagaaggcagcctttgctcatttcccagagttgcacgactttgctttatccagtgtcgca
tcagtagacacccgagaatccttgaccaaacactttgggcatctcagtcccaatatgctc
cacaaggtggcctcttatttgtgcctgctgcctgaactgcctgaagggcaagacaccact
attgagaaagaggttctgcttgagttgctggtgtctcgtcatgagcgcagaatctctcag
attgagcaacttaaccagatgcccctttatccaacggagaagataatctgggatgagaac
attgtgccaacagagtattactcaggagaaggttgtctggctctaccaaagcttaatctc
cagttcctgacactccacgactacctgttgaggaactttaacctctttcgtctggagtcc
acctatgagatcagacaggacatagaagatgtgatttggcgcatgaaaccatggcagtca
gagtatggtggagtggtgtttggagggtgggcgaggatggctcagcctatcacctcgttt
tccatagttgaggttgccaagcccaacatcggagagagctggcctgctcgtgttcgcgca
gatgtgactatcaacctcaatgtacaagaccatatcaagcatgagtgggaaggtctgcgg
aaacatgatgtttgctttctgatcacggtacgccccatgctgctctacggcacacgtttt
gaccggcgtcagtcatttgtggatcagactggccttgtgtatgtgagaggctgtgaggtg
cagggtatgctggatgacaaggggcgtgtcattgaggaaggtcccgaaccaaagcctaag
ctgcgtggagatgtcagaacatttcgtgtatggcttgacccaaaccagtaccagcaggac
atgaccagcagtattcagagtaacaccgaagacccatatgagactttcaacatcatcatg
aggcgcaaacctaaggaaaacaatttcaaggctgtgctagagaccatcagacatctgatg
aacacagaatgtgtcgtcccagactggcttcatgacatcatcttaggttacggtgacccg
ggcagcgcacattattcaaaaatgcccaatcagatctcaacgttggacttcaacgacacc
tttttgtcattggaccacttgcgttcatgtttccctggtaacaccataaaggtcactgag
gagaaccctgaacttcaggttcccccattcagaatcacatttcccacctcaaacacagca
gacaaaggaaagaaaagaaaggctgatgaagaagtggaaaacaaagaggaagacaagacc
ttgattgtcgaaccttatgttacccccaatcgtgggccatatccctacaatcagcccaaa
cggaacacaattccattcacttctactcaaattgaagccattcgagccgggatgcagcca
ggtctaacaatggttgtgggaccaccaggtactggaaagaccgatgttgccgttcagatc
atctcaaacctgtatcacaacttccctgagcagaggaccctcatagtcacacattcaaat
caggctttgaaccaactctttgaaaagatcatggctctagacatcgacgagcgccacctt
ctgcgtctgggccatggagaggaagagctggagactgagaaagacttcagcagatatgga
agggtaaactacgtcctggcaagaagactggagcttctccgagaggtgggaaggttacag
gagagcttggatgtcccaggagatgtttcttatacctgtgagactgctggacatttctac
ctctaccaggtgatatcccgctgggaagagtacatgagcaaagtaaaaccaaaacagggc
aagaacgtggaggtggaggctgttgctgcacattttcctttccacaaatacttttccaat
gcaccccagcctgtgttcaaaggtcggtcatatgaggaggacatggacatcgcagagggc
tgctatcgccacatcaagaaaatatttacccagctggaggaattcagggcctttgagctg
ctgagaagtggactggatcgctccaaatatctgctagtgaaagaagccaaaatcattgcc
atgacctgcacacacgctgcactcaaacgtcacgacctagtggagctgggatttaagtat
gacaacatcctgatggaagaagctgcacagattctggaaattgagactttcatccctcta
ttgctacagaacccagaggatggctacagcaggctaaagcgttggatcatgattggcgac
caccaccagttgcccccagtcatcaagaacatggctttccagaagtactccaacatggag
cagtctctcttcacccgatttgtgcgcctaggggtgcctacaatagatttggatgcacag
ggccgtgcacgtgcaagcctgtgcaatttgtacaactggcgctacaaacacctggggaac
ctgcctcacgttcagcaacttcccgagtttcaggtgcccaaccccggcctgacgtttgat
ttccagctaattaatgtggaagacttcaatggggtgggggaatctgagcccaacccttac
ttttatcagaacctggcagaggcagagtactgtgtggctctatacatgtacatgcgtctg
ttgggctacccagctgagcgtatcagcatcctcaccacctacaacggacaaaaacacctg
atcagagatgtcatcaaccaacgctgtgctggaaatccagtgtttggtcagccccacaag
attacgacagtggacaggttccagggtcagcagaacgactacatcatcctctccctggtc
cgcaccaaagctgtgggacacctgagggatgtgaggcgtctggtggtagccatgtcaaga
gccagactgggcctgtacatttttgcccgagtgtcactgtttcagaactgcttcgaattg
actcctgccttcaaccagctcactgccagaccactgcagctacacattagaccacacgag
tactacaaccaggaacagcctcgagatacttctggacagcctgaccaaattgtgaagaac
atgccggaaatggccaacctggtgtataatatgtacatgcacatgatccagacctcccag
cagtacagacagcagcaacagcaagaactggctctgcctccaaaacagacccaaaaagat
gctggcgctttgtcgaccactgctacgtctaaggagccacaggaggaaacccccatggag
caggaaaacccagaaggaacggcgagcacagagccaaactcggaggacgccggcgagaag
gaaggaaacaaggatactgacggccatgctaagatgccagagcatcctggtagagacagc
gacagcgatggagaaagcgcagatgagcaagaacagtag
DBGET
integrated database retrieval system
