Oreochromis aureus (blue tilapia): 116326885
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Entry
116326885 CDS
T07295
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116326885 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116326885 (smarca4a)
03036 Chromosome and associated proteins [BR:
oau03036
]
116326885 (smarca4a)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116326885 (smarca4a)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116326885 (smarca4a)
Chromatin remodeling factors
BAF complex
116326885 (smarca4a)
PBAF complex
116326885 (smarca4a)
GBAF(ncBAF) complex
116326885 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
116326885
NCBI-ProteinID:
XP_031604180
Ensembl:
ENSOABG00000020185
UniProt:
A0A668V2Q3
LinkDB
All DBs
Position
LG4:complement(28623642..28639834)
Genome browser
AA seq
1628 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGMMGPSPGPSPGSAHSMMGPSPGPPGSGHPHPPQG
PSGYPQDNMHQMHKPMEAMHEKGMPDDPRYGQMKGLGMRPGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPGGPPVPGAGPMEGSGDSNQGMGQPNRGGPQGPGG
PPVAAGGAGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPEHLQMAVQGKRPMPGMQQQPM
PNMPPSTGPGGGPGAGPGPAPANYNRQHGMVGPNIAPPGPAGVPPGMQGQPTNGPPKSWP
EGPMVNAAAPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPPMMLH
QKQNRITPIQKPRGLDPVEILQEREYRLQARISHRIQELENLPGSLAGDLRTKATIELKA
LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER
KRRQKHQEYLNSILQHAKDFKEYHRSITAKIQKATKAVATYHANTEREQKKENERIEKER
MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAAQALKEKKKKKKK
KKKPEAPEGAAPALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGVEAPKAGQLEAWLEM
NPGYEVAPRSDSEGSGSEEEEEEEEEDDAQPQTSSAATEEKKKIPDPDSEDVSEVDVLHI
IEHAKQDVDDEYGNASFNRGLQSYYAVAHAVTEKVDKQSSLLVNGQLKQYQIKGLEWLVS
LYNNNLNGILADEMGLGKTIQTIALITYLMEYKRINGPFLIIVPLSTLSNWVYEFDKWAP
SVVKVSYKGSPAARRSFVPILRSGKFNVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRMK
NHHCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPF
AMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVL
YRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPFMFQHIEESFSEHLGYSG
GIITGPDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLD
GTTKAEDRGMLLKTFNDPASEYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQ
DRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGYERRAFL
QAILEHEEQDEEEDEVPDDETVNQMIARSEEEFEQFMRMDLDRRREEARNPKRKPRLMEE
DDLPGWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGNLEDI
EEEVRHKKTTRKRKRDRDHDGGPATPSSSSGRGRDKDEDGKKAKKRGRPPAEKLSPNPPS
LTKKMKKIVDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHK
YRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDESEGEESEEE
EEEVDEGSESECRSVKVKIKLGRKEKGERGGKGQRRRGRGARAKPVVSDDDSEEEQEEER
SASGSEED
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgacccccctatgggagggacacctcgccctggtccctccccaggccca
gggccatctccaggaggcatgatggggccaagtccaggtccctcaccaggctcggcccac
agcatgatggggcctagcccaggacctccaggatctggacacccccatcctccacaggga
ccctcaggatatcctcaggacaacatgcaccagatgcataaaccaatggaagccatgcat
gagaagggaatgcccgacgaccctcgctatggccagatgaagggcttgggcatgagacca
gggggacacagtgggatgggaccccctccgagcccaatggaccaacattcccaaggttac
ccctctccattaggaggctcggagcacgcacctagtcccgtcccagccaacggccctcct
tctggtcccatgatgcctggaggcccacctgtcccgggagcaggccctatggagggcagt
ggagactcaaatcagggtatgggtcaaccgaatcgtggtggtccccaagggccagggggg
ccccctgttgcagcaggtggtgcaggtggacccactcccttcaaccagaaccagctacac
caactcagggcacagattatggcctacaagatgctggcacgcagtcagcctctaccagag
cacctgcagatggctgtgcagggaaagaggcccatgccagggatgcagcaacagccaatg
cctaatatgccaccttctacagggcctggaggtggcccgggtgctgggccgggaccagct
ccagcaaattacaatagacaacatggtatggtaggtcccaatatagctcctcctggacct
gcaggagttcctccaggtatgcaaggccagcctactaatggacctcccaaatcatggcct
gaaggaccaatggtgaacgctgctgccccttccaaccctccccagaagttaattccaccc
caacccacaggccgaccttctcctgctcctccctcagtgcctccagcagcctcccctgtt
atgccccctcagacacagtcgccaggacagcctgcacagccccctcccatgatgctacac
cagaagcagaatcgcataacccccatccaaaaacctcgtgggctcgatccggtggagatc
ctccaggagagagagtacaggcttcaggctcgtatttctcaccgtatacaggagcttgag
aacctgcctggctctctagctggtgatctacgcaccaaagccaccatcgagctcaaggcc
ctcaggctgcttaacttccagagacagctgcgccaggaggttgttgtttgcatgcgtcgt
gacactgctttggaaactgcccttaatgctaaggcctacaaacgcagcaaacggcagtct
ctacgtgaggctcgtatcactgagaagctggagaaacagcagaagattgaacaagagcgc
aaacggcgccagaaacaccaggaatacctcaacagcatcctgcagcatgccaaggacttt
aaggagtatcaccgctccatcacagcaaagatccagaaggccaccaaagctgtcgccacc
tatcatgccaacactgagcgcgagcagaagaaagagaatgaacgcattgagaaggagaga
atgcggaggctgatggctgaagatgaagaaggttatcgtaaacttatcgaccagaagaaa
gacaagcgtctggcgtacctgctacagcagacagacgagtacgtggccaacctcactgag
ttggtgcgcgcgcacaaggctgcacaagcactcaaagagaagaaaaagaagaagaagaaa
aagaagaagcccgaggctccggagggagctgctcctgctctgggacctgacggagagcct
ttagatgagactagtcaaatgagtgacctaccagtcaaggtcatccatgtagacagtgga
aagatcctgaccggtgtggaagcacccaaggctgggcagctggaagcctggcttgaaatg
aacccaggatacgaagtagcgccacgctccgacagtgaaggcagcggttcagaggaggaa
gaggaggaggaggaggaggacgacgcccagcctcagacgtcttcagctgcaacagaagag
aagaagaagatccccgaccccgacagtgaagatgtatcagaagtggatgtcctgcacatc
atcgaacacgccaagcaggatgtagacgacgagtacggcaatgcaagtttcaaccgcggc
ttgcagtcctactatgcagtggctcatgctgtcactgagaaagtggataaacagtcctca
ctgctggtcaatgggcagctcaagcaataccagatcaaaggtctggagtggctggtgtca
ctttacaacaacaacttgaatggcatcctggctgatgagatgggtctaggcaaaacgatc
cagaccatcgccctcatcacttacctcatggagtacaagcgcatcaatgggcccttcctc
atcatcgtacctctctcaactttatcaaactgggtgtatgagtttgataagtgggcaccg
tctgttgtgaaggtttcctacaaggggtctccagctgctcgacgttcattcgttccaatt
ttacgtagcggaaagttcaacgtgctgctgaccacatatgagtacattattaaggataag
caggtgttagcaaagatccgctggaagtacatgattgtggatgaaggccatcgtatgaag
aaccatcactgtaagctgacccaagtcttgaacacacactacttggcgccacgacgtttg
ctgctcacaggaactccgctgcagaacaagctccccgagctctgggccctgctcaatttc
ctgctgcccacgatcttcaagagctgcagcaccttcgaacagtggttcaacgccccgttc
gccatgactggagagaaggttgacctaaatgaagaagagaccatcctgatcattcgacgt
ttacacaaggtgctccgacctttcttgctgcggcgactcaagaaagaagtcgaggcgcag
ctgccagagaaggtggagtatgtcataaagtgcgacatgtcagctctgcagagggttctg
tacagacacatgcaggccaagggagtcttgctcacagacggttcagaaaaagacaagaag
ggtaaaggtggcacgaagaccctgatgaacactatcatgcagctgaggaagatttgcaat
caccccttcatgttccagcacattgaggagtccttctcggagcatctcggttattctggt
ggaatcatcacaggccctgacctgtatcgtgcctctggaaagtttgagctgctggatcgt
atcttgcccaagctgagggccaccaaccacaaagtgctgctcttctgtcaaatgacctca
ctcatgaccatcatggaggactattttgcgtaccgcaatttcaagtacctgcgtctggat
ggtaccaccaaagcagaggatcgtggcatgctgctgaagacgttcaacgaccccgcctct
gagtactttgtgttcttgctcagcaccagggctggaggtctgggcctgaacctgcaatct
gctgatactgtcatcatttttgacagtgactggaacccgcaccaggacttgcaggcccag
gatagagcccaccgtatcggtcagcaaaacgaggtgcgcgtgctgcgcctctgcaccgtc
aacagcgtggaggaaaagatcctggcagcagccaagtacaagctgaacgtggaccagaag
gtcatccaggccggcatgttcgaccagaagtcttcaggctatgaacgtcgggccttctta
caggctattctggagcacgaggagcaggacgaggaggaagacgaagtgcctgatgatgag
accgtcaatcagatgatcgccaggagcgaagaggagtttgaacagttcatgcgtatggat
ctagacagacgccgcgaggaggcccgtaaccctaagaggaaaccccgtctgatggaggag
gacgacctgcccggctggattttgaaagatgacgctgaggttgagaggctaacctgcgag
gaggaggaggagaagatgtttggcagagggtctcgccagcgcaaggaggtggactacagc
gactcgctcacagagaagcagtggctcaaggccatagaagaaggcaatctagaggacatt
gaagaggaagtgcgtcacaagaagacgaccagaaagcgcaagagagaccgtgaccacgac
ggcggcccggccacacccagctccagcagcggccgcgggcgggacaaggacgaggatgga
aagaaagcaaagaaacggggtcgcccacctgctgagaagctctctccgaaccctccatct
ctcactaagaagatgaagaagattgttgatgctgtcatcaaatacaaggacggcaatggc
cgacaactgagcgaagtcttcatccagctcccctctcgcaaagagctgcctgagtattac
gagctcatccgcaaaccggtggacttcagaaagatcaaggagcggatccgcagccacaaa
taccgcagcctgaacgacctggagaaggatgtgatgctgctgtgtcagaacgcgcagact
ttcaacctggagggctctttgatctacgaggactccattgtgctccagtccgtcttcacc
agcgtgagacagaagatcgagaaggaggatgaaagcgagggagaagaaagcgaggaggaa
gaggaggaggtagatgaaggctcggagtctgaatgtcgttcagtgaaggtgaagattaaa
ctgggccggaaagagaagggggagagaggagggaaaggacaacggcggcggggccgcgga
gcccgggctaaacctgtggtaagcgacgacgacagcgaggaggaacaggaagaggagcgt
tcagccagtggcagcgaggaagactga
DBGET
integrated database retrieval system
