Oreochromis aureus (blue tilapia): 116326202
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Entry
116326202 CDS
T07295
Symbol
blm
Name
(RefSeq) Bloom syndrome protein homolog isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03440
Homologous recombination
oau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116326202 (blm)
03460 Fanconi anemia pathway
116326202 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oau03032
]
116326202 (blm)
03400 DNA repair and recombination proteins [BR:
oau03400
]
116326202 (blm)
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116326202 (blm)
DNA replication proteins [BR:
oau03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116326202 (blm)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
116326202 (blm)
Bloom's syndrome complex (BTR)
116326202 (blm)
FA (Fanconi anemia) pathway
116326202 (blm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
Helicase_C
RecQ_Zn_bind
HRDC
RQC
DUF1178
Motif
Other DBs
NCBI-GeneID:
116326202
NCBI-ProteinID:
XP_031603235
Ensembl:
ENSOABG00000014189
LinkDB
All DBs
Position
LG7:12305783..12315446
Genome browser
AA seq
1407 aa
AA seq
DB search
MSSLPQNNLKEQLARHSNAAQSKQSVAKPKPGAFSFKKKSSSGTTKVEVPTKVISSNALA
NRNVNVPKSSLVTKSPLTFSNKLERPQKSKINNYFSVSSKCKPDAISPADIASPASQTPS
VVSDIKSAPAPAKSNSQSCSSNSFNSTALDVSRSFPMDNWDDLDDFETPAKGKNNSFSSE
VSEKSSKLLPSPTGEKAESTGKLNYDSLFKTSKLTSKNGKQTCMETDEPEENVNTTAVSP
GPSLNQEPADWSDEEELAMKMNRKHPAHLKHIMSDSEEDNNAELEPFKGGTGNKEIWIDP
KTIEIDDNSEPEDNLDCIPPSPIPDEITYTGSTLETRAKTADAEIGDNAVKSKSPVTLHE
PSELCLKDKTNEKLFAIMESICALVDSIPEHELIALSCGDELLLKRAQRKRILATGGDCL
FRMQQPDSTVISEPSFKETSFSSNGVSSNSSVPVDSKKPPQHRRSSVISVDYDSDDSDSV
IDLKPLDNKDSRAIGVETDSICDSPSAHRLTKPSFNISEKSSIDLDGSDLFFSPKESESG
VQKKSNNTPTFVAAEDEEMDDFYNDDFDIDDFNDSDIPDYFDEPQTSSAVTTAVKEGGPS
KSSWEKKPTTPTSAPKPSTICSPEPTFKNPAHDRFRGFNFPHSQEMMKIFHKRFGLHQFR
FNQLEAINAALLGEDAFVLMPTGGGKSLCYQLPACVSLGVTVVVSPLKSLIVDQVQKLTT
LDIPATSLSGDKSDSEASRIYMQLSRKDPIIKLLYVTPEKVSASNRLISALQNLYERGLL
ARFIIDEAHCVSQWGHDFRPDYKKLHELRQKFPNVAMMALTATATPRVQKDILNQLNMSR
PQVFTMSFNRTNLKYAVLPKKPKKVDEDCTSWIKKHYPRDSGIVYCLSRNDCDAMAESLQ
RAGLSALSYHAGLSDSDREYVQSKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKS
MEGYYQESGRAGRDGEISHCILFYSYTDVQRIKRIISMDREGDRHTKATHYNNLHSMVHF
CENVMECRRIQLLAYFGELKFNRNFCKDHPDVSCDNCTKPNQYKMRNVTEDVKKIVRFVQ
ENCEKVGARFGKTANQNRLTLNMLVDIFIGSKAAKVQTGMFGIGAAYSRHNADRLFKKLV
LDNVLVEDLYITNGGQAVSYVSAGTKAMNVLSGHMQVEFYETESASTIRKHKAGTAKNIS
RREEMVQECLKELLDLCKQLGKAFGLHYYNIFSTATLKKIAEKLSSDPEVLLQIDGVTED
KLDKYGAEVIQVLQKYSEWQLPEEQADSGGDGWIDTARGHTRGNDEDDTESSTYFRNKSA
QGQKRKKAPFFKYSKKKKGCGNTSSSSKGRGYSSNKSWSSSSSRGGGRGSRSLAGDASAT
RRPGLLAAPMPQSSQRPFLKPVFSHFS
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtctaccacaaaataacttgaaggaacagctagcgaggcacagcaatgctgct
caaagcaagcagtctgttgctaaacctaaaccgggggctttttctttcaaaaagaagtcc
tcatcaggtacgaccaaggtggaagtccctaccaaggtaatcagctcaaatgctttggca
aacaggaatgtcaatgtccccaagagcagtttggtgactaaatctcctttgacattttca
aacaagcttgagagacctcaaaaatccaaaatcaacaactacttctctgtaagttcaaaa
tgcaagccggatgccatcagcccagcagatattgcctctcctgcatcccaaacaccttca
gtggtctctgatattaagtcggcaccagctccagctaaatctaacagccagtcttgtagc
agtaattcattcaattccacagctctggatgtgtcacgtagttttcctatggacaactgg
gatgatttagatgactttgaaacaccagccaagggaaaaaacaactcattcagttcagaa
gtatcagagaaaagcagcaaactactgccatcccctactggagaaaaagcagaatcgaca
gggaaattgaactatgattccttatttaaaacatccaaattaactagcaagaatggtaaa
caaacctgcatggaaacagatgagccggaggaaaatgtcaacaccactgcagtttcacca
ggacccagtttgaaccaggaaccagcagactggtcagatgaggaggaacttgccatgaag
atgaacagaaaacatcctgcacatctaaagcatatcatgagtgacagtgaagaagataat
aatgctgagctggaaccttttaaaggaggcacaggtaacaaggaaatatggattgaccca
aagacaatagagatagatgacaactcggagcctgaagacaacctcgactgcattccacct
tcacccatccctgatgagatcacttacacaggctcaacactggagacaagagctaaaaca
gctgatgctgaaattggagataatgctgtgaaatcaaagagccccgtcacactgcatgaa
ccatctgagctctgcttaaaagacaaaacaaatgaaaaactttttgctatcatggagtcc
atttgtgctctggttgactccatccctgaacatgaattaattgctttgtcctgtggagat
gaacttttactgaagagggcccagaggaagagaattcttgcaactggcggtgactgtttg
tttaggatgcagcagccagacagcacagtgatttctgaacccagcttcaaagaaacctcc
ttttcaagcaacggtgtttcatccaacagctctgtgcctgtggactccaagaagcctcct
cagcatagaagatcttcagtcatctctgtggactatgactctgatgactctgacagtgtt
attgatttaaagcccttggataataaggacagcagggcaataggtgttgaaactgacagt
atctgtgactctccatcagcacacaggctcacaaagccatcttttaatatatctgagaaa
tcgagcattgatcttgatggctcagacctcttcttctcacccaaggagtcagagagtggt
gtgcagaagaaatcgaacaacaccccaacgtttgtagctgctgaagatgaagaaatggat
gacttctacaatgacgactttgatatagacgactttaatgactctgatatcccagattac
tttgacgaaccacaaacttcatcagctgtgactacagcagtgaaagagggggggccgagc
aagtcctcatgggagaagaaaccaacaacacctacttctgctccaaagccgtcaacgatt
tgttctccagaacccacattcaaaaacccagctcatgatcgcttcagaggcttcaacttc
cctcattcacaagagatgatgaagatctttcacaagcgttttggacttcatcagttcagg
tttaatcaactagaagcgattaatgctgcactactgggtgaagatgcgtttgttttaatg
cccacaggtggagggaaaagcttgtgctatcagctgcctgcctgcgtctcgctgggggtc
actgtggtggtttctccactcaaatcactcatcgtagaccaggtgcagaaactcaccact
ctggatattccagcaacaagtctatctggtgataaaagtgatagtgaagcatcgaggatt
tatatgcagctttcaaggaaagatcccattatcaaactgctctatgtcacacctgaaaag
gtgagtgcgagtaacaggttaatctccgcactgcagaacttgtacgagcgaggccttctg
gctcggtttatcatagatgaagcccattgtgtcagtcagtggggccacgatttccgccca
gactacaagaagctgcatgaactgcgtcagaagttccccaatgtggcaatgatggctctg
acagccacggctacgccacgagtgcagaaagacatcctcaaccagctgaacatgagtcga
ccccaagtgtttacaatgagcttcaacagaacaaacctgaagtacgcggtgctgcccaag
aaacccaaaaaggtggatgaggactgcaccagctggatcaagaagcactatccacgtgac
tctggcatcgtgtactgcttgtctcgtaacgactgtgatgccatggctgagagtcttcag
agagcagggttatcagccctgtcatatcacgcaggactcagtgacagtgaccgagagtat
gtgcagagcaaatggatcaatcaggatggttgccaggtcatctgtgccaccatagccttt
ggcatgggcattgacaagcctgatgtgcgctatgtgatccacgctagtctgcctaaatcg
atggaaggatactaccaggagtcagggagagctggcagggatggagagatctctcactgc
attctcttttactcctacaccgacgtccagcgcatcaagaggattatcagcatggacaga
gaaggcgacagacacaccaaggcaactcactacaacaacctacacagcatggtgcacttc
tgcgagaacgtgatggagtgcagaagaattcagctgcttgcgtacttcggagagctgaag
ttcaacagaaacttttgtaaggaccatccagacgtcagctgcgacaactgtaccaaaccc
aaccaatacaagatgcgaaacgtgactgaagatgtgaaaaagatcgtgaggtttgtccag
gagaactgtgagaaagtcggagcaaggtttggcaagactgctaaccaaaacagactgacc
ctcaacatgcttgtggatatcttcataggctctaaagctgccaaggtacagacaggaatg
tttggcattggagcagcctactccagacacaatgctgaccgtctttttaaaaagctggtt
ctggataacgtcctggttgaagacctctacatcaccaatggtgggcaagctgtgtcttat
gtctccgctggaacaaaagccatgaatgtgctgtctggacacatgcaggtggagttttat
gagaccgagagcgcgtccaccatcaggaaacataaagctggcacggcgaagaacatctcc
cggagagaggagatggtgcaggagtgtcttaaggagctgttggatctctgcaagcagcta
gggaaagcgtttggccttcattattacaacattttctccactgccacattgaaaaagatc
gctgaaaagctttcttctgaccctgaagtcctcctgcaaattgatggtgtaacagaagat
aaactggacaagtatggagctgaagtcattcaggtcctacagaaatattctgagtggcag
ctacctgaggagcaggctgacagtgggggcgacgggtggatagacacggcacgaggtcac
actcgtggaaatgacgaggacgacacagagtcctccacctacttccgtaataagtctgca
cagggacagaagagaaagaaggctccgttctttaagtattccaagaagaaaaaaggatgt
ggcaacacaagctccagttctaaaggccgtggctacagcagcaataaatcctggtcgtcc
tccagctccaggggtggaggtcgagggtccaggagcttagcaggtgatgcatcagcaacc
aggagaccaggattactggcagccccgatgcctcaaagcagccagcgtccgtttttaaag
ccagtattttcacactttagctag
DBGET
integrated database retrieval system
