Oreochromis aureus (blue tilapia): 116326220 Help Entry 116326220         CDS       T07295                                  Symbol ighmbp2 Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism oau  Oreochromis aureus (blue tilapia) Brite KEGG Orthology (KO) [BR:oau00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:oau03009]     116326220 (ighmbp2)    03012 Translation factors [BR:oau03012]     116326220 (ighmbp2) Enzymes [BR:oau01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      116326220 (ighmbp2)     5.6.2.5  RNA 5'-3' helicase      116326220 (ighmbp2) Ribosome biogenesis [BR:oau03009]  Eukaryotic type   Other ribosome biogenesis factors    116326220 (ighmbp2) Translation factors [BR:oau03012]  Eukaryotic type   Initiation factors    Initiation associated factors     116326220 (ighmbp2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_30 AAA_19 zf-AN1 DEAD Viral_helicase1 ResIII AAA_16 nSTAND3 Helicase_RecD IstB_IS21 AAA_22 UvrD-helicase Flavi_DEAD SLFN-g3_helicase PhoH DnaB_C ABC_tran AAA_25 AAA NPHP3_N ATPase AAA_31 Zot HEM4 Motif Other DBs NCBI-GeneID:  116326220 NCBI-ProteinID:  XP_031603263 Ensembl:  ENSOABG00000015487 LinkDB All DBs Position LG7:complement(14123018..14130274) Genome browser AA seq 983 aa AA seqDB search MALEKFVSKTLELLQEEREAEIEETRVWQENISLKDLQNKGVCLLKLQIGSQSTGLYGRT VVILEPRKHLGFSSLPSNSFGPGDIVGLYDTTGCAAASQISTGIVTRVGQASISVAFDDL KDGHSFDSDALYNLLKLANDVTYKRMKRALNTLNGYNNGPASNLISVLFGDTKPTSQSQP NKVEFFNSNLDDSQREAVSFALSQRELAVIHGPPGTGKTTTVVEIILQAVKHGQKVLCCA PSNVAVDNLVERLAQCKAKVLRLGHPARLLESIQKHSLDAILAQSDNANIIAEIRKDIDK AFTGMKKEKGERGNLKREIGELRKELKNRETAAIAQILKSADVVLSTNTGACDDGPLKFL PAEHFDWVVIDECAQALESSCWIALLRARKCILAGDYKQLPPTIKSQMAASKGLSLSLME RLIQMYGDSVVRMLTVQYRMNSAIMQWASKEMYQGRLTAHSSVEGHLLKDLAGVACVEET STPLLLIDTAGCGLSEMEVADEQSKGNTGEVDIVDLHIKALTEAGVKAKDIAVIAPYNLQ VDLLRQKLSAKHPELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTRA RRHIAVVCDTQTVQNHGFLKSLIDHMTEFGEVRTAFEYIQDIVPQNYTRDHKDAKTASSS TSTSTKHKVKDQPSSKAKPGQKKSAGSSSKENASGSEKQAKSSTSAEQEQSKGRRAEIRE QVERFMKNLNQSELQFPSSFNSHDRLLVHEIAEELGLIHESKGEGSERCITVSRPPVSKP AKEEARAATEEEEETVPDSKSEPSSQPPLDLKSLHLERMKREQQKREENAQQKKQQNNIH PPQGHSSKKAKGKNRTKAGACDIAAASAPDDDFDTLISSVMKADSVCSFVKCKASVLTLG QLCLFCNRQYCLSHHIPEVHGCGDKAKSHARMRISKEGILYAGSGKKDKSMDPNKKAYLQ RKLDSKLKDMASQRKPKNKEKDG NT seq 2952 nt NT seq  +upstreamnt  +downstreamnt atggccttggaaaagtttgtgtccaagacactcgagcttctgcaggaggagcgggaggct gagatagaggagaccagggtatggcaggagaacatttctctcaaggatcttcaaaacaaa ggtgtttgcctgctgaaactgcaaataggaagtcagtccacaggcctctatggccgcaca gtcgtcatcttggagccaagaaagcatcttgggttctcatctctgccgagcaacagcttc gggcctggtgatatagttggcttgtatgacactactggatgcgctgcagcctcacagatc agtactgggattgtcacaagggtcggccaagcatctataagcgtggcctttgatgattta aaggatggccatagttttgattcagatgcactgtacaaccttttgaagttagcaaacgat gtcacctacaaacgaatgaaacgtgctttgaatacattaaatggatacaacaatggacca gcttccaatttaataagtgttctctttggagacacaaaacctacttctcagtcacaacca aataaggttgaattctttaactcaaacttggatgactcccaaagagaagctgtatccttc gctctgtcacagagagagctggcagtgattcatgggcctccgggcactgggaagaccacc actgtggtggagatcatcctccaagctgtcaaacatgggcaaaaggtcctgtgctgtgct ccttcaaatgtggcggtggataatttagtggagaggttagcccagtgcaaagccaaggtc ctgaggctgggtcacccagccaggctactggagtccatacagaaacattcactggatgcc atcctggctcagagtgacaacgcaaacatcatcgctgagatccggaaggacattgataaa gcatttacgggaatgaagaaggagaaaggagaacgggggaacttgaaacgagaaatagga gagctgagaaaagagctgaaaaacagagagacagcagccatcgcccagatccttaaaagt gctgacgttgtgttatcaaccaacacaggtgcctgcgatgacgggcctctgaagttcctg ccagctgaacattttgactgggtggtgatagatgagtgtgctcaggcactggagagcagc tgctggatcgccctgcttagagcgcgcaagtgcatcctggcaggagactacaagcagtta ccacctacaattaaatcacaaatggctgcatcaaaaggcttatctctgagtcttatggag agacttatccagatgtacggggactcggtggttcgtatgctgacagttcagtaccgcatg aacagtgccattatgcagtgggcctccaaggagatgtaccagggaagactgaccgctcac agctccgtggagggacatttactgaaagatctagcaggagtcgcatgcgttgaagagacc agcacgccgctgcttcttattgacacagcggggtgtggtctgagtgaaatggaggtcgca gatgagcagtccaaaggcaacacaggtgaggtcgacatcgtcgatctgcacataaaagct ctgactgaagcaggagttaaagctaaagacatagctgttattgctccatacaatctacaa gtcgatcttctacgtcagaaactttctgcaaagcatccagagctcgagataaaatcagtg gatggatttcagggcagggaaaaagaggctgtcgtgttgtcgttagttcgatccaacaga aaaggtgaagttggatttctagcagaggacagaaggataaatgttgccgttacacgtgca agacgacacatcgctgtcgtgtgtgacactcaaaccgttcagaatcacggttttctgaaa tccctgatcgatcacatgactgagtttggtgaggtcagaacagcgttcgagtacattcaa gacatcgtaccacaaaactacacccgtgaccacaaagatgcgaaaactgcttcttccagc acgtccacatctaccaaacacaaggtcaaggatcagccctccagtaaagcaaagccagga cagaaaaaatctgctggtagcagcagcaaggaaaatgcaagtggttcagagaagcaagca aagtctagcacatcagcagagcaagagcagagtaagggcagacgtgctgagatcagagag caggtggaaaggtttatgaagaacttaaaccagagtgagctacagtttccatcatcattt aactcacatgaccggctgctggtccatgagatcgctgaggagctgggcctcattcatgag agcaaaggggagggaagtgaaaggtgtatcactgtctccagaccgccagtgtcaaaacca gccaaagaagaagcacgagcagcaacggaagaggaagaggaaacggtcccagattcaaaa agtgagccatcgtctcaaccccccttagacctgaaaagtttacatttagagaggatgaag agggagcagcagaaaagggaagaaaacgctcaacaaaaaaagcagcagaacaacattcat ccacctcaaggccactcatcaaaaaaagcaaaaggtaaaaatcgaaccaaggcaggggcc tgcgacatcgctgctgcctctgctccagatgacgacttcgacacactcatcagtagtgtc atgaaggccgacagtgtttgtagttttgtcaagtgcaaagcatctgtgctaacactcggg cagctctgcctgttctgcaacaggcagtattgtctcagtcatcatataccagaggtgcat ggctgtggagataaagccaagtctcatgctcgaatgaggataagtaaagagggcattctt tatgctgggagtgggaagaaagacaaatctatggaccccaataagaaggcctatctgcaa agaaaattggattctaagctaaaagacatggcgtcacagaggaagccaaaaaacaaagag aaggatggttaa

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