Oreochromis aureus (blue tilapia): 116327602
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Entry
116327602 CDS
T07295
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116327602 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116327602 (cnot2)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116327602 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116327602 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
116327602
NCBI-ProteinID:
XP_031605080
Ensembl:
ENSOABG00000001101
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Position
LG7:complement(4640426..4652343)
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AA seq
521 aa
AA seq
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MFGARKKFVEFVDVDNDFTDESMYYNQPTMFPHRSDKDMLSSPSPSSSGQLSQLGASLYG
PQSALGFSVRGMGNNTPQLNRSLTQGSQLPSHITPTTGVPTMSLHTPPSPSRGTLPMNSR
NVLNHSQVGQSIGISGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGMN
RNQAFMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRSRREGTGNPTPVLNPLTGRAPY
VGMVTKPSTEQTQDFSIHNEDFPALPGPNYKDPTLNNDDSKTNLNSTNKSTSNADGPKFP
GDKTASAQNNNQKKGIQVLPDGRVTNIPAGMVTDQFGMIGLLTFIRAAETDPGMVHLALG
SDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLSRY
GEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTY
YFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttgtagagttcgttgacgtcgataacgactttaccgat
gaaagcatgtactacaaccagccgacgatgtttccacatcggtcggataaagatatgctg
tcctctccctcaccatcgtcatcgggtcagctgtcgcagctcggtgcgagtttatatggt
ccacaaagtgcactcggcttctcagtaagaggcatgggaaacaacacacctcagttaaac
cgaagtctaacgcaaggctcgcagctaccgagtcatatcacccccacaacaggggttccc
accatgtctctccataccccaccatcaccaagcagggggacgttaccgatgaattcgagg
aacgtgctgaatcactctcaggtcggtcaaagcattgggataagtggcaggaccaacagc
atgggcagctcggggctgggaagccccaaccgtagctcacccagtatcatctgtatgccc
aaacagcagccagcacgccagccctttactataaacagcatgtcaggatttggtatgaac
cgcaatcaagctttcatgaacaactcgttatcaagcaacatcttcaacggcacagatggg
agtgaaaatgtaacaggactggatttgtcagacttccctgcattagcagataggagtcgg
agagaagggaccggaaaccctacaccagttctcaacccactgactggacgagctccttat
gttggcatggtgacaaagccatcgactgagcagacacaggatttctccatccacaatgag
gacttccctgcactgcctgggccaaactataaggatcccacgttaaacaacgatgacagc
aaaactaacttgaactccacaaacaagagcacatccaatgcagatgggcccaagttcccc
ggagacaagacagcctcagcacagaacaacaaccagaagaaagggattcaggtgttgccc
gatggtcgggtgacgaacattcccgcaggaatggtgacggatcaatttggcatgattggc
ctactgacgtttatccgggcagcagagactgatccggggatggtccatctggcattagga
agtgacctcacaacactgggactcaacttaaactcaccagaaaacttgtaccccaagttt
gcctctccttgggcttccgcaccttgtcgacctcaagacatcgacttccatgttccatcg
gagtatttaacaaatatccacataagggacaagttggctgccatcaaactgtctcgatac
ggtgaagacctgttattctacctgtactacatgaatggaggagatctgctacaacttctg
gcagcagtggagctctttaaccgggactggaggtaccacaaagaggaacgggtttggata
actagggcacctggcatggagcctacactgaagacaaacacctatgagaggggtacctac
tacttttttgattgtcttaactggaggaaagtagccaaggaatttcatctggagtacgac
aagctggaagagaggcctcacgtgccaacaacattcaactacaacccagcccagcaggcc
ttctaa
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