KEGG   Oreochromis aureus (blue tilapia): 116327107
Entry
116327107         CDS       T07295                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116327107 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oau03019]
    116327107 (rae1)
   03036 Chromosome and associated proteins [BR:oau03036]
    116327107 (rae1)
Messenger RNA biogenesis [BR:oau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116327107 (rae1)
Chromosome and associated proteins [BR:oau03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    116327107 (rae1)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_Nup120_160 Exonuc_X-T_C
Other DBs
NCBI-GeneID: 116327107
NCBI-ProteinID: XP_031604448
Ensembl: ENSOABG00000018970
LinkDB
Position
LG5:10996959..11003898
AA seq 369 aa
MSLFGTSSGFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDGPIKAIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNQNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttgtttggaacaagctcggggtttgggactggagggaccggggtgtttggaagc
acgactacagacagccacaatcccatgaaggatgtcgaagtgacttcacctccagatgac
agcatcagctgcctggctttcagcccacccacaatgcctggaaacttcctcattggagga
tcctgggctaatgatgtccgatgttgggaggtgcaggacaatggacagactgttcccaaa
gcccaacagatgcacacaggtccagtgctggatgcctgctggagtgatgatggaagcaaa
gtcttcacagcttcctgtgacaagacagccaagatgtgggatctcaacagcaatcaagcc
atccagattgcacagcacgatggcccaattaaagcaatccactggatcaaggccccaaac
tacagctgtatcatgactggcagttgggataaaacactgaagttctgggatactcgatct
cccaatcctatgatgtcactgcagatgcctgagagatgctactgtgcagatgttgtgtac
cccatggcagtggttgccacagctgagagaggcctgatagtgtaccaactagagaaccag
ccctctgagtttcgcagaatagactctcctctcaaacatcagcatcgctgtgtggccata
ttcaaggacaagcagaacaagcctacgggttttgcactgggaagcattgaaggccgagtg
gcaatccactatatcaatcctccaaacccagccaaagataacttcaccttcaagtgccac
aggtccaatggaaccaacacaaccactccacaggacatctatgcagtgaatgccatcgcc
ttccatcctgtccatggcactctggctaccgtgggctcagacggacgcttcagcttctgg
gacaaagatgcccgcacaaagttgaagacctcagagcagctcgaccagcccatcacagct
tgctgcttcaaccaaaatggcaacatctttgcgtatgcttctagttacgactggtccaag
ggccatgagtactacaacccccagaaaaagaactacatcttcctgaggaatgccgctgag
gagctgaagcctcggaacaagaaatggtga

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