Oreochromis aureus (blue tilapia): 116326687
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Entry
116326687 CDS
T07295
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04142
Lysosome
oau04144
Endocytosis
oau05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116326687 (cltca)
04142 Lysosome
116326687 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116326687 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116326687 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oau04147
]
116326687 (cltca)
Membrane trafficking [BR:
oau04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116326687 (cltca)
Exosome [BR:
oau04147
]
Exosomal proteins
Proteins found in most exosomes
116326687 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
116326687
NCBI-ProteinID:
XP_031603927
UniProt:
A0A668TZR7
LinkDB
All DBs
Position
LG10:1911313..1943802
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQTQVVIIDLADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVERKVSQPIEGHAASFAQFKIEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKHNVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLTG
AEELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQALTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDPELWASV
LLETNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGQEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
TKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLSWFLQ
ENKKECFAACLFTCYDLLRPDVVLETSWRHNIMDFSMPYFIQVMREYLSKVDKLETSESL
RKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAGYGQPAAQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccaaaacttagggatc
aatccggccaacataggcttcagcaccctaaccatggagtctgataagttcatctgtgtg
cgtgagaaggtgggtgagcagactcaggtggtgatcatcgacttggccgaccccaacaca
cctatccgcaggcccatctcagctgacagcgccatcatgaatccagccagcaaggtcatt
gcacttaaagacgctgccaaaactcttcagatctttaacattgagatgaagagcaagatg
aaggcgcacaccatgaccgacgatgttaccttttggaagtggatctctcttaacacagtt
gcacttgtgactgacaatgccgtctaccattggagcatggagggtgactcacagcctgtg
aaagtctttgaccggcactctagcctggcaggctgccagatcatcaactaccgcactgat
gccaagcagaagtggctcctgctcatcggcatctcagctcagcaaaatcgagtggtggga
gccatgcagctgtactctgttgagagaaaagtttctcagcccattgaaggccatgctgcc
agcttcgcccagtttaagatagaaggaaatgcagaagagtcaactctgttctgctttgct
gtcagaggccaggctggagggaagttgcacatcattgaagtgggaaccccaccaactggt
aaccagccatttcctaagaaagcagtggatgtcttcttccctccagaagcccagaatgac
ttccctgtagccatgcagataagctccaagcacaatgtggttttcctcattaccaaatat
ggctacatccatctctatgacttggagactgggacctgcatctacatgaaccgcatcagt
ggagagaccatctttgtcactgctccacatgaggccacctcaggcatcattggggtcaac
aggaaggggcaggttctgtctgtctgtgtagaagaggaaaacatcattccctacatcacc
aacgtgctgcagaatccagatctggctctccgcttagctgtccgcaacaacctcacggga
gccgaagagctgtttgcgcgcaagttcaacaacctgtttgctgctggcaactactccgag
gccgccaaggttgctgctaatgcaccaaagggcatcctgcgcaccccagataccatccgt
cgtttccagagtgttcccactcagccaggccagacctcccccttgctgcagtactttggt
atcctgttagaccagggtcagctcaataagtttgagtccctggagctttgcaggcctgtc
ctccagcaggggcgaaagcagcttttggaaaagtggctgaaggaagacaagttggagtgt
tcggaagaactgggtgacttggtgaaggcggtggatcctaccttggctctcagtgtgtac
ctgagggccaacgttcccaacaaggtcattcagtgctttgcagagactggtcagtttcct
aagattgtcctgtacgccaaaaaggtcggctacacaccagactggatctttctgctcagg
aatgtgatgcggatcaatccagaacagggcctgcagtttgcacagatgctagtccaagat
gaagagccactggctgacattacacagattgtggatgtgtttatggagtacaacctgatt
cagcagtgcacatcattccttctggatgcactgaaaaacaacagaccctcagaaggacct
ctccagactcgtctgctggagatgaacctcatgcatgcaccacaggttgctgatgcaatc
ctgggcaaccagatgttcaccaactatgatcgtgcccacattgcccagctgtgtgagaaa
gctggactcctgcaaagagcactggagcactacactgacctgtatgacatcaagcgtgct
gtggtgcacacacacctgctcaacccagagtggttggtgaactactttggctcattgtca
gtggaagattctctggagtgcctcagggccatgctctcagctaacatccgccagaacctg
cagatctgtgtccaggtggcgtccaagtaccatgaacagctcaccacacaggctctcact
gaactctttgagtccttcaagagctttgaaggtttgttctatttcctgggctctattgta
aacttcagtcaggatcctgaagttcacttcaaatacatccaagctgcctgcaagacgggc
cagatcaaagaggtggaaaggatctgtagagagagcaactgctacgatcctgagcgtgtc
aagaacttcctcaaggaagccaaactaaccgaccagctcccactcatcatcgtctgtgac
cgttttgactttgtccatgacctggtcctctacctgtaccgcaacaacctgcagaaatac
attgagatctatgttcagaaggtaaatccgagccgtctgcctgtggtggtcggtggcctc
ttagatgtggactgctctgaggatgtcatcaagagtctgatcctggttgtcagaggacag
ttttccacagatgaactggtcgctgaggtggaaaagaggaacaggctgaagctgctcctg
ccctggctcgagtctcgtatccacgaaggctgtgaagagccagcaacccacaatgcactg
gccaagatctacattgacagcaacaacaaccctgaacgcttcctgagggaaaacccttac
tatgacagccgtgtggtgggaaagtactgtgagaagagagacccccatttggcatgtgta
gcttatgagagaggacagtgtgaccaggagctgatcaatgtctgcaatgagaactccctc
ttcaaaagcttgtctcgctaccttgtacgacgcagagaccctgagctgtgggccagcgtg
ctgctggagaccaatccctacaggcgaccacttattgatcaggtggtgcagacagcgctg
tcagaaacccaggacccagaggaggtttcggtcacagtcaaggctttcatgactgccgac
ttgcccaacgagctcattgagctgctggagaagattgtgttggataactcagtcttcagt
gaacacagaaatctgcagaacctgctgatcttgacagccatcaaggctgaccgtactcga
gtgatggaatatatcagcaggctagacaactatgatgcccctgacattgcaaacattgcc
atcagcaatgagctctttgaggaggcctttgcaatctttaaaaagtttgatgtcaacacc
tctgctgtgcaggtgctgatagagcatattggcaacttggaccgagcctatgagtttgca
gagcgctgcaatgagcccgctgtgtggagccagctggccaaggctcagctgcagaagggc
cttgttaaggaagccattgattcctacatcaaagctgatgacccctctgcatacatggag
gtggtacaggctgctgataagagtggtaactgggaggacttggtcaaattcctgcagatg
gctcgtaagaaggcccgcgaatcctacgtagagaccgagctgatctttgctttggccaaa
accaatcgccttgctgaacttgaggagttcatcaatggacccaataatgctcacatccaa
caggttggtgaccgctgctatgatgagaaaatgtatgaggccgctaaactgttgtacaac
aacgtttccaactttggtcgtctggcttcaaccttggtgcacctcggagagtaccaggct
gctgtggacggcgcccgtaaggccaacagcacccgcacctggaaagaggtgtgcttcgcc
tgtgtggatggacaggagttcagactggctcagatgtgtgggctccatatcgtagtgcac
gccgatgagctggaggagctgattaactactaccaagaccgtggttactttgaggagttg
attaccatgctggaggccgccctgggcctggagcgcgctcacatggggatgttcacagag
ctggccatcctctattccaagttcaagccccaaaagatgagagagcacctggagctcttc
tggtcaagagttaacatcccaaaggtcctgagagcagcagagcaggctcacctgtgggcc
gaacttgtcttcctgtatgacaaatacgaggagtacgacaacgccatcatcaccatgatg
aaccacccgacagatgcctggaaggagggccagttcaaagacatcatcaccaaggtggcc
aacgtggagctgtattacaaagccatccagttctatctggagttcaaaccattgttactg
aacgatttgctcatagtgctttcccccagactggaccactcacgtgcggtcaacttcttc
accaaggtgaaacagctgcctctggtcaaaccgtacctacggtcagtacagaaccacaac
aacaaatcagtcaacgaagcacttaacaacctcttcatcacagaggaggactatcaggca
ctgagaacatcaatagatgcctacgataactttgacaacatctcactggcccagcgcttg
gagaagcacgagctgattgagttcaggagaatcgctgcctacctgtttaagggcaacaac
cgctggaaacagagcgtagagctctgcaaaaaggacaagctttataaggatgccatgcag
tatgcttcagaatccaaagatacagagctggcagaagagctgctgtcctggttcctgcag
gagaacaagaaggagtgttttgccgcctgcctgttcacttgctacgatctgctacgacct
gatgtggtgctggagacctcctggaggcacaacatcatggacttttctatgccatacttc
attcaggtcatgagggagtacctcagcaaggtagataaacttgaaacctcagagtctcta
aggaaagaggaggagcaggcaacagagacgcaacccatcgtctacggaacaccccagctg
atgctgacagcaggcccaagcgtacctgtggcccctcagcaagcgtatggctacggctac
caggcgcccgcaggatacggtcaaccagcagctcagccaggcttcggctatggcatgtaa
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integrated database retrieval system
