KEGG   Oreochromis aureus (blue tilapia): 116327105
Entry
116327105         CDS       T07295                                 
Symbol
cdh4
Name
(RefSeq) cadherin-4
  KO
K06797  cadherin 4, type 1, R-cadherin
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:oau00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116327105 (cdh4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oau04515]
    116327105 (cdh4)
Cell adhesion molecules [BR:oau04515]
 Cadherins
  Major cadherins
   116327105 (cdh4)
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro Cadherin_4 Stevor DUF5527
Other DBs
NCBI-GeneID: 116327105
NCBI-ProteinID: XP_039467801
Ensembl: ENSOABG00000019003
LinkDB
Position
LG5:10686178..10893726
AA seq 928 aa
MNAGCVILACTLLVGASSGSKAGQPLKPPCRPGFSQNFYTVIVSRDVLHGQSILKDTTLS
SERVKFEDCQRNREVGFVSSDPNFSVRPDGTVYAEQEVANLSEPVQFMVTARGLHDPHIW
ETTVKLALAGHPHPLPFTKIGIEEMLSRVWDSPPRVIKFLRKHQRGSSANGLRRQKRDWV
IPPINVPENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPSGIYNIDPISGNMFVT
QPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSKP
GSSVMQVTATDSDDSTTANGMVRYRILSQSPHSPIPNMFTINSETGDIVTVAAGLDREKV
SQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSGEVPENKVNVVVTN
LTVVDRDQPHSPNWNAVYRIVSGDPSGHFTIRTNPITNEGMLTVVKPVDFEFNRAFMLTV
VVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKVIRFEEGVPAGTTLTVFAAQ
DPDHFIHQTVRYSKLSDPANWLKINRTNGQITTMALLDRESIYVKNNVYEATFLAFDNGK
SGSPQASGTGTLQINLIDVNDNAPVLIPREAQVCERARPNSRINITASDADAEPNIGPFV
FELPSFPASVRRNWTISRLNGDYAQLRLRIPYLEASVYEIPIIVSDSGNPPLSNRSVIRV
KVCPCDDNGDCSATGAVAAAGLGTGAIIAILICIIILLSMVLLFVVWMKRREKERQAKPL
LIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIINKPTGVRRVDERPVIAES
QYPVRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTSS
GDQDYDYLNDWGPRFKKLADLYGGGDDD
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgaacgctggctgcgtcatcttggcgtgcaccttacttgtgggcgcatcctcggggagt
aaggcaggccagcccctcaaacccccgtgcagaccaggcttctcccagaacttctacacg
gtgattgtctcaagagacgtactgcacggccagagcattcttaaagataccaccctgtcc
agtgaacgtgtgaagtttgaggactgccagcgcaacagagaggtcggcttcgtcagcagc
gaccccaactttagcgtgcggcccgatgggactgtgtatgccgagcaggaggtggccaac
ctgtcagagcctgtccagttcatggtaacagcccgggggctccatgacccacacatctgg
gagaccactgttaaactggccctggctggacatccgcatcctttgccattcacaaagatt
ggcattgaggaaatgctgtcaagagtctgggactcaccacccagggttatcaagttcctt
cgaaaacatcagcgaggctcctctgccaacgggctgaggcgacagaagcgagactgggtc
atcccgcctattaatgtgcctgaaaactccagaggacctttccctcatatgcttgtcaga
atccgctcggatcaggataaggatgtcggcatccgctacagcatcaccggagcaggcgct
gatcagcccccgagtggtatctacaacatagatcccatcagcggcaacatgtttgtcacc
caacctctggacagagaggaaagagcctccttccatctgcgtgcacatgcagtggacatg
aacgggaaccaggtggagaatccgatcgacctgtacatctatgtgatcgacatgaatgac
aacagacccgagtttcaaaaccaggtgtataacggctctgtggcagaaggatccaaacca
ggctcgtctgtgatgcaggttaccgccacagactcggacgactccaccacagcgaacggc
atggtgcgctaccgcatcctttcccagagcccccacagccccatccccaacatgttcacc
atcaacagtgagactggagacatagttacggtggcagccggcctggacagagagaaagtc
tctcagtacaccattattgtccaggccactgacatggagggcaacctgaattttggactc
tccaacacagccaccgccctcatctctattacagacatcaacgacaacccgcctgaactg
acagtgaggacgttttccggggaggttccggagaacaaagtaaacgtggtggtgaccaac
ctgacagtggtggaccgggatcagccccacagtcccaactggaacgcagtctatcgcatt
gtcagcggagacccatctggacacttcaccatccgcaccaatcccatcacaaacgagggc
atgctgaccgtggtcaagcccgtggattttgagtttaatcgtgccttcatgctaactgtg
gtggtgtccaaccaggcccacttggccagtggcatccagtcctcgcttcagtccacagca
ggcgtaaccatctctgtgcaggatgtgaatgagccgcctgtcttccccgtcaacccaaaa
gtgattcgctttgaagaaggtgtgccagcagggaccactcttaccgtgtttgcggctcaa
gacccggaccactttattcaccagactgtcaggtactctaagttatcagatccagcgaac
tggctgaagattaacaggaccaatggtcagatcaccaccatggccctgctcgaccgggag
tccatatatgtcaagaacaatgtgtacgaggcaacattcctggcattcgacaatggtaag
tctggttcgcctcaagccagcgggacaggaaccctccagatcaacttgatcgacgtaaac
gacaacgcgcccgtgctgataccccgggaggcgcaagtgtgcgaacgagcacgccccaac
tctaggatcaacatcacagcttccgatgctgatgccgaacccaacatagggccgtttgtc
ttcgagctgccttcttttcctgcaagcgttcgacgaaactggaccatttccagactgaac
ggtgactatgctcagctaaggcttaggattccctacctggaagcaagtgtgtacgagatt
cccatcattgtgtcagactcgggaaaccctccactgtccaaccgctctgtaatcagggtc
aaagtgtgtccgtgtgatgataacggggactgtagtgcaacgggagccgtggcagctgct
ggccttggcactggggccatcattgccatacttatctgcatcatcatactactcagcatg
gttctgctgtttgtggtctggatgaagcgcagggaaaaggagcggcaagcgaagcccctg
ctgattgaccctgaggatgacgtcagggacaacatcctcaagtatgatgaagagggagga
ggagaggaggaccaggactacgacttgagccagctgcagcagccggagtctctggaccac
atcatcaacaagccgacaggggtgcgcagggtggatgagaggcctgtgattgctgagtcg
cagtaccctgtcagacccagcttgccccaccctggagacataggcgacttcataaatgat
ggtctgagggcagcagacaacgaccccaccgctcctccctacgactccctgctggtgttt
gactacgagggcagcggttccaccgccggttctgtcagctcgctcaactccaccagctca
ggggaccaggactacgactacctcaacgactggggcccccgctttaagaagctggctgac
ctctacggaggaggggacgatgactga

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