Oreochromis aureus (blue tilapia): 116327105
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Entry
116327105 CDS
T07295
Symbol
cdh4
Name
(RefSeq) cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116327105 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oau04515
]
116327105 (cdh4)
Cell adhesion molecules [BR:
oau04515
]
Cadherins
Major cadherins
116327105 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
116327105
NCBI-ProteinID:
XP_039467801
Ensembl:
ENSOABG00000019003
LinkDB
All DBs
Position
LG5:10686178..10893726
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AA seq
928 aa
AA seq
DB search
MNAGCVILACTLLVGASSGSKAGQPLKPPCRPGFSQNFYTVIVSRDVLHGQSILKDTTLS
SERVKFEDCQRNREVGFVSSDPNFSVRPDGTVYAEQEVANLSEPVQFMVTARGLHDPHIW
ETTVKLALAGHPHPLPFTKIGIEEMLSRVWDSPPRVIKFLRKHQRGSSANGLRRQKRDWV
IPPINVPENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPSGIYNIDPISGNMFVT
QPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSKP
GSSVMQVTATDSDDSTTANGMVRYRILSQSPHSPIPNMFTINSETGDIVTVAAGLDREKV
SQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSGEVPENKVNVVVTN
LTVVDRDQPHSPNWNAVYRIVSGDPSGHFTIRTNPITNEGMLTVVKPVDFEFNRAFMLTV
VVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKVIRFEEGVPAGTTLTVFAAQ
DPDHFIHQTVRYSKLSDPANWLKINRTNGQITTMALLDRESIYVKNNVYEATFLAFDNGK
SGSPQASGTGTLQINLIDVNDNAPVLIPREAQVCERARPNSRINITASDADAEPNIGPFV
FELPSFPASVRRNWTISRLNGDYAQLRLRIPYLEASVYEIPIIVSDSGNPPLSNRSVIRV
KVCPCDDNGDCSATGAVAAAGLGTGAIIAILICIIILLSMVLLFVVWMKRREKERQAKPL
LIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIINKPTGVRRVDERPVIAES
QYPVRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTSS
GDQDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctggctgcgtcatcttggcgtgcaccttacttgtgggcgcatcctcggggagt
aaggcaggccagcccctcaaacccccgtgcagaccaggcttctcccagaacttctacacg
gtgattgtctcaagagacgtactgcacggccagagcattcttaaagataccaccctgtcc
agtgaacgtgtgaagtttgaggactgccagcgcaacagagaggtcggcttcgtcagcagc
gaccccaactttagcgtgcggcccgatgggactgtgtatgccgagcaggaggtggccaac
ctgtcagagcctgtccagttcatggtaacagcccgggggctccatgacccacacatctgg
gagaccactgttaaactggccctggctggacatccgcatcctttgccattcacaaagatt
ggcattgaggaaatgctgtcaagagtctgggactcaccacccagggttatcaagttcctt
cgaaaacatcagcgaggctcctctgccaacgggctgaggcgacagaagcgagactgggtc
atcccgcctattaatgtgcctgaaaactccagaggacctttccctcatatgcttgtcaga
atccgctcggatcaggataaggatgtcggcatccgctacagcatcaccggagcaggcgct
gatcagcccccgagtggtatctacaacatagatcccatcagcggcaacatgtttgtcacc
caacctctggacagagaggaaagagcctccttccatctgcgtgcacatgcagtggacatg
aacgggaaccaggtggagaatccgatcgacctgtacatctatgtgatcgacatgaatgac
aacagacccgagtttcaaaaccaggtgtataacggctctgtggcagaaggatccaaacca
ggctcgtctgtgatgcaggttaccgccacagactcggacgactccaccacagcgaacggc
atggtgcgctaccgcatcctttcccagagcccccacagccccatccccaacatgttcacc
atcaacagtgagactggagacatagttacggtggcagccggcctggacagagagaaagtc
tctcagtacaccattattgtccaggccactgacatggagggcaacctgaattttggactc
tccaacacagccaccgccctcatctctattacagacatcaacgacaacccgcctgaactg
acagtgaggacgttttccggggaggttccggagaacaaagtaaacgtggtggtgaccaac
ctgacagtggtggaccgggatcagccccacagtcccaactggaacgcagtctatcgcatt
gtcagcggagacccatctggacacttcaccatccgcaccaatcccatcacaaacgagggc
atgctgaccgtggtcaagcccgtggattttgagtttaatcgtgccttcatgctaactgtg
gtggtgtccaaccaggcccacttggccagtggcatccagtcctcgcttcagtccacagca
ggcgtaaccatctctgtgcaggatgtgaatgagccgcctgtcttccccgtcaacccaaaa
gtgattcgctttgaagaaggtgtgccagcagggaccactcttaccgtgtttgcggctcaa
gacccggaccactttattcaccagactgtcaggtactctaagttatcagatccagcgaac
tggctgaagattaacaggaccaatggtcagatcaccaccatggccctgctcgaccgggag
tccatatatgtcaagaacaatgtgtacgaggcaacattcctggcattcgacaatggtaag
tctggttcgcctcaagccagcgggacaggaaccctccagatcaacttgatcgacgtaaac
gacaacgcgcccgtgctgataccccgggaggcgcaagtgtgcgaacgagcacgccccaac
tctaggatcaacatcacagcttccgatgctgatgccgaacccaacatagggccgtttgtc
ttcgagctgccttcttttcctgcaagcgttcgacgaaactggaccatttccagactgaac
ggtgactatgctcagctaaggcttaggattccctacctggaagcaagtgtgtacgagatt
cccatcattgtgtcagactcgggaaaccctccactgtccaaccgctctgtaatcagggtc
aaagtgtgtccgtgtgatgataacggggactgtagtgcaacgggagccgtggcagctgct
ggccttggcactggggccatcattgccatacttatctgcatcatcatactactcagcatg
gttctgctgtttgtggtctggatgaagcgcagggaaaaggagcggcaagcgaagcccctg
ctgattgaccctgaggatgacgtcagggacaacatcctcaagtatgatgaagagggagga
ggagaggaggaccaggactacgacttgagccagctgcagcagccggagtctctggaccac
atcatcaacaagccgacaggggtgcgcagggtggatgagaggcctgtgattgctgagtcg
cagtaccctgtcagacccagcttgccccaccctggagacataggcgacttcataaatgat
ggtctgagggcagcagacaacgaccccaccgctcctccctacgactccctgctggtgttt
gactacgagggcagcggttccaccgccggttctgtcagctcgctcaactccaccagctca
ggggaccaggactacgactacctcaacgactggggcccccgctttaagaagctggctgac
ctctacggaggaggggacgatgactga
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