Oreochromis aureus (blue tilapia): 116327015
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Entry
116327015 CDS
T07295
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oau03037
]
116327015 (ift52)
Cilium and associated proteins [BR:
oau03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
116327015 (ift52)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF2194
DUF4159
Motif
Other DBs
NCBI-GeneID:
116327015
NCBI-ProteinID:
XP_031604330
Ensembl:
ENSOABG00000001022
LinkDB
All DBs
Position
LG5:7484354..7489065
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AA seq
434 aa
AA seq
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MEKEQYNSVVFNASKRELFTTNNGYKSMQKRLKAQWKIQSIKEELSLDKLKSVKLWITAG
PRERFTASEMEALKVYLDGGGNILVMLGEGGEMKYDTNINFLLEDFGVMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGIIEDENVGNNAQALTFVYPYGATLTVMKPA
VAVLSTGSVCFPLNRPVLAFYQGKNSGKLAVLGSCHMFSDQYIDKEENNKIMDVVLQWLM
TNNIQLNQIDAEDPEITDYTMLPDTGCLSEQLRVCLQEGDENPRDFTSLFDMSLFNLSTD
TLPQVISAYKQLNVKAEPLQLIAPQFETPLPQLQPAVFPPALNDLPPPMLDLFDLDETFS
SEKVRLAQLTNKCTDDDLEFYVRKCGEILGVTPKLDKEQRDAKHILEHIFFQVVEFKKLN
QEHDMDPEARFTPL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaacagtacaacagcgtggtcttcaatgcttcaaaaagagagctttttact
acgaacaatggctacaaatccatgcagaagagactaaaagctcagtggaaaatccaaagc
ataaaagaagagctgtcattggataagctgaagagtgtcaagttgtggataactgcaggt
ccaagggagaggttcacagcgtcagagatggaggcgctgaaagtctacctggatggagga
gggaatatcttggtcatgctcggtgaaggaggagaaatgaagtatgacacaaacatcaat
ttcctcctggaggacttcggagtaatggtcaacaatgatgctgtggtgaggaatgtgtac
tacaaatacttccatcctaaggaggcgcttgtgtcgaatggtgtactgaacagggagatc
agtcgtgctgctggaaaagtggtcacgggaatcattgaagatgaaaatgttggaaacaat
gcacaggcgctcacatttgtgtacccgtacggtgccacactgaccgtgatgaagccggcc
gtggctgttctttcaacgggctccgtctgctttcccctcaacaggcctgtcctggctttc
tatcagggcaagaattctggcaaactggctgtcttgggttcctgccacatgttcagtgat
caatacatagacaaagaggagaacaataaaatcatggacgttgtgcttcagtggctcatg
accaataacattcagctgaatcagattgatgccgaagacccagagatcacagattacaca
atgctgccagacactggctgtttgtctgaacagctcagagtgtgcttacaagaaggagac
gaaaacccacgggacttcacctctctctttgatatgtctttgttcaatctgtcgactgac
accttaccccaagtcatcagtgcttacaagcagcttaatgtgaaagctgagccactgcag
ctgattgcaccgcagtttgaaactcctctgcctcagcttcagcctgctgtctttccacct
gccttaaatgatttgcctccacccatgctggacctgttcgatctagacgaaacattctcg
tcggagaaagtgcgactggcacagctcaccaataagtgtacagacgatgaccttgaattc
tacgtccggaaatgtggtgaaattctcggagtgactcctaagttggataaagagcagagg
gatgccaagcacatcttggaacacattttcttccaggttgtagagttcaagaaactaaat
caggaacacgatatggatcctgaggcccggttcactccgctgtga
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