Oreochromis aureus (blue tilapia): 116327047
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Entry
116327047 CDS
T07295
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oau03009
]
116327047 (shq1)
Ribosome biogenesis [BR:
oau03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
116327047 (shq1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
DivIC
DUF1635
DUF4692
Motif
Other DBs
NCBI-GeneID:
116327047
NCBI-ProteinID:
XP_031604375
Ensembl:
ENSOABG00000009500
LinkDB
All DBs
Position
LG5:8743076..8787459
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AA seq
602 aa
AA seq
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MITPAFDLSQEPDYLILSIRVPYTRTSDFDLYIDGTDLKFFAKPYFLRLTLPGRIIEDGR
EKAKFDIDKGLFTLWVPKETPGEHFEGLQMLTSLLAPKGSRSAKPLVEEVSTECSERVGD
NEDEDEEDFDWQVEQEIYTEKSEEELSALQKYGFGNQRCGVFARLQKELSDVIDIKNPEG
TSAAERRQARQEAEASAFSADHYLADLFEDGEIKGLLKFRPWWTKLSPSSEQEGESAVPF
TDDEKEQLRKFTNRSYLLDKASRYQAWLSLVDILLAYTYEVRSTEGEYNVETPWTIRKLS
GTLCWLETYSSLQEVLVSFGRRVLCYPLYRHFSLVSLAIHDTAKILHSGKACVLKCLLDI
HKVFRENEPAYILNDLYITDYCIWIQRVKSKKVADLAATLEKATLQKNDLELEIDELEDA
ARIVAVEEEQQASKRAPVSSDDSSSSSDSSSTSSDSSSESSSESEESEAEEDCTESKEGG
GGGEMFKDNPPEPQPSSSVSPTPQAPTSFSAEKRREDALHSASEGSRQLIQVLGERVAEE
LRISPDSSHKGARQPSSAATETEGTSGRSSGGTLLEPSPRRNPLLIVQTQEDPDDLEGDS
IS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgataacgcctgcgtttgacctgagccaagagcctgactacctgatcctcagcatccgt
gtgccctacaccagaacgtcagactttgacctttacattgatggaacagatttaaagttt
tttgcaaagccctactttctgaggctaactcttcctggaagaattatagaggatggaagg
gaaaaggcaaagtttgacatagataaaggtcttttcactctttgggtccctaaggagaca
ccgggagagcacttcgaaggtcttcagatgctaacaagtctcctcgccccaaagggctcc
cgttcagcaaaaccactggtggaagaagtgagtactgagtgcagcgaaagggtgggagat
aatgaagacgaagatgaagaagactttgattggcaggttgagcaggagatttacacagag
aagtctgaggaagagctgagtgccctgcagaaatacggctttggcaatcagaggtgtgga
gtatttgcccgactgcagaaagagctcagtgacgtgatcgacatcaagaacccagaagga
acatcagcagcagagaggaggcaggcacgacaggaggcagaagcatcagccttctctgct
gaccattacctggctgatttgtttgaggatggtgagataaaggggctgctgaagtttagg
ccatggtggacaaaactgagcccttcttcagagcaggagggcgaatctgctgtaccgttc
actgatgatgagaaagagcagctgaggaaattcaccaaccgctcctacctgctggacaag
gcgtctcgttaccaagcgtggctaagccttgtggacatcctgctggcttacacctacgaa
gtgcgctcgacggagggggaatacaatgtggaaacaccgtggactatcagaaaactcagt
gggactctgtgctggctggagacgtacagctccctgcaagaggtcctggtgtcatttgga
cggagggttttgtgctatccgctctacagacacttttctttggtctctcttgctattcat
gacacggctaaaattctgcattcagggaaagcctgcgtcctcaaatgcctgctggatatt
cataaagtcttcagagagaacgagccggcatacatattgaacgatctgtacatcacagac
tactgcatctggatccagagagtcaagtccaagaaggtggcagacttagcagcaacgttg
gaaaaagcaaccctgcaaaaaaacgacttggagctggaaatcgacgagttagaggacgcg
gcgaggatcgtggcggtcgaagaggagcagcaagcttccaagagggctcccgtatccagc
gacgacagcagcagctcttctgacagcagcagcacttccagtgacagcagcagcgagtcg
tctagtgagagcgaggaatctgaggctgaagaagactgcactgaatccaaggagggagga
ggaggaggagagatgttcaaggacaaccctccagaaccccaaccctcctcctccgtttct
cccaccccccaggcacccacgagcttttcagcagaaaaaaggagagaggatgcccttcac
tcagcctcagaaggctccagacagctgattcaggtgctgggggaacgagtggcggaggag
ctgagaatctctccagactccagccacaaaggagcgagacagccgagcagcgctgcgaca
gagactgaaggcacgtctgggaggagcagcggcgggactttgttagagccgagtcctcgt
agaaaccctctgcttattgtccaaacacaggaagatcccgatgatcttgaaggggactct
atcagctga
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