Oreochromis aureus (blue tilapia): 116327327
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Entry
116327327 CDS
T07295
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116327327 (mms19)
03400 DNA repair and recombination proteins [BR:
oau03400
]
116327327 (mms19)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116327327 (mms19)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
116327327 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
RTP1_C1
HEAT_ECM29
HEAT_EZ
PP4R3
Sec7-like_HUS
API5
Motif
Other DBs
NCBI-GeneID:
116327327
NCBI-ProteinID:
XP_031604745
Ensembl:
ENSOABG00000015223
LinkDB
All DBs
Position
LG8:22824512..22841366
Genome browser
AA seq
1088 aa
AA seq
DB search
MAAESTLALSLVEEFVSGLQDSKAKDAAKGVKDGKFTVLQLVEALGSSLTSSQPHTRARG
VHLLSEVLQECYGDLTEREGTPFSFHILCWHCTASCKVTNQKCFQITAFLYPYMSSDDAY
SCQGAISTQHFFLFFSTVEVLIAFYENRLKDHYVVTPPVLKGLKALTKCTNLPPGSAVSM
LRSVFQDIHVQSLMLSERACVYSMLINIMETREAELKGLGADFVFGFVQSMDGERDPRNL
LLAFQIAKNLIHGGYDLGKFTEELFEVTSCYFPIDFSPPPNDPHGITREELVQALRAVLT
GTPKFAEFLLPLLIEKLDSDVQSAKLDSLQTLAACVSQYEHKHVAEFLQGLWTSVRREVF
QTSSEKIESAGLAALTALTSCLSRSVLSSDSEDSLSTFLDFILKDCKHHLCEPDLKLVWP
SAKLLQAACSASTRASHIITVAVMPSLLEQYNNRTQCSHRRTLLEVVHRFIHSVKNCQSS
DNDESVLLAFREALCSIVFSALSESNSSLQITATSVLTSLAQQAGLLVESDIELALDHLT
RLLLTEEDDRVSLAVVECAGALAQLHPALVITKLIPKLKKEMFTEPMNQDQEEVSELYSH
HAVRQRCLSALAAVSIQPSVVQESTPVLLEVLRSAHTGSVNFSVDEVVLTCRSLQRIAER
VQDSEEAGRCFHDVFIPHLLSLALQAALQDEGSSGTRSPLVEEVVLSAMVPVISTSCSRL
QPTLAGQTASRAVSLFLDGDVSFLPDNSFPSHMQLLKKQEGDSWSLSRLVCLLMGSVCSL
PRSVEVPQIDKLLSALEEMSCTCSHPLSYTSAAKCFAGLVNKKPQGHSLDSLIQRMMKRV
CSELDSPSSSVRTQAFTLMIWVAKALLLRYHPLFTTLTDKLFSLLDDADLGPMAADGFSL
LMSDSTDVLNRACHADVRIMYRQRFFSENSAKLVQGFNAAPQEKKPNYLKALSNIVNKLP
KQVQVTELPALLSLLLEALSCPDQDVHLSTLSCLEPVLVNPPQVLIQQLEALINRLLALI
SSPAMSVRIASLSCISTLSHFPVHEVLPFRARVLRALAKPLDDKKRLVRREAVQARGEWF
LLGSPGGR
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggagagtaccttggcgctgtctctggtggaggaatttgtgtctggactgcag
gacagcaaggctaaagatgcggcaaaaggtgtcaaagatgggaagtttacagttctgcag
ctggtggaagcactggggtccagtctgaccagttctcagcctcacactcgagcccgagga
gtccatctgctctctgaggttttgcaggagtgctatggagatcttacagagagagaaggt
acacctttctccttccatatactgtgctggcattgtacggcttcgtgcaaagtgacaaat
caaaaatgctttcaaataactgcatttttatatccatatatgtcttccgatgacgcttat
tcatgtcaaggggcgatcagcactcagcatttcttcctgttcttctccacagtggaagtg
ctcattgccttctatgaaaaccgtctgaaggatcattatgtcgtcacacctcccgtctta
aaggggctcaaggcgctgacaaaatgtacaaacctgcctcctggctcagctgtgtccatg
ctgaggtcagtgttccaggacatccatgtacagtctctgatgctatcagagagagcatgt
gtctacagcatgcttatcaacatcatggagaccagagaggcggagcttaagggtttgggt
gccgactttgtcttcggttttgtgcagtccatggacggggagcgagatcctcgcaacctc
ttgttggcctttcagattgccaaaaacctaattcacggaggctatgatctcggtaaattc
acagaggagctgtttgaagtgacgtcctgctatttcccaatcgacttctctccacctcct
aatgacccacatggcatcaccagggaggaactggttcaggcgctgagggccgtccttact
gggactccaaagtttgcagagtttctcttacctctcctcatcgagaagctggactcagac
gttcagagtgcaaagctggactcgctgcagactctggctgcttgtgtgtcacagtatgaa
cataagcatgtggctgaattcctgcagggactgtggacatcagtacgcagagaggtgttt
caaacctccagcgagaagattgagtctgcaggcctcgctgctcttaccgcactcacttcc
tgtctctctcgctcagtcctcagctctgactctgaggactccctcagcacattcctggat
ttcattctcaaagactgcaaacatcacctgtgtgaaccagacttaaagcttgtatggccg
agcgctaagctcctccaagccgcctgcagcgcctccaccagggcgagtcacatcattaca
gttgctgtcatgccctctctgcttgagcaatataacaacagaacacagtgttcccataga
aggacattactggaggtggtgcaccgatttatccattcagtaaaaaactgccagtcttca
gataatgatgagagtgtgcttttagccttccgagaagctctgtgcagcatcgtgttttcg
gctctctctgagagcaactccagcctgcagatcactgccacctctgtgctcacatcactg
gcacaacaagcaggtctgctggtagaatctgatattgagctagctctcgatcatctgacc
agactgctgctgactgaagaggatgacagagtcagtcttgctgtggtggagtgtgctgga
gccttagcgcagctgcacccggcactcgtcatcactaaactgattccaaaactaaagaaa
gagatgtttactgagcccatgaatcaagaccaagaggaggtttctgaactatattcccat
catgcagtgcgtcagcggtgtctgtcagctctggctgcagtgtccatccaacccagtgtt
gtccaagagagcacacctgtcctcctggaggtccttcgttcagcacacacaggtagtgtt
aatttttcggtggatgaggtggtgttgacgtgccgcagccttcagagaatagcagagcgg
gtccaggacagcgaggaagcggggcgctgcttccacgacgtcttcatcccacacctgttg
tctctggcactccaggcagcactgcaggatgagggatcatctggaactcgtagtcctctg
gtagaggaggtggtcctgtctgccatggttcctgtcatcagcacttcctgctccagactg
cagcccacgctggcggggcagacggcgtcgagagctgtctctctcttcctggatggcgat
gtctcatttttgcctgacaactcgttcccttcacacatgcagcttctcaagaagcaggag
ggggattcctggagcctgtctcggctggtttgtctgcttatgggcagtgtgtgttctcta
cctcgcagcgtggaggtgccccagatcgacaaactgctgtcggcactggaggagatgagc
tgcacctgcagccacccgctgtcatacacgtcggctgcaaagtgctttgctggcctggtc
aacaagaaaccacagggacattccctcgacagcctaattcagaggatgatgaagagagtg
tgcagcgagctggactcaccttcctcctctgttcgcactcaggccttcacacttatgatc
tgggttgccaaggctctgcttctgcgataccaccctctgttcacaacactgaccgacaag
ctcttctctctgctcgacgatgctgatttaggtccgatggcggcagacggcttctctctg
ctcatgagcgactccactgacgtactgaaccgagcttgccacgctgatgtacgcatcatg
taccgccagcgcttcttcagcgagaactcagccaagctggtgcaaggctttaacgctgca
ccacaagagaagaagcccaactacctgaaagctctgtctaacatcgtcaataagctgccc
aagcaggttcaagtcactgaacttccagcgcttctttctctgctgctggaggccttgtcg
tgtcctgatcaggacgttcatctgtcaactctgtcctgtctggagcccgtcctcgtcaac
ccaccacaagttctcatacagcagctggaagctttgatcaacaggctgttggccctcatc
tccagtccagctatgagtgtacggattgcttcgctgtcctgcatcagcactctttcccac
ttccctgtacatgaggtgttgccgtttcgggcccgagtgcttcgagcgctcgccaaacct
ctggatgacaagaagaggctggtgaggagagaggcggttcaggccagaggagagtggttc
ctcttaggaagtcctggtggaagatga
DBGET
integrated database retrieval system
