Oreochromis aureus (blue tilapia): 116327206
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Entry
116327206 CDS
T07295
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oau04990
]
116327206
Domain-containing proteins not elsewhere classified [BR:
oau04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
116327206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
TSP_1
I-set
Ig_2
CarboxypepD_reg
CarbopepD_reg_2
ig
TSP1_spondin
Prok-E2_C
Ig_5
V-set
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
116327206
NCBI-ProteinID:
XP_039465949
Ensembl:
ENSOABG00000015937
LinkDB
All DBs
Position
LG1:20031513..20038006
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AA seq
1164 aa
AA seq
DB search
MSLRCLFIFLGITAATVVTAQGSWRQSDKESRSAVYQTEDNYEWSTWFNVDHPGGRGDYE
QLDAIRFYYRTRVCETPKAIEARTTEWIPARETGETVHADPTVGFWCLNEEQGPQRNCSN
YAVRFLCPKAHNSINIQGTWGPWSDWSPCPALCGQVGVQLRYRNCQSDSLPCSGPKLDGK
ACNGPECPKTACSLQCVMGQANSDCECMCEEHTILGSVRGAGGLAAEGAAILRSGKFITL
TDHNGHFRIPNICPDGNTTLTVRLKGHAPLDVVVPKSSERTSVLSVQLKRAEKLHVLSNP
ESKVRRAGQSAAFCCKVAGTPQPDTYQWFHNNTLMEKESESTLVIRDLRPEQSGEYYCRA
SGPTGAIKTKTATLRILGRDEHSCNPKPESHLIRLPHDCFQNSTNSFYYDVGKCPPSRCA
EQLDNGIRCKDKVAYCCGVAKMEERQLTCQGYQLPTMVVTECGCQKCVDTKAIVHGRAIA
ADNGEPMRFGHIFMNGVRISRTGYKGTFSIQVPQDTERLVLTFVDNMQKFVNTTKVLPFN
TKGGAVYHEIKLLRKKAPVTISSTETNTLELGEVEGQEPMVQIQIPPYSFYKENGEVFTG
NVSASVTFLDPRDISTAAAAQSDLNFIGDEGDTMPLRTYGMFSVDFRGEENNEPLNAGEV
KVSLDSAQVQMSEHLNTMKLWSLNPETGLWEEEGSLQVEKKKRGKREERTFLIGNMEIRE
RRLFNLDVPENRRCYVKVRAFRSERFMPSEQVEGVVISLINMEPKAGYSTNPRAWGRFDS
VVTGPNGACLPAFCDEQRADAYTAYVMANLGGEELEAVPSAPKFNPNLIGVPQPYLGKLN
YMRSDHEDPRVKKTAFSINVAKPSPNTAEEGNGPVYPFENLKECEEAPFSAAHFRFSRVE
GDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYIKVKINSPHEINVRSHNMGGTHP
KTVGQLYGLRDTRSIRDMDQTSVSAVCLEFKCSGMLYDQERVDRTLVKVIPQGSCKRDHV
NSMLQEYLINHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFDG
TSDGTSRVMKTNEGIALTFTCGDREVTRQNVFQTMQRSQGQTVGTSIVRGESRQNRRRQR
ANAPRSSRRRSTRNPEGKRTKARN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaggtgtctgttcatcttcttgggaatcactgcagccactgttgttacagct
caaggatcatggagacaaagtgacaaagagtctaggtctgctgtctaccaaacagaagat
aactatgagtggtcgacatggttcaatgttgatcatcctggaggccgtggagattatgaa
cagctggatgccattcgtttctattaccgtacccgtgtatgcgaaactccaaaggcaatc
gaagccagaaccactgaatggatcccagcgcgtgaaactggggagacggtccatgcagac
ccgactgtgggcttctggtgcctgaatgaagagcaaggtccccagcgcaactgctccaac
tatgcagtccgtttcctatgtccaaaagcacataacagtattaacattcagggaacctgg
gggccatggtcagactggagcccatgtcctgccctctgtggccaagtgggggtgcaactt
cgctatcgaaactgtcaatctgactcgctgccgtgcagtgggccaaaattagatgggaaa
gcatgtaatggacctgagtgcccaaagacagcttgttccctgcagtgtgtgatggggcaa
gcaaactctgactgtgaatgcatgtgtgaagaacacacaattttgggttctgtacgcggc
gctggtggtctcgccgccgaaggggccgccatccttcgctctggcaaattcattaccctt
acagaccacaacggacatttccgcatacccaatatctgccctgatggcaacacaaccctg
actgtcaggctcaagggccatgccccccttgatgttgttgtgcccaagagcagtgagcgc
acctcggtcctcagtgtccagctaaaaagagccgagaaacttcatgtgttgagcaatcct
gaaagcaaggtcaggagggcaggacaaagtgctgccttctgctgcaaagttgcaggaacg
ccacagccggatacataccaatggtttcacaacaacactctcatggagaaggagtcagaa
agcaccttggtcataagagatctgcgtccagagcagtctggagaatactactgcagagca
agtggtccaactggagccattaagactaaaacagctactctcagaatcttaggcagagat
gagcattcatgcaaccctaaacctgaatcccacctcatccgccttccacacgactgcttc
caaaacagtaccaactcattctactacgatgtgggcaagtgtcccccaagtagatgtgct
gaacagctcgacaatggtatcaggtgcaaagacaaagtggcttattgctgcggcgtggca
aaaatggaggaaagacagctaacatgtcagggctaccaactgcccaccatggtggtgacc
gagtgtggctgccagaaatgtgtggacactaaggccattgtgcatggtagggccattgct
gcagacaatggagaaccaatgcggtttggtcatatttttatgaatggagtcagaattagt
cgtacaggttacaaaggaaccttctctatccaagtccctcaagatacagagaggctagta
ttaaccttcgtggacaacatgcagaaatttgtcaacaccacaaaagtgcttccatttaac
accaaaggtggggctgtttaccatgagatcaaacttctcagaaaaaaagcccctgtgaca
atcagctccacagaaaccaatactcttgagctcggggaggtagagggccaggagccaatg
gttcaaatccagattcctccctattccttctataaggaaaatggagaagtcttcacgggt
aacgtcagtgctagtgtaacatttctcgaccccagagacatctccacagctgccgcagct
caaagtgatctgaattttatcggagatgaaggtgataccatgccactgagaacctatggc
atgttttcagttgactttagaggtgaagaaaacaatgagccactcaatgcaggtgaagta
aaagtttcactggactctgctcaggttcagatgtcagagcacctcaacaccatgaagctg
tggtcactgaaccctgaaactggtctgtgggaggaggaggggagtctgcaggtggagaag
aagaaaagaggcaaaagggaggagagaacatttttgattggtaacatggagatcagagaa
agacgtctgtttaacttggacgtcccagagaaccgcaggtgttatgtgaaagtgcgggcc
ttccgcagtgaacggttcatgcccagtgagcaggtggaaggagttgtgatcagtctcata
aatatggagcccaaagctgggtactccaccaatccgcgtgcctggggccgatttgatagt
gtggtcactggtcccaatggagcctgtcttcctgctttctgcgatgaacaaagagctgac
gcctataccgcctatgttatggccaacctcggtggagaggaactggaggctgtcccgtct
gctcccaaattcaatcccaacctcattggagtgcctcagccttatcttggcaaactaaac
tacatgcgatctgaccacgaggaccccagagtgaagaagacagcgttcagcattaatgta
gcaaaaccaagccccaacacagccgaggaaggtaacggaccagtgtacccatttgagaac
ttgaaagaatgtgaggaggccccatttagtgcagcacacttccggttctcaagggtcgaa
ggagatcgctacgattacaacacagtgccatttaatgaagatgaccccatgagctggacg
gaggattacctaagttggtggcccaagcctatggaataccgggcctgctacatcaaggtg
aaaatcaacagcccgcatgagatcaatgtgcggtcccacaacatgggcggcacccatccc
aaaaccgtaggccagctgtacggccttcgagacactcgcagcattcgtgacatggaccag
acatccgtttcagcagtgtgtctggaattcaagtgcagtgggatgctgtacgatcaggaa
cgtgtagatcgtacgctggtgaaggtgatcccacaaggaagctgcaagagagatcatgtc
aactcaatgcttcaggagtatttaatcaaccacctgcccctagctgtcaacaatgacacc
aatgagttcaccatgctggcgcctcttgaccctctgggccataactacggaatttataca
gtgacagaccaggatccccgcacagccaaagagattgcacttggccgctgctttgacggc
acttctgacggcacatctcgggtcatgaaaaccaatgagggcatagcgctaacgtttacc
tgtggagaccgtgaggttacacgccagaacgtctttcaaacaatgcagcgctctcaaggt
cagacagtaggaacaagcattgtgagaggggaaagcaggcagaaccggcgccgccagagg
gcaaacgcaccacgcagcagtcgtagacgtagcaccagaaaccctgagggaaaacgtaca
aaagccagaaactag
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integrated database retrieval system
