Oreochromis aureus (blue tilapia): 116326393
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Entry
116326393 CDS
T07295
Symbol
zgc:113307
Name
(RefSeq) lumican
KO
K08121
fibromodulin
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116326393 (zgc:113307)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oau00535
]
116326393 (zgc:113307)
Proteoglycans [BR:
oau00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
116326393 (zgc:113307)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRR_6
LRR_5
LRRNT
Motif
Other DBs
NCBI-GeneID:
116326393
NCBI-ProteinID:
XP_031603501
Ensembl:
ENSOABG00000022778
UniProt:
A0A668VKL5
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Position
LG5:complement(16422498..16437913)
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AA seq
368 aa
AA seq
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MSMALLCSGLLFLLSGFQSASATFVADMDYGGIPLWINRLLGEPSVLSLQGRMDPAWFRA
NNPQPCPEECDCPIQWPTALYCDQRALAHIPDSLPDRTQYLFLQGNNISTLSSSVLANVT
GLRWLILDNNQLESDKLKQDSLQSQTQLWYFFANHNHLSSVPSALPAGLKQLRLAYNQIS
SISPEAFQNMHSLALLLLQGNRLNTITEGDLRGLVSLNLLDLSGNSFSTIPRHLPSSVEQ
LYLSNNSLTGLDEDSFEGFLNLKYLRLSHCGLQNRGVHSQVFNHSSLVELDLSYNKLTAI
PTVPTTLQYLYLEANKIQEFNVTSFCREVGPQSYSKMKFLRLDGNKISYHQLPPDWVFCL
RVLQRIYI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggctcttttgtgctctggcctcctgtttctgctgagtggttttcagtctgct
tcagccacatttgtagctgatatggactatggaggcattcctctgtggattaaccgcctg
ctaggcgagcccagtgtgttgagtctgcaggggcgaatggatccagcctggttccgcgct
aataatccgcagccctgccctgaagagtgtgactgccccatccagtggcccacagcactc
tactgtgaccagagagccttggcacacatccctgacagcctgccggacagaactcaatac
ctgtttctacagggcaacaacatctcaaccctgtcctcctctgtgctggccaacgttacc
gggcttcgatggctcattctggacaacaaccaactggagagcgacaagctgaagcaggac
tctttgcagagccagacccagctgtggtacttctttgctaaccacaaccacctgagttca
gtgcccagtgctttaccagctggactcaaacagctgcgactggcctacaaccaaatcagc
agcatcagcccagaagctttccagaacatgcatagcctggcattgctgctgctgcaggga
aacagactgaataccatcacagagggagacctcagaggtctggtcagtctgaacctgttg
gacctcagcgggaattcattttcaaccattcccaggcacttaccttcctccgttgagcag
ctctatctgtcaaacaactctctcactggactggatgaggacagttttgagggatttctc
aaccttaagtatctacgcctaagtcactgtggcctgcagaaccgtggggtccactcgcag
gtctttaaccactccagcttggtggagctggacctttcatataataaactcactgctatt
cccacagtccccaccaccctccagtacctctacctggaggccaataaaatacaagagttc
aatgtgaccagtttctgcagagaggtgggacctcagtcttactccaagatgaagtttcta
cgattggatggaaacaaaatatcctaccatcagctgcctcccgactgggtgttctgcctg
cgagtccttcaacgtatttacatctga
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integrated database retrieval system
